Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A514T27 Lonicera japonica HOM05D003351 ORTHO05D003806 4.3e-147 524.6 265 100.0
Lj9A583T62 Lonicera japonica HOM05D003351 ORTHO05D003806 3.6e-93 345.5 262 69.5
Dinv43809 Davidia involucrata HOM05D003351 ORTHO05D003806 8.0e-93 344.4 262 69.8
Lsat_1_v5_gn_7_4420 Lactuca sativa HOM05D003351 ORTHO05D003806 9.8e-91 337.4 260 68.8
CSS0020727 Camellia sinensis var. sinensis HOM05D003351 ORTHO05D003806 4.9e-90 335.1 262 66.8
GSVIVG01026913001 Vitis vinifera HOM05D003351 ORTHO05D003806 6.3e-90 334.7 262 67.2
Prupe.2G169700 Prunus persica HOM05D003351 ORTHO05D003806 1.4e-89 333.6 262 65.3
ECA236G4888 Erigeron canadensis HOM05D003351 ORTHO05D003806 2.4e-89 332.8 261 67.4
HanXRQChr06g0170081 Helianthus annuus HOM05D003351 ORTHO05D003806 2.0e-88 329.7 261 66.3
Cc02_g37920 Coffea canephora HOM05D003351 ORTHO05D003806 3.5e-88 328.9 262 66.0
Manes.05G035200 Manihot esculenta HOM05D003351 ORTHO05D003806 3.5e-88 328.9 262 66.0
Actinidia33422 Actinidia chinensis HOM05D003351 ORTHO05D003806 7.8e-88 327.8 262 66.8
MD01G1058600 Malus domestica HOM05D003351 ORTHO05D003806 1.3e-87 327.0 262 64.9
FvH4_7g14192 Fragaria vesca HOM05D003351 ORTHO05D003806 2.9e-87 325.9 262 64.9
DCAR_025188 Daucus carota HOM05D003351 ORTHO05D003806 3.3e-86 322.4 262 66.0
CANSAT56G4221 Cannabis sativa HOM05D003351 ORTHO05D003806 1.2e-85 320.5 262 62.6
Solyc01g094550.3 Solanum lycopersicum HOM05D003351 ORTHO05D003806 2.1e-85 319.7 262 66.4
Sopen01g038360 Solanum pennellii HOM05D003351 ORTHO05D003806 2.1e-85 319.7 262 66.4
CiPaw.01G060600 Carya illinoinensis HOM05D003351 ORTHO05D003806 3.6e-85 318.9 262 63.0
Atru.chr5.459 Acer truncatum HOM05D003351 ORTHO05D003806 4.7e-85 318.5 262 63.7
DCAR_015970 Daucus carota HOM05D003351 ORTHO05D003806 4.0e-84 315.5 262 64.9
Eucgr.E00141 Eucalyptus grandis HOM05D003351 ORTHO05D003806 5.2e-84 315.1 262 60.3
PGSC0003DMG400000166 Solanum tuberosum HOM05D003351 ORTHO05D003806 5.2e-84 315.1 262 65.6
Nn6g33439 Nelumbo nucifera HOM05D003351 ORTHO05D003806 8.9e-84 314.3 262 63.0
Sed0024794 Sechium edule HOM05D003351 ORTHO05D003806 8.9e-84 314.3 262 61.1
AUR62004348 Chenopodium quinoa HOM05D003351 ORTHO05D003806 2.6e-83 312.8 262 62.6
RcHm_v2.0_Chr1g0355121 Rosa chinensis HOM05D003351 ORTHO05D003806 2.6e-83 312.8 262 63.7
Migut.N01442 Erythranthe guttata HOM05D003351 ORTHO05D003806 4.4e-83 312.0 257 65.0
Ciclev10020242m.g Citrus clementina HOM05D003351 ORTHO05D003806 7.5e-83 311.2 264 62.1
Gohir.A11G088400 Gossypium hirsutum HOM05D003351 ORTHO05D003806 9.8e-83 310.8 262 62.2
