Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 1.5e-281 972.2 502 100.0
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 1.8e-170 603.2 503 63.4
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 4.8e-163 578.6 514 62.1
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 5.8e-161 571.6 496 62.3
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 4.6e-158 562.0 445 68.1
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 2.5e-156 556.2 504 60.3
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 4.1e-154 548.9 512 59.4
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 2.0e-153 546.6 501 58.3
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 2.2e-152 543.1 505 60.0
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 5.0e-152 542.0 517 58.0
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 2.1e-150 536.6 504 57.7
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 2.1e-150 536.6 502 58.2
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 6.1e-150 535.0 514 57.6
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 8.8e-149 531.2 520 57.3
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 4.3e-148 528.9 504 59.3
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 4.3e-148 528.9 517 57.6
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 9.7e-148 527.7 506 56.3
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 1.3e-147 527.3 503 58.1
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 2.8e-147 526.2 501 57.9
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 3.7e-147 525.8 484 58.5
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 4.8e-147 525.4 503 56.9
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 6.3e-147 525.0 508 57.9
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 4.1e-146 522.3 507 56.6
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 9.1e-146 521.2 506 55.9
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 9.1e-146 521.2 507 56.2
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 1.2e-145 520.8 486 58.0
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 1.2e-145 520.8 507 56.2
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 2.6e-145 519.6 507 56.0
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 2.5e-143 513.1 512 56.1
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 9.4e-143 511.1 421 66.3
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 1.6e-142 510.4 509 55.8
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 1.0e-141 507.7 486 58.8
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 3.9e-141 505.8 494 56.5
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 6.3e-139 498.4 511 55.0
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 8.2e-139 498.0 511 54.6
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 1.4e-138 497.3 512 53.1
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 2.4e-138 496.5 504 55.2
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 4.1e-138 495.7 515 54.6
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 2.0e-137 493.4 561 51.7
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 2.0e-137 493.4 458 59.0
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 1.3e-136 490.7 520 54.4
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 1.3e-136 490.7 497 54.9
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 1.7e-136 490.3 523 54.3
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 2.2e-136 490.0 497 53.7
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 3.8e-136 489.2 508 52.4
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 8.5e-136 488.0 523 54.9
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 3.2e-135 486.1 524 54.2
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 4.2e-135 485.7 532 52.1
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 4.2e-135 485.7 513 54.6
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 4.2e-135 485.7 525 53.0
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 1.0e-133 481.1 527 51.4
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 1.1e-132 477.6 489 53.0
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 5.7e-132 475.3 538 52.0
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 1.1e-130 471.1 530 50.4
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 1.8e-130 470.3 526 53.2
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 4.2e-127 459.1 504 51.6
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.6e-126 457.2 504 51.6
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 1.6e-126 457.2 433 59.4
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 2.3e-125 453.4 508 51.8
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 8.8e-125 451.4 504 52.8
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 1.2e-124 451.1 504 52.8
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 2.8e-123 446.4 518 51.9
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 4.1e-122 442.6 487 50.1
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 5.3e-122 442.2 512 52.7
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 5.3e-122 442.2 512 52.7
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 9.1e-122 441.4 542 48.7
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 8.5e-120 434.9 511 51.9
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 1.9e-119 433.7 550 45.6
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 3.2e-119 433.0 507 53.1
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 4.0e-117 426.0 498 48.4
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 6.6e-112 408.7 532 44.5
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 6.1e-110 402.1 510 46.3
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 6.8e-109 398.7 443 54.2
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 1.2e-108 397.9 356 62.4
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 5.7e-108 395.6 366 60.1
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 2.2e-107 393.7 405 56.5
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 8.6e-104 381.7 513 45.6
