Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 2.0e-181 639.0 338 100.0
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.2e-77 294.3 283 61.1
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 5.8e-64 248.8 301 53.8
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 3.0e-60 236.5 297 50.2
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 6.5e-55 218.8 339 44.5
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 8.5e-55 218.4 307 50.5
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 8.5e-55 218.4 290 51.7
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 8.5e-55 218.4 341 46.9
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 2.5e-54 216.9 342 47.1
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.2e-53 214.5 364 45.1
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 4.6e-53 212.6 314 48.4
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.0e-52 211.5 307 47.9
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.3e-52 210.3 308 48.1
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 2.5e-51 206.8 309 48.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 5.7e-51 205.7 341 45.5
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.2e-50 203.8 305 46.6
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 2.8e-50 203.4 349 44.4
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.8e-49 200.7 352 43.2
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 3.1e-49 199.9 303 46.5
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 9.1e-49 198.4 227 55.5
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.2e-48 198.0 292 49.3
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.2e-48 198.0 375 42.9
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 4.5e-48 196.1 355 43.1
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 5.0e-47 192.6 375 42.7
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.1e-46 191.4 349 42.7
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 2.5e-46 190.3 351 43.6
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 3.2e-46 189.9 215 59.1
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 3.6e-45 186.4 291 46.4
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 4.6e-45 186.0 324 44.1
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.1e-45 185.7 353 42.2
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.0e-44 184.9 296 44.9
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.8e-44 184.1 292 45.9
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.9e-44 183.0 293 47.1
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.1e-44 182.6 357 42.3
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 5.1e-44 182.6 336 43.5
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 1.1e-43 181.4 294 44.2
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.1e-43 181.4 385 39.0
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.1e-43 181.4 292 45.2
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.5e-43 181.0 218 52.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.0e-43 180.6 300 45.7
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.3e-43 179.9 368 41.6
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 4.4e-43 179.5 291 45.0
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 4.4e-43 179.5 335 42.1
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 5.7e-43 179.1 260 45.8
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.3e-42 177.9 332 40.7
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.7e-42 177.6 371 40.4
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 1.7e-42 177.6 292 44.9
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.2e-42 177.2 305 46.6
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 2.2e-42 177.2 307 42.7
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 2.8e-42 176.8 312 43.9
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 4.8e-42 176.0 305 46.6
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.2e-42 175.3 367 40.6
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 4.1e-41 172.9 397 38.3
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.0e-40 170.6 367 40.1
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 2.6e-40 170.2 342 39.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 3.4e-40 169.9 292 43.5
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.3e-39 167.9 341 37.5
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 3.8e-39 166.4 316 41.5
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.1e-38 164.9 309 43.4
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.4e-38 164.5 252 45.6
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 5.5e-38 162.5 366 39.1
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 9.4e-38 161.8 288 42.7
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.6e-37 161.0 310 42.6
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 2.7e-37 160.2 309 42.1
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 2.7e-37 160.2 293 43.3
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 3.6e-37 159.8 331 40.5
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 6.1e-37 159.1 309 41.1
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.0e-36 158.3 361 39.6
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.0e-36 158.3 348 42.2
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.4e-36 157.9 314 39.2
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 1.1e-35 154.8 312 40.4
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 5.7e-35 152.5 320 38.4
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 7.4e-35 152.1 199 50.8
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 7.4e-35 152.1 292 41.4
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 9.7e-35 151.8 297 40.7
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.2e-34 150.6 306 41.2
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 2.8e-34 150.2 291 39.2
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 8.2e-34 148.7 292 39.7
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.4e-33 147.9 275 41.5
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 4.1e-33 146.4 307 40.4
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 5.3e-33 146.0 276 42.0
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 9.1e-33 145.2 334 39.2
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.9e-32 142.5 312 40.4
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 1.7e-31 141.0 290 42.4
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.2e-31 140.6 297 39.1
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 5.0e-31 139.4 394 33.5
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.1e-30 138.3 291 37.8
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 9.4e-30 135.2 331 37.5
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 1.6e-29 134.4 369 37.1
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.6e-29 134.4 351 34.8
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.4e-28 131.3 233 42.9
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 1.8e-28 131.0 333 39.3
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 2.6e-27 127.1 281 37.7
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.7e-27 125.9 397 34.5
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 4.1e-25 119.8 318 36.2
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 9.1e-25 118.6 241 41.5
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 1.5e-22 111.3 210 37.6
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 7.2e-22 109.0 202 39.6
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.2e-19 101.7 347 32.3
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 3.4e-19 100.1 207 35.7
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 6.1e-13 79.3 311 28.3
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 1.8e-12 77.8 270 33.0
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 1.3e-10 71.6 262 29.4
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 1.2e-08 65.1 273 25.6
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 4.5e-08 63.2 151 34.4


User provided reference genes

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