TWI59G0062 Tripterygium wilfordii HOM05D003351 ORTHO05D003806 9.8e-83 310.8 263 62.4
Sed0019127 Sechium edule HOM05D003351 ORTHO05D003806 1.3e-82 310.5 262 59.9
Sabra14G0060600 Salix brachista HOM05D003351 ORTHO05D003806 1.7e-82 310.1 262 60.7
FAN10G4309 Fragaria x ananassa HOM05D003351 ORTHO05D003806 3.7e-82 308.9 262 63.7
Lj1g0000541 Lotus japonicus HOM05D003351 ORTHO05D003806 3.7e-82 308.9 262 61.8
Solyc01g094530.4 Solanum lycopersicum HOM05D003351 ORTHO05D003806 4.9e-82 308.5 262 64.5
EL10Ac1g00424 Beta vulgaris HOM05D003351 ORTHO05D003806 6.4e-82 308.1 262 63.4
MSTRG.4857 Avicennia marina HOM05D003351 ORTHO05D003806 8.3e-82 307.8 262 62.6
Potri.014G083300 Populus trichocarpa HOM05D003351 ORTHO05D003806 1.4e-81 307.0 262 59.9
Glyma.03G009800 Glycine max HOM05D003351 ORTHO05D003806 1.9e-81 306.6 262 61.1
Duzib133G0362 Durio zibethinus HOM05D003351 ORTHO05D003806 2.4e-81 306.2 262 61.1
Nitab4.5_0005277g0030 Nicotiana tabacum HOM05D003351 ORTHO05D003806 2.4e-81 306.2 268 62.7
Glyma.07G071300 Glycine max HOM05D003351 ORTHO05D003806 7.0e-81 304.7 262 60.7
Gorai.007G099000 Gossypium raimondii HOM05D003351 ORTHO05D003806 7.0e-81 304.7 257 61.9
Sopen01g038340 Solanum pennellii HOM05D003351 ORTHO05D003806 9.2e-81 304.3 262 63.7
Aa31LG1G11070 Aethionema arabicum HOM05D003351 ORTHO05D003806 1.2e-80 303.9 262 61.8
Manes.01G257800 Manihot esculenta HOM05D003351 ORTHO05D003806 1.2e-80 303.9 262 61.5
PSO478G5134 Papaver somniferum HOM05D003351 ORTHO05D003806 1.2e-80 303.9 261 61.3
Thhalv10007689m.g Eutrema salsugineum HOM05D003351 ORTHO05D003806 1.6e-80 303.5 262 61.5
PSO782G5283 Papaver somniferum HOM05D003351 ORTHO05D003806 1.6e-80 303.5 261 61.3
FAN06G3044 Fragaria x ananassa HOM05D003351 ORTHO05D003806 2.0e-80 303.1 262 62.6
SalBow5G0930 Salvia bowleyana HOM05D003351 ORTHO05D003806 2.0e-80 303.1 262 62.2
SalBow5G3927 Salvia bowleyana HOM05D003351 ORTHO05D003806 2.0e-80 303.1 262 62.2
SGA_v2.0_scaffold43G16419 Striga asiatica HOM05D003351 ORTHO05D003806 2.7e-80 302.8 262 61.8
Duzib138G1725 Durio zibethinus HOM05D003351 ORTHO05D003806 3.5e-80 302.4 259 61.8
Thecc.01G360000 Theobroma cacao HOM05D003351 ORTHO05D003806 6.0e-80 301.6 262 61.5
Glyma.18G232000 Glycine max HOM05D003351 ORTHO05D003806 1.0e-79 300.8 261 61.7
Glyma.09G260200 Glycine max HOM05D003351 ORTHO05D003806 1.3e-79 300.4 261 60.9
BraA10t42310Z Brassica rapa HOM05D003351 ORTHO05D003806 1.7e-79 300.1 262 61.1
Phvul.010G098200 Phaseolus vulgaris HOM05D003351 ORTHO05D003806 1.7e-79 300.1 262 59.5
VMungo0331G1844 Vigna mungo HOM05D003351 ORTHO05D003806 1.7e-79 300.1 262 59.5
Medtr7g077400 Medicago truncatula HOM05D003351 ORTHO05D003806 3.0e-79 299.3 262 59.9