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 2.5e-103 380.2 398 55.3
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 1.6e-102 377.5 413 53.3
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 3.2e-98 363.2 378 54.8
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 5.4e-98 362.5 383 53.3
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 1.7e-96 357.5 393 52.9
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 2.0e-92 344.0 411 50.9
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 1.3e-91 341.3 399 50.4
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 1.7e-91 340.9 367 52.3
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 1.4e-90 337.8 403 48.9
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 5.1e-88 329.3 486 42.6
QL10p037675 Quercus lobata HOM05D007044 ORTHO05D008981 8.6e-80 302.0 315 57.8
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 9.6e-71 271.9 733 28.0
Eucgr.I00024 Eucalyptus grandis HOM05D007044 ORTHO05D008981 4.7e-70 269.6 301 52.2
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 8.1e-70 268.9 379 41.2
Cpa.g.sc138.45 Carica papaya HOM05D007044 ORTHO05D008981 3.4e-68 263.5 194 65.5
QL10p037666 Quercus lobata HOM05D007044 ORTHO05D008981 1.3e-64 251.5 194 65.5
PGSC0003DMG400004247 Solanum tuberosum HOM05D007044 ORTHO05D008981 1.7e-64 251.1 195 63.1
CDE06G2742 Ceratophyllum demersum HOM05D007044 ORTHO05D008981 5.3e-61 239.6 187 64.2
RcHm_v2.0_Chr3g0485001 Rosa chinensis HOM05D007044 ORTHO05D008981 9.9e-60 235.3 288 46.9
Glyma.10G176100 Glycine max HOM05D007044 ORTHO05D008981 2.2e-59 234.2 296 49.3
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 2.1e-54 217.6 286 47.9
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 3.7e-54 216.9 385 37.9
MELO3C033209.2 Cucumis melo HOM05D007044 ORTHO05D008981 5.9e-36 156.4 162 55.6
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 1.9e-34 151.4 383 31.3
FAN28G0850 Fragaria x ananassa HOM05D007044 ORTHO05D008981 3.1e-29 134.0 224 38.8
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 7.7e-28 129.4 393 29.0
Cre07.g346418 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 2.9e-27 127.5 211 35.5
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 2.9e-27 127.5 607 24.5
MCO15G559 Micromonas commoda HOM05D007044 ORTHO05D008981 4.2e-26 123.6 327 33.0
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea HOM05D001339 ORTHO05D008981 2.2e-22 111.3 120 50.0
CBR_g30110 Chara braunii HOM05D007044 ORTHO05D008981 3.8e-19 100.5 185 33.5
Cpa.g.sc138.46 Carica papaya HOM05D007044 ORTHO05D008981 8.0e-17 92.8 214 32.7
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 2.3e-16 91.3 55 74.5
PRCOL_00004023 Prasinoderma coloniale HOM05D007044 ORTHO05D044099 1.1e-13 82.4 285 27.7
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 1.4e-13 82.0 297 25.3
Cre03.g164650 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 1.8e-13 81.6 300 26.3
Mapoly0016s0035 Marchantia polymorpha HOM05D005656 ORTHO05D006437 2.4e-13 81.3 277 24.5
SMO351G0583 Selaginella moellendorffii HOM05D005656 ORTHO05D007094 4.5e-12 77.0 169 29.6
Actinidia16039 Actinidia chinensis HOM05D007044 ORTHO05D008981 1.7e-11 75.1 172 35.5
AagrBONN_evm.TU.Sc2ySwM_117.735 Anthoceros agrestis HOM05D004224 ORTHO05D006437 6.5e-11 73.2 171 28.7
MCO05G022 Micromonas commoda HOM05D007044 ORTHO05D028567 1.9e-10 71.6 341 25.8
SMO356G0148 Selaginella moellendorffii HOM05D005416 ORTHO05D007956 7.2e-10 69.7 429 23.1
AagrBONN_evm.TU.Sc2ySwM_228.1763 Anthoceros agrestis HOM05D004224 ORTHO05D006437 9.4e-10 69.3 288 22.2
MCO12G473 Micromonas commoda HOM05D005456 ORTHO05D006805 6.1e-09 66.6 194 26.8
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 8.0e-09 66.2 296 26.7
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 1.0e-08 65.9 300 25.3
SMO367G0558 Selaginella moellendorffii HOM05D005456 ORTHO05D006805 2.3e-08 64.7 173 26.0
AagrBONN_evm.TU.Sc2ySwM_228.2225 Anthoceros agrestis HOM05D001316 ORTHO05D001113 6.8e-08 63.2 205 23.4
Pp3c10_18400 Physcomitrium patens HOM05D005656 ORTHO05D007094 6.8e-08 63.2 323 22.6
Mapoly0036s0143 Marchantia polymorpha HOM05D006557 ORTHO05D048806 8.8e-08 62.8 351 22.2
Mapoly0067s0015 Marchantia polymorpha HOM05D004224 ORTHO05D006437 8.8e-08 62.8 496 22.0
Actinidia33219 Actinidia chinensis HOM05D005456 ORTHO05D006805 2.6e-07 61.2 166 25.9
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 2.6e-07 61.2 238 23.1
Rhsim12G0132700 Rhododendron simsii HOM05D005456 ORTHO05D006805 2.6e-07 61.2 170 26.5
Ah.03g134770 Amaranthus hybridus HOM05D005456 ORTHO05D006805 4.4e-07 60.5 168 26.2
EL10Ac6g13252 Beta vulgaris HOM05D005456 ORTHO05D006805 4.4e-07 60.5 169 27.2
AUR62032826 Chenopodium quinoa HOM05D005456 ORTHO05D006805 5.7e-07 60.1 169 26.6
MD16G1067900 Malus domestica HOM05D005456 ORTHO05D006805 5.7e-07 60.1 172 27.3
ATR0564G531 Amborella trichopoda HOM05D005456 ORTHO05D006805 1.3e-06 58.9 179 27.4
Cc11_g12670 Coffea canephora HOM05D005456 ORTHO05D006805 1.3e-06 58.9 167 26.9
PRCOL_00000792 Prasinoderma coloniale HOM05D004224 ORTHO05D028567 1.3e-06 58.9 325 23.1
HPP92_011000 Vanilla planifolia HOM05D005456 ORTHO05D006805 1.3e-06 58.9 157 28.0
Cfa023385 Carpinus fangiana HOM05D005456 ORTHO05D028567 1.7e-06 58.5 314 22.6
HanXRQChr10g0308211 Helianthus annuus HOM05D006247 ORTHO05D007684 2.2e-06 58.2 299 24.7
Pp3c3_17260 Physcomitrium patens HOM05D005456 ORTHO05D006805 2.2e-06 58.2 172 25.6
CDE07G0572 Ceratophyllum demersum HOM05D005456 ORTHO05D006805 2.8e-06 57.8 387 22.0
QL03p069503 Quercus lobata HOM05D005456 ORTHO05D006805 3.7e-06 57.4 168 25.6
AUR62005833 Chenopodium quinoa HOM05D005456 ORTHO05D006805 4.8e-06 57.0 169 26.0
Pp3c18_1260 Physcomitrium patens HOM05D004224 ORTHO05D016538 4.8e-06 57.0 318 22.0
Atru.chr11.1727 Acer truncatum HOM05D005456 ORTHO05D006805 6.3e-06 56.6 170 27.6
DCAR_030997 Daucus carota HOM05D005456 ORTHO05D006805 6.3e-06 56.6 172 24.4
FAN12G1233 Fragaria x ananassa HOM05D005456 ORTHO05D006805 8.3e-06 56.2 168 25.0
Mapoly0108s0064 Marchantia polymorpha HOM05D005416 ORTHO05D007956 8.3e-06 56.2 243 24.3


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