Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A478T87 Lonicera japonica HOM05D002529 ORTHO05D002664 1.2e-46 189.5 97 100.0
Actinidia33839 Actinidia chinensis HOM05D002529 ORTHO05D002664 8.4e-16 87.0 102 52.0
Dinv02599 Davidia involucrata HOM05D002529 ORTHO05D002664 8.4e-16 87.0 103 56.3
Dinv02597 Davidia involucrata HOM05D002529 ORTHO05D002664 2.5e-15 85.5 111 52.3
CSS0013639 Camellia sinensis var. sinensis HOM05D002529 ORTHO05D002664 2.1e-14 82.4 107 49.5
Dinv05119 Davidia involucrata HOM05D002529 ORTHO05D002664 3.5e-14 81.6 118 49.2
Duzib128G1976 Durio zibethinus HOM05D002529 ORTHO05D002664 2.5e-12 75.5 102 46.1
Rhsim05G0150200 Rhododendron simsii HOM05D002529 ORTHO05D002664 2.5e-12 75.5 100 48.0
Lsat_1_v5_gn_1_56180 Lactuca sativa HOM05D002529 ORTHO05D002664 1.3e-11 73.2 97 45.4
Oeu006310.1 Olea europaea HOM05D002529 ORTHO05D002664 1.1e-10 70.1 103 45.6
Potri.005G047901 Populus trichocarpa HOM05D002529 ORTHO05D002664 1.1e-10 70.1 105 43.8
Prupe.6G025700 Prunus persica HOM05D002529 ORTHO05D002664 3.1e-10 68.6 109 44.0
CiPaw.07G007900 Carya illinoinensis HOM05D002529 ORTHO05D002664 5.3e-10 67.8 106 41.5
ClCG11G014280 Citrullus lanatus HOM05D002529 ORTHO05D002664 6.9e-10 67.4 101 44.6
Potri.013G035000 Populus trichocarpa HOM05D002529 ORTHO05D002664 1.2e-09 66.6 105 42.9
PSO210G6081 Papaver somniferum HOM05D002529 ORTHO05D002664 1.5e-09 66.2 101 42.6
Gohir.A11G298500 Gossypium hirsutum HOM05D002529 ORTHO05D002664 2.6e-09 65.5 106 41.5
MSTRG.5850 Avicennia marina HOM05D002529 ORTHO05D002664 3.4e-09 65.1 108 45.4
HanXRQChr07g0200741 Helianthus annuus HOM05D002529 ORTHO05D002664 3.4e-09 65.1 98 42.9
PSO832G3905 Papaver somniferum HOM05D002529 ORTHO05D002664 3.4e-09 65.1 101 41.6
Prupe.6G337800 Prunus persica HOM05D002529 ORTHO05D002664 3.4e-09 65.1 108 42.6
Thecc.05G290400 Theobroma cacao HOM05D002529 ORTHO05D002664 3.4e-09 65.1 110 40.9
DCAR_018312 Daucus carota HOM05D002529 ORTHO05D002664 4.5e-09 64.7 103 42.7
Migut.L01786 Erythranthe guttata HOM05D002529 ORTHO05D002664 4.5e-09 64.7 106 39.6
Gohir.D11G313300 Gossypium hirsutum HOM05D002529 ORTHO05D002664 4.5e-09 64.7 106 40.6
Nitab4.5_0004903g0030 Nicotiana tabacum HOM05D002529 ORTHO05D002664 5.9e-09 64.3 104 42.3
Cc06_g23700 Coffea canephora HOM05D002529 ORTHO05D002664 7.6e-09 63.9 109 42.2
Gorai.007G344500 Gossypium raimondii HOM05D002529 ORTHO05D002664 7.6e-09 63.9 106 40.6
MD03G1029600 Malus domestica HOM05D002529 ORTHO05D002664 7.6e-09 63.9 109 40.4
RcHm_v2.0_Chr1g0334081 Rosa chinensis HOM05D002529 ORTHO05D002664 7.6e-09 63.9 100 42.0
Lj4g0005583 Lotus japonicus HOM05D002529 ORTHO05D002664 1.0e-08 63.5 109 44.0
Glyma.13G169100 Glycine max HOM05D002529 ORTHO05D002664 1.7e-08 62.8 107 39.3
Hma1.2p1_0083F.1_g042670 Hydrangea macrophylla HOM05D002529 ORTHO05D002664 2.2e-08 62.4 112 42.0
MD04G1217800 Malus domestica HOM05D002529 ORTHO05D002664 2.9e-08 62.0 103 40.8
QL08p059718 Quercus lobata HOM05D002529 ORTHO05D002664 5.0e-08 61.2 113 38.1
vmacro19828 Vaccinium macrocarpon HOM05D002529 ORTHO05D002664 5.0e-08 61.2 112 40.2
Sed0025735 Sechium edule HOM05D002529 ORTHO05D002664 6.5e-08 60.8 96 39.6
Ca_23953_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 8.5e-08 60.5 112 38.4
Ca_23959_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 8.5e-08 60.5 112 38.4