Sp1g00600 Schrenkiella parvula HOM05D003351 ORTHO05D003806 3.0e-79 299.3 262 60.7
THA.LOC104814102 Tarenaya hassleriana HOM05D003351 ORTHO05D003806 8.6e-79 297.7 264 60.6
Sc23g0002940 Simmondsia chinensis HOM05D003351 ORTHO05D003806 1.1e-78 297.4 262 60.3
AL1G10650 Arabidopsis lyrata HOM05D003351 ORTHO05D003806 2.5e-78 296.2 262 59.5
AT1G01710 Arabidopsis thaliana HOM05D003351 ORTHO05D003806 3.3e-78 295.8 262 59.5
arahy.Tifrunner.gnm1.ann1.UANN5Y Arachis hypogaea HOM05D003351 ORTHO05D003806 3.3e-78 295.8 259 60.2
DCAR_006927 Daucus carota HOM05D003351 ORTHO05D003806 4.3e-78 295.4 262 62.2
CsaV3_3G008950 Cucumis sativus L. HOM05D003351 ORTHO05D003806 5.6e-78 295.0 262 59.2
TPR.G37800 Trifolium pratense HOM05D003351 ORTHO05D003806 5.6e-78 295.0 262 60.3
Phvul.008G065700 Phaseolus vulgaris HOM05D003351 ORTHO05D003806 9.5e-78 294.3 261 60.9
MELO3C006113.2 Cucumis melo HOM05D003351 ORTHO05D003806 2.8e-77 292.7 262 59.2
BolC5t28825H Brassica oleracea HOM05D003351 ORTHO05D003806 2.3e-76 289.7 257 60.7
Lalb_Chr19g0126951 Lupinus albus HOM05D003351 ORTHO05D003806 4.0e-76 288.9 262 59.2
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 5.2e-76 288.5 257 60.3
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 1.2e-75 287.3 257 60.3
Carub.0001s0050 Capsella rubella HOM05D003351 ORTHO05D003806 1.2e-75 287.3 262 58.4
Psat4g154520 Pisum sativum HOM05D003351 ORTHO05D003806 2.6e-75 286.2 258 57.0
Aqoxy7G00326 Aquilegia oxysepala HOM05D003351 ORTHO05D003806 1.3e-74 283.9 257 59.1
Lalb_Chr19g0126941 Lupinus albus HOM05D003351 ORTHO05D003806 8.3e-74 281.2 256 58.6
ATR0680G356 Amborella trichopoda HOM05D003351 ORTHO05D003806 1.4e-73 280.4 262 56.1
Lj3g0018331 Lotus japonicus HOM05D003351 ORTHO05D003806 3.2e-73 279.3 262 55.0
Ca_23637_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 5.4e-73 278.5 260 55.0
Psat0s3577g0160 Pisum sativum HOM05D003351 ORTHO05D003806 7.0e-73 278.1 262 56.1
ClCG05G001560 Citrullus lanatus HOM05D003351 ORTHO05D003806 3.5e-72 275.8 246 58.9
CDE11G0862 Ceratophyllum demersum HOM05D003351 ORTHO05D003806 1.0e-71 274.2 262 56.5
CAN.G78.59 Capsicum annuum HOM05D003351 ORTHO05D003806 3.9e-71 272.3 226 64.6
Medtr8g030920 Medicago truncatula HOM05D003351 ORTHO05D003806 3.3e-70 269.2 258 54.7
PSO478G2412 Papaver somniferum HOM05D003351 ORTHO05D003806 5.6e-70 268.5 264 55.7
Rhsim13G0014400 Rhododendron simsii HOM05D003351 ORTHO05D003806 6.2e-69 265.0 239 61.1
Os04g0558400 Oryza sativa ssp. japonica HOM05D003351 ORTHO05D003806 8.1e-69 264.6 264 56.1
Peaxi162Scf00020g00237 Petunia axillaris HOM05D003351 ORTHO05D003806 1.8e-68 263.5 239 61.1
