Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 1.2e-126 456.4 225 100.0
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 5.1e-40 168.7 236 40.7
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 4.1e-37 159.1 199 45.7
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 4.1e-37 159.1 195 49.2
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 9.0e-37 157.9 215 50.2
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 9.0e-37 157.9 239 41.8
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 9.0e-37 157.9 235 40.9
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 3.4e-36 156.0 238 40.3
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 2.2e-35 153.3 224 42.0
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 6.5e-35 151.8 192 46.9
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 3.5e-33 146.0 227 42.3
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 1.0e-32 144.4 239 39.7
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 1.3e-32 144.1 232 38.4
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.3e-32 144.1 237 40.5
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 3.0e-32 142.9 243 37.4
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 3.0e-32 142.9 243 37.4
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 5.1e-32 142.1 230 42.2
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 6.7e-32 141.7 243 37.0
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 3.1e-29 132.9 227 39.6
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 6.9e-29 131.7 191 44.5
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 1.5e-28 130.6 238 37.8
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 5.9e-28 128.6 179 43.0
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 1.1e-26 124.4 196 39.8
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 2.1e-25 120.2 147 46.9
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 4.6e-25 119.0 164 47.6
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 3.0e-24 116.3 221 36.2
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 3.9e-24 115.9 199 36.7
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 2.5e-23 113.2 237 34.2
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 1.3e-22 110.9 219 37.0
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 8.2e-22 108.2 219 36.5
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 1.4e-21 107.5 219 37.4
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 2.4e-21 106.7 195 36.4
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 6.9e-21 105.1 203 36.5
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 9.1e-21 104.8 221 35.7
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.2e-20 104.4 221 36.2
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.5e-20 104.0 191 36.6
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.0e-20 103.6 217 35.0
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 1.9e-18 97.1 118 45.8
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 3.6e-17 92.8 104 52.9
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 4.7e-17 92.4 102 48.0
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 6.1e-17 92.0 73 60.3
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 3.9e-16 89.4 151 39.7
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 9.7e-15 84.7 199 33.7
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 5.9e-12 75.5 71 50.7
Actinidia10102 Actinidia chinensis HOM05D008545 ORTHO05D010341 3.8e-11 72.8 120 44.2
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 3.8e-11 72.8 109 38.5
SalBow3G1564 Salvia bowleyana HOM05D008545 ORTHO05D010341 6.5e-11 72.0 138 36.2
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 7.2e-10 68.6 153 31.4
DCAR_008649 Daucus carota HOM05D008545 ORTHO05D010341 2.1e-09 67.0 258 30.2
SGA_v2.0_scaffold548G52844 Striga asiatica HOM05D046447 ORTHO05D010341 3.6e-09 66.2 113 35.4
Cpa.g.sc194.12 Carica papaya HOM05D008545 ORTHO05D010341 1.8e-08 63.9 80 43.8
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.3e-08 63.5 167 30.5
Oeu007845.1 Olea europaea HOM05D008545 ORTHO05D010341 3.0e-08 63.2 184 28.3
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 6.7e-08 62.0 127 31.5


User provided reference genes

Program Settings