ECA238G0509 Erigeron canadensis HOM05D002529 ORTHO05D002664 8.5e-08 60.5 92 42.4
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 8.5e-08 60.5 101 38.6
CiPaw.08G178400 Carya illinoinensis HOM05D002529 ORTHO05D002664 1.1e-07 60.1 108 39.8
CAN.G134.40 Capsicum annuum HOM05D002529 ORTHO05D002664 2.5e-07 58.9 108 39.8
Nitab4.5_0002687g0060 Nicotiana tabacum HOM05D002529 ORTHO05D002664 2.5e-07 58.9 105 38.1
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 3.2e-07 58.5 93 46.2
Manes.08G120700 Manihot esculenta HOM05D002529 ORTHO05D002664 3.2e-07 58.5 100 39.0
Peaxi162Scf00220g00009 Petunia axillaris HOM05D002529 ORTHO05D002664 3.2e-07 58.5 112 38.4
HanXRQChr14g0457681 Helianthus annuus HOM05D002529 ORTHO05D002664 4.2e-07 58.2 96 39.6
Nitab4.5_0003586g0050 Nicotiana tabacum HOM05D002529 ORTHO05D002664 4.2e-07 58.2 105 38.1
Peaxi162Scf00220g00008 Petunia axillaris HOM05D002529 ORTHO05D002664 4.2e-07 58.2 102 40.2
Ciclev10002511m.g Citrus clementina HOM05D002529 ORTHO05D002664 5.5e-07 57.8 112 39.3
CsaV3_3G047670 Cucumis sativus L. HOM05D002529 ORTHO05D002664 5.5e-07 57.8 105 36.2
Glyma.19G009300 Glycine max HOM05D002529 ORTHO05D002664 7.2e-07 57.4 107 36.4
Oeu021565.1 Olea europaea HOM05D002529 ORTHO05D002664 9.3e-07 57.0 103 39.8
Lj1g0003097 Lotus japonicus HOM05D002529 ORTHO05D002664 1.2e-06 56.6 102 43.1
TAR374G0044 Trochodendron aralioides HOM05D002529 ORTHO05D002664 1.2e-06 56.6 100 41.0
GSVIVG01021882001 Vitis vinifera HOM05D002529 ORTHO05D002664 1.2e-06 56.6 115 40.0
Nn1g02343 Nelumbo nucifera HOM05D002529 ORTHO05D002664 1.6e-06 56.2 96 40.6
RcHm_v2.0_Chr2g0125761 Rosa chinensis HOM05D002529 ORTHO05D002664 2.1e-06 55.8 103 39.8
RcHm_v2.0_Chr5g0076411 Rosa chinensis HOM05D002529 ORTHO05D002664 2.1e-06 55.8 98 39.8
Sed0014372 Sechium edule HOM05D002529 ORTHO05D002664 2.1e-06 55.8 110 45.5
Eucgr.H04397 Eucalyptus grandis HOM05D002529 ORTHO05D002664 2.7e-06 55.5 102 34.3
unitig_578.g16363 Utricularia gibba HOM05D000550 ORTHO05D000400 2.7e-06 55.5 110 37.3
AUR62000960 Chenopodium quinoa HOM05D002529 ORTHO05D002664 3.6e-06 55.1 102 42.2
AUR62005008 Chenopodium quinoa HOM05D002529 ORTHO05D002664 3.6e-06 55.1 107 39.3
FAN13G2107 Fragaria x ananassa HOM05D002529 ORTHO05D002664 3.6e-06 55.1 100 39.0
PGSC0003DMG400027508 Solanum tuberosum HOM05D002529 ORTHO05D002664 3.6e-06 55.1 108 38.9
MSTRG.26637 Avicennia marina HOM05D002529 ORTHO05D002664 4.6e-06 54.7 104 42.3
Nn5g28120 Nelumbo nucifera HOM05D002529 ORTHO05D002664 4.6e-06 54.7 96 38.5
TAR376G0308 Trochodendron aralioides HOM05D002529 ORTHO05D002664 4.6e-06 54.7 99 37.4
TAR636G3415 Trochodendron aralioides HOM05D002529 ORTHO05D002664 4.6e-06 54.7 101 37.6
ClCG05G009860 Citrullus lanatus HOM05D002529 ORTHO05D002664 6.1e-06 54.3 96 41.7
Sabra05G0043300 Salix brachista HOM05D002529 ORTHO05D002664 6.1e-06 54.3 103 39.8
Solyc01g096760.3 Solanum lycopersicum HOM05D002529 ORTHO05D002664 6.1e-06 54.3 106 35.8
Sopen01g040470 Solanum pennellii HOM05D002529 ORTHO05D002664 6.1e-06 54.3 106 35.8
Aqoxy3G00616 Aquilegia oxysepala HOM05D002529 ORTHO05D002664 7.9e-06 53.9 102 38.2
Glyma.18G147100 Glycine max HOM05D002529 ORTHO05D002664 7.9e-06 53.9 112 39.3


User provided reference genes

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