Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A478G81 Lonicera japonica HOM05D004408 ORTHO05D005486 4.6e-86 321.2 167 100.0
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 3.9e-69 265.0 147 90.5
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 1.1e-66 256.9 144 88.2
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 1.8e-66 256.1 147 88.4
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 1.8e-66 256.1 147 88.4
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 3.1e-66 255.4 164 80.5
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 3.1e-66 255.4 144 88.9
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 4.0e-66 255.0 144 88.9
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 5.3e-66 254.6 164 78.7
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 6.9e-66 254.2 147 88.4
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 6.9e-66 254.2 160 80.6
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 9.0e-66 253.8 147 86.4
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 9.0e-66 253.8 143 90.2
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 2.6e-65 252.3 143 89.5
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 3.4e-65 251.9 144 89.6
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 4.5e-65 251.5 160 79.4
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 5.8e-65 251.1 147 87.8
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 7.6e-65 250.8 147 85.7
arahy.Tifrunner.gnm1.ann1.N9X86H Arachis hypogaea HOM05D004408 ORTHO05D005486 7.6e-65 250.8 147 85.7
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 9.9e-65 250.4 160 80.0
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 1.3e-64 250.0 144 89.6
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 1.7e-64 249.6 144 86.8
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 1.7e-64 249.6 160 78.8
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 2.2e-64 249.2 151 83.4
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 3.8e-64 248.4 144 86.8
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 4.9e-64 248.1 147 85.0
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 6.4e-64 247.7 144 86.1
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 6.4e-64 247.7 144 86.1
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 6.4e-64 247.7 164 76.2
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 1.4e-63 246.5 144 85.4
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 1.9e-63 246.1 147 83.7
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 3.2e-63 245.4 144 89.6
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 3.2e-63 245.4 147 83.7
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 3.2e-63 245.4 144 86.1
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 4.2e-63 245.0 144 84.7
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 5.4e-63 244.6 144 85.4
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 5.4e-63 244.6 147 83.7
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 5.4e-63 244.6 144 86.8
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 7.1e-63 244.2 144 84.0
Nitab4.5_0000921g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 7.1e-63 244.2 145 85.5
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 1.2e-62 243.4 151 82.8
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 1.6e-62 243.0 148 85.1
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.6e-62 243.0 144 84.7
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 2.1e-62 242.7 147 83.0
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 2.7e-62 242.3 144 85.4
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 2.7e-62 242.3 144 85.4
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 3.5e-62 241.9 144 85.4
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.5e-62 241.9 155 80.6
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 3.5e-62 241.9 147 85.7
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 4.6e-62 241.5 147 83.7
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 4.6e-62 241.5 144 85.4
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 6.0e-62 241.1 147 83.7
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 6.0e-62 241.1 147 84.4
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 7.9e-62 240.7 144 84.7
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 1.0e-61 240.4 146 80.1
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 1.0e-61 240.4 145 84.8
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 1.0e-61 240.4 147 83.7
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 1.8e-61 239.6 147 81.6
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 1.8e-61 239.6 147 82.3
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 3.9e-61 238.4 144 84.0
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 5.1e-61 238.0 147 83.0
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 5.1e-61 238.0 147 83.0
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 5.1e-61 238.0 146 82.9
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 8.7e-61 237.3 147 81.6
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 4.3e-60 235.0 147 82.3
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 5.6e-60 234.6 147 83.0
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 7.4e-60 234.2 146 82.2
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 1.6e-59 233.0 147 76.9
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 2.1e-59 232.6 144 82.6
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 3.7e-59 231.9 144 81.9
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 3.7e-59 231.9 147 78.9
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 8.1e-59 230.7 144 81.9
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.8e-58 229.6 144 81.2
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 3.1e-58 228.8 144 80.6
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 3.1e-58 228.8 160 74.4
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.0e-58 228.4 144 81.2
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 5.3e-58 228.0 147 78.2
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 1.5e-57 226.5 160 73.8
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 2.0e-57 226.1 147 78.9
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 7.6e-57 224.2 147 78.9
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 7.6e-57 224.2 148 78.4
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 2.9e-56 222.2 147 77.6
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 2.9e-56 222.2 148 77.0
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 2.9e-56 222.2 148 77.0
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 4.9e-56 221.5 145 80.7
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 8.4e-56 220.7 148 77.0
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 8.4e-56 220.7 148 77.0
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 8.4e-56 220.7 148 77.0
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 1.1e-55 220.3 148 78.4
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 1.4e-55 219.9 145 80.0
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 1.4e-55 219.9 145 80.0
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 4.2e-55 218.4 145 79.3
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 4.2e-55 218.4 145 79.3
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 1.3e-53 213.4 147 77.6
SEGI_37886 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 6.7e-53 211.1 155 69.0
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 7.9e-46 187.6 159 62.3
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 1.9e-44 183.0 168 58.3
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 5.3e-42 174.9 121 76.9
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 5.9e-41 171.4 144 66.0
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 2.9e-40 169.1 147 58.5
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 7.2e-39 164.5 144 64.6
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 2.3e-37 159.5 150 58.0
Cpa.g.sc117.53 Carica papaya HOM05D004408 ORTHO05D005486 1.9e-36 156.4 95 80.0
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 3.3e-36 155.6 160 53.8
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 5.7e-36 154.8 161 54.7
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 3.1e-34 149.1 94 81.9
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea HOM05D004408 ORTHO05D005486 1.1e-18 97.4 53 94.3
PRCOL_00003187 Prasinoderma coloniale HOM05D004408 ORTHO05D005486 1.1e-10 70.9 154 34.4


User provided reference genes

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