Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 2.0e-103 379.0 185 100.0
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.4e-27 126.3 81 72.8
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.4e-27 126.3 81 72.8
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 5.3e-27 125.2 76 72.4
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 5.3e-27 125.2 78 75.6
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 5.3e-27 125.2 67 82.1
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 2.6e-26 122.9 67 79.1
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.0e-25 120.9 79 70.9
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.3e-25 120.6 79 69.6
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.3e-25 120.6 73 72.6
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 1.7e-25 120.2 80 66.2
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 2.9e-25 119.4 80 65.0
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 5.0e-25 118.6 67 79.1
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 6.5e-25 118.2 67 77.6
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 6.5e-25 118.2 67 77.6
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 1.5e-24 117.1 66 77.3
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 1.5e-24 117.1 66 77.3
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.5e-24 117.1 67 77.6
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 1.5e-24 117.1 67 77.6
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 1.5e-24 117.1 67 76.1
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 1.5e-24 117.1 81 65.4
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 1.5e-24 117.1 81 65.4
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 1.5e-24 117.1 76 72.4
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 1.9e-24 116.7 92 59.8
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 1.9e-24 116.7 78 66.7
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 1.9e-24 116.7 81 65.4
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 2.5e-24 116.3 81 67.9
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 2.5e-24 116.3 67 77.6
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 2.5e-24 116.3 67 76.1
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 65.4
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 64.2
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 64.2
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 66.7
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 66.7
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 3.2e-24 115.9 67 76.1
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 65.4
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 3.2e-24 115.9 81 65.4
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 3.2e-24 115.9 67 76.1
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 5.5e-24 115.2 76 68.4
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 7.2e-24 114.8 69 73.9
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 7.2e-24 114.8 67 74.6
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 7.2e-24 114.8 67 76.1
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 7.2e-24 114.8 67 73.1
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 7.2e-24 114.8 76 69.7
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 9.4e-24 114.4 81 65.4
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 9.4e-24 114.4 67 73.1
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 9.4e-24 114.4 71 71.8
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 1.2e-23 114.0 67 76.1
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 1.2e-23 114.0 67 76.1
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.2e-23 114.0 67 71.6
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 1.6e-23 113.6 81 64.2
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 1.6e-23 113.6 69 72.5
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 1.6e-23 113.6 81 61.7
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 2.1e-23 113.2 81 61.7
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.1e-23 113.2 67 76.1
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.1e-23 113.2 67 76.1
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 2.1e-23 113.2 81 63.0
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 2.7e-23 112.8 67 74.6
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 2.7e-23 112.8 67 76.1
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.7e-23 112.8 67 76.1
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 2.7e-23 112.8 67 74.6
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 3.6e-23 112.5 90 58.9
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 4.7e-23 112.1 79 68.4
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 6.1e-23 111.7 67 73.1
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 6.1e-23 111.7 81 61.7
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 6.1e-23 111.7 67 74.6
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 8.0e-23 111.3 81 61.7
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 8.0e-23 111.3 67 74.6
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 8.0e-23 111.3 77 66.2
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 1.0e-22 110.9 81 60.5
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 1.4e-22 110.5 67 71.6
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.4e-22 110.5 65 73.8
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.8e-22 110.2 67 73.1
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 1.8e-22 110.2 67 73.1
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 1.8e-22 110.2 67 68.7
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 2.3e-22 109.8 67 71.6
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 2.3e-22 109.8 80 63.8
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 3.0e-22 109.4 92 55.4
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 3.0e-22 109.4 77 66.2
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 3.0e-22 109.4 67 73.1
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 4.0e-22 109.0 79 62.0
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 6.7e-22 108.2 67 71.6
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 8.8e-22 107.8 81 59.3
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 8.8e-22 107.8 81 59.3
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 8.8e-22 107.8 81 59.3
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 8.8e-22 107.8 81 59.3
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 1.2e-21 107.5 65 72.3
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 1.2e-21 107.5 78 62.8
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.5e-21 107.1 66 71.2
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 1.5e-21 107.1 81 58.0
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 1.5e-21 107.1 81 61.7
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 1.5e-21 107.1 67 64.2
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 2.0e-21 106.7 81 59.3
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 2.6e-21 106.3 81 58.0
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 2.6e-21 106.3 67 70.1
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 3.3e-21 105.9 92 55.4
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 3.3e-21 105.9 67 68.7
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 4.4e-21 105.5 80 58.8
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 4.4e-21 105.5 67 65.7
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 5.7e-21 105.1 81 59.3
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 5.7e-21 105.1 81 56.8
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 7.5e-21 104.8 80 57.5
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 7.5e-21 104.8 81 54.3
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 7.5e-21 104.8 67 67.2
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 9.7e-21 104.4 76 60.5
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 9.7e-21 104.4 81 60.5
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 1.3e-20 104.0 93 58.1
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 1.7e-20 103.6 81 55.6
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 1.7e-20 103.6 67 67.2
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 2.2e-20 103.2 67 67.2
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 2.8e-20 102.8 81 54.3
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 2.8e-20 102.8 81 54.3
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 4.8e-20 102.1 79 58.2
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 4.8e-20 102.1 71 57.7
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 4.8e-20 102.1 67 65.7
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.1e-19 100.9 81 56.8
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 1.4e-19 100.5 76 63.2
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 2.4e-19 99.8 81 54.3
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 2.4e-19 99.8 81 54.3
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 2.4e-19 99.8 81 54.3
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 9.1e-19 97.8 80 53.8
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 2.0e-18 96.7 67 62.7
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 5.9e-18 95.1 67 64.2
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 2.9e-17 92.8 77 51.9
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 8.5e-17 91.3 67 56.7
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 3.4e-13 79.3 68 48.5
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 4.4e-13 79.0 70 44.3
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 1.3e-12 77.4 71 47.9
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 8.3e-12 74.7 62 56.5
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 4.1e-11 72.4 62 54.8
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 1.2e-10 70.9 66 45.5
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 4.2e-08 62.4 72 43.1
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 1.2e-07 60.8 62 48.4
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.8e-06 57.0 28 82.1
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.8e-06 57.0 28 82.1
MELO3C033061.2 Cucumis melo HOM05D005031 ORTHO05D006098 6.8e-06 55.1 28 82.1
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 8.8e-06 54.7 28 78.6


User provided reference genes

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