CARHR248670 Cardamine hirsuta HOM05D003351 ORTHO05D003806 4.0e-68 262.3 262 54.2
PSO478G3804 Papaver somniferum HOM05D003351 ORTHO05D003806 7.5e-67 258.1 264 53.0
AUR62022554 Chenopodium quinoa HOM05D003351 ORTHO05D003806 9.9e-67 257.7 226 59.3
Lalb_Chr17g0339681 Lupinus albus HOM05D003351 ORTHO05D003806 1.3e-66 257.3 264 54.2
PSO782G0254 Papaver somniferum HOM05D003351 ORTHO05D003806 1.3e-66 257.3 264 53.0
Gohir.D11G092700 Gossypium hirsutum HOM05D003351 ORTHO05D003806 2.9e-66 256.1 261 54.4
Aa31LG5G470 Aethionema arabicum HOM05D003351 ORTHO05D003806 6.4e-66 255.0 262 53.4
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 1.9e-65 253.4 231 58.0
PSO063G6511 Papaver somniferum HOM05D003351 ORTHO05D003806 5.4e-65 251.9 264 53.8
Thhalv10029128m.g Eutrema salsugineum HOM05D003351 ORTHO05D003806 9.2e-65 251.1 262 51.9
Psat0s3832g0080 Pisum sativum HOM05D003351 ORTHO05D003806 4.6e-64 248.8 265 50.9
COL.COLO4_12706 Corchorus olitorius HOM05D003351 ORTHO05D003806 1.3e-63 247.3 266 53.0
Sp6g00550 Schrenkiella parvula HOM05D003351 ORTHO05D003806 2.5e-62 243.0 264 51.1
FAN01G2146 Fragaria x ananassa HOM05D003351 ORTHO05D003806 4.3e-62 242.3 212 60.8
PSO782G2636 Papaver somniferum HOM05D003351 ORTHO05D003806 5.6e-62 241.9 250 52.8
Ah.05g180660 Amaranthus hybridus HOM05D003351 ORTHO05D003806 7.3e-62 241.5 268 51.5
FAN06G4684 Fragaria x ananassa HOM05D003351 ORTHO05D003806 8.1e-61 238.0 293 49.8
AL6G52960 Arabidopsis lyrata HOM05D003351 ORTHO05D003806 1.8e-60 236.9 261 49.8
A03p32150 Brassica napus HOM05D003351 ORTHO05D003806 4.0e-60 235.7 262 49.6
BraA03t12385Z Brassica rapa HOM05D003351 ORTHO05D003806 6.8e-60 235.0 262 49.6
BcaB01g02197 Brassica carinata HOM05D003351 ORTHO05D003806 8.9e-60 234.6 267 49.8
Aa31LG5G460 Aethionema arabicum HOM05D003351 ORTHO05D003806 2.6e-59 233.0 259 51.0
BolC3t16188H Brassica oleracea HOM05D003351 ORTHO05D003806 7.6e-59 231.5 262 48.5
Lsat_1_v5_gn_7_4460 Lactuca sativa HOM05D003351 ORTHO05D003806 1.7e-58 230.3 259 51.0
BraA02t07405Z Brassica rapa HOM05D003351 ORTHO05D003806 2.2e-58 229.9 261 48.3
C02p38000 Brassica napus HOM05D003351 ORTHO05D003806 1.1e-57 227.6 281 45.9
HanXRQChr04g0121471 Helianthus annuus HOM05D003351 ORTHO05D003806 1.9e-57 226.9 195 60.5
BcaC03g16040 Brassica carinata HOM05D003351 ORTHO05D003806 3.2e-57 226.1 284 45.4
BolC2t09816H Brassica oleracea HOM05D003351 ORTHO05D003806 9.2e-57 224.6 284 44.7
C03p39170 Brassica napus HOM05D003351 ORTHO05D003806 1.2e-56 224.2 257 48.2
QL08p048955 Quercus lobata HOM05D003351 ORTHO05D003806 1.6e-56 223.8 200 58.0
TPR.G14856 Trifolium pratense HOM05D003351 ORTHO05D003806 3.5e-56 222.6 258 47.3
BcaC01g06871 Brassica carinata HOM05D003351 ORTHO05D003806 6.0e-56 221.9 257 47.5
TAR374G1710 Trochodendron aralioides HOM05D003351 ORTHO05D003806 1.7e-55 220.3 206 56.8
HanXRQChr06g0170071 Helianthus annuus HOM05D003351 ORTHO05D003806 3.0e-55 219.5 261 50.2
HPP92_008506 Vanilla planifolia HOM05D003351 ORTHO05D003806 8.7e-55 218.0 262 48.5
QL08p048991 Quercus lobata HOM05D003351 ORTHO05D003806 4.3e-54 215.7 137 78.1
Hund16926 Selenicereus undatus HOM05D003351 ORTHO05D003806 3.6e-53 212.6 264 48.9
vmacro23203 Vaccinium macrocarpon HOM05D003351 ORTHO05D003806 4.8e-53 212.2 220 57.3
Nitab4.5_0008002g0030 Nicotiana tabacum HOM05D003351 ORTHO05D003806 3.4e-51 206.1 176 64.8
arahy.Tifrunner.gnm1.ann1.M409IX Arachis hypogaea HOM05D000404 ORTHO05D002003 2.9e-50 203.0 191 56.5
BcaNung05354 Brassica carinata HOM05D003351 ORTHO05D003806 6.4e-50 201.8 274 44.9
Cpa.g.sc18.250 Carica papaya HOM05D003351 ORTHO05D003806 1.1e-49 201.1 137 70.1
Glyma.18G232200 Glycine max HOM05D003351 ORTHO05D003806 2.4e-49 199.9 137 71.5
AT4G00520 Arabidopsis thaliana HOM05D003351 ORTHO05D003806 2.7e-48 196.4 227 48.0
A02p24120 Brassica napus HOM05D003351 ORTHO05D003806 2.3e-47 193.4 332 37.7
Psat0s3577g0040 Pisum sativum HOM05D003351 ORTHO05D003806 3.0e-47 193.0 176 56.8
Ca_07910_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 5.1e-47 192.2 137 67.9
BcaB01g02157 Brassica carinata HOM05D003351 ORTHO05D003806 1.5e-46 190.7 261 42.9
Hund27282 Selenicereus undatus HOM05D003351 ORTHO05D003806 3.6e-45 186.0 265 43.8
HanXRQChr04g0121601 Helianthus annuus HOM05D003351 ORTHO05D003806 8.1e-45 184.9 133 69.2
Pp3c14_7450 Physcomitrium patens HOM05D003351 ORTHO05D003806 3.1e-44 183.0 258 42.6
MD01G1058500 Malus domestica HOM05D003351 ORTHO05D003806 3.8e-42 176.0 173 56.1
Psat0s3832g0040 Pisum sativum HOM05D003351 ORTHO05D003806 3.5e-40 169.5 176 52.8
SMO147G0381 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 5.1e-39 165.6 261 38.7
HanXRQChr04g0121591 Helianthus annuus HOM05D003351 ORTHO05D003806 3.3e-38 162.9 179 52.5
Pp3c12_25760 Physcomitrium patens HOM05D003351 ORTHO05D003806 1.1e-36 157.9 262 35.9
Pp3c10_19190 Physcomitrium patens HOM05D003351 ORTHO05D003806 3.4e-35 152.9 266 35.0
AagrBONN_evm.TU.Sc2ySwM_228.998 Anthoceros agrestis HOM05D003351 ORTHO05D003806 1.4e-33 147.5 227 42.3
TPR.G15034 Trifolium pratense HOM05D003351 ORTHO05D003806 1.4e-33 147.5 107 64.5
Carub.0006s3675 Capsella rubella HOM05D003351 ORTHO05D003806 2.5e-33 146.7 111 62.2
Mapoly0016s0008 Marchantia polymorpha HOM05D003351 ORTHO05D003806 2.7e-32 143.3 273 37.7
MD01G1058300 Malus domestica HOM05D003351 ORTHO05D003806 4.6e-32 142.5 97 70.1
BcaC04g24162 Brassica carinata HOM05D003351 ORTHO05D003806 1.8e-28 130.6 257 37.7
QL08p048978 Quercus lobata HOM05D003351 ORTHO05D003806 1.5e-27 127.5 103 61.2
arahy.Tifrunner.gnm1.ann1.74NP28 Arachis hypogaea HOM05D003351 ORTHO05D003806 7.6e-27 125.2 114 57.0
arahy.Tifrunner.gnm1.ann1.CI504D Arachis hypogaea HOM05D003351 ORTHO05D003806 3.8e-26 122.9 89 65.2
MD01G1059100 Malus domestica HOM05D003351 ORTHO05D003806 5.0e-26 122.5 125 52.0
Haze_15493 Corylus avellana HOM05D003351 ORTHO05D003806 2.5e-25 120.2 84 69.0
SMO147G0373 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 1.8e-23 114.0 132 44.7
AagrBONN_evm.TU.Sc2ySwM_228.1010 Anthoceros agrestis HOM05D003351 ORTHO05D003806 4.3e-22 109.4 105 54.3
TPR.G40156 Trifolium pratense HOM05D003351 ORTHO05D003806 5.7e-22 109.0 124 47.6
Glyma.18G232300 Glycine max HOM05D003351 ORTHO05D003806 7.4e-22 108.6 87 63.2
CiPaw.01G060500 Carya illinoinensis HOM05D003351 ORTHO05D003806 2.2e-21 107.1 92 58.7
Ca_27001_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 2.4e-20 103.6 108 53.7
Psat0s3577g0120 Pisum sativum HOM05D003351 ORTHO05D003806 4.1e-20 102.8 87 59.8
SEGI_17243 Sequoiadendron giganteum HOM05D003351 ORTHO05D003806 4.1e-20 102.8 87 57.5
HanXRQChr04g0103041 Helianthus annuus HOM05D003351 ORTHO05D003806 2.1e-16 90.5 68 72.1
SMO147G0196 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 3.6e-16 89.7 77 61.0
MD01G1059000 Malus domestica HOM05D003351 ORTHO05D003806 7.4e-14 82.0 89 51.7
SHI13440 Sapria himalayana HOM05D003351 ORTHO05D003806 1.1e-12 78.2 61 65.6
SMO273G0019 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 1.2e-11 74.7 69 59.4
Cfa022652 Carpinus fangiana HOM05D003351 ORTHO05D003806 2.6e-11 73.6 103 42.7
PRCOL_00006030 Prasinoderma coloniale HOM05D003351 ORTHO05D003806 7.7e-11 72.0 130 34.6
BcaB01g02160 Brassica carinata HOM05D003351 ORTHO05D003806 1.0e-10 71.6 88 47.7
Zm00001eb429310 Zea mays HOM05D003351 ORTHO05D003806 1.1e-09 68.2 55 65.5
QL08p048969 Quercus lobata HOM05D003351 ORTHO05D003806 1.0e-07 61.6 42 69.0
CAN.G78.57 Capsicum annuum HOM05D003351 ORTHO05D003806 3.0e-07 60.1 40 75.0
SEGI_22600 Sequoiadendron giganteum HOM05D003351 ORTHO05D003806 3.3e-06 56.6 42 59.5
CARHR000630 Cardamine hirsuta HOM05D003351 ORTHO05D003806 4.4e-06 56.2 57 43.9
Potri.002G159150 Populus trichocarpa HOM05D003351 ORTHO05D003806 5.7e-06 55.8 41 53.7
CBR_g48193 Chara braunii HOM05D001353 ORTHO05D013162 9.7e-06 55.1 103 34.0


User provided reference genes

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