Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 6.7e-84 313.9 153 100.0
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 3.1e-57 225.3 146 76.7
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.1e-57 224.9 149 76.5
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 4.1e-57 224.9 149 76.5
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 9.1e-57 223.8 149 75.8
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 4.5e-56 221.5 148 75.0
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.7e-55 219.5 144 73.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 5.0e-55 218.0 148 75.7
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 5.0e-55 218.0 144 76.4
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 5.0e-55 218.0 144 76.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-54 216.9 146 74.0
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 2.5e-54 215.7 148 72.3
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.5e-54 215.7 146 74.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.2e-54 214.9 146 74.0
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 9.4e-54 213.8 147 72.8
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-53 212.6 146 74.0
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.7e-53 211.5 143 74.8
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.7e-53 211.5 145 73.8
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 4.7e-53 211.5 147 76.9
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 4.7e-53 211.5 147 76.9
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 4.7e-53 211.5 152 68.4
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 6.1e-53 211.1 144 74.3
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 8.0e-53 210.7 146 71.9
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.0e-52 210.3 145 71.7
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.4e-52 209.9 147 71.4
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.8e-52 209.5 146 71.9
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.8e-52 209.5 145 73.1
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.8e-52 209.5 144 74.3
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 2.3e-52 209.1 153 70.6
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.3e-52 209.1 146 71.2
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 3.0e-52 208.8 148 70.9
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 3.0e-52 208.8 146 70.5
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 3.0e-52 208.8 144 75.0
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.2e-52 208.0 145 73.1
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 5.2e-52 208.0 145 71.7
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 8.8e-52 207.2 146 69.9
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.2e-51 206.8 146 72.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.5e-51 206.5 145 72.4
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.5e-51 206.5 145 72.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.5e-51 206.5 145 72.4
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.5e-51 206.5 150 69.3
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 2.0e-51 206.1 146 71.2
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 2.6e-51 205.7 146 67.8
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 3.4e-51 205.3 149 69.8
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 3.4e-51 205.3 150 69.3
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 4.4e-51 204.9 146 69.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 4.4e-51 204.9 146 68.5
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 5.7e-51 204.5 144 73.6
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.7e-51 204.5 143 73.4
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 5.7e-51 204.5 150 69.3
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 7.5e-51 204.1 152 67.8
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 9.8e-51 203.8 145 67.6
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 9.8e-51 203.8 146 70.5
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 9.8e-51 203.8 152 70.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.3e-50 203.4 142 71.8
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.2e-50 202.6 149 69.1
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.8e-50 202.2 148 69.6
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.8e-50 202.2 142 73.2
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 2.8e-50 202.2 142 72.5
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.7e-50 201.8 150 67.3
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 4.8e-50 201.4 147 70.1
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 6.3e-50 201.1 142 69.0
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 6.3e-50 201.1 170 61.8
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 6.3e-50 201.1 148 68.9
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 8.3e-50 200.7 152 65.8
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.1e-49 200.3 160 65.6
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.1e-49 200.3 148 67.6
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.4e-49 199.9 147 69.4
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.8e-49 199.5 148 69.6
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.8e-49 199.5 145 68.3
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 4.1e-49 198.4 145 69.7
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 5.4e-49 198.0 146 67.1
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 5.4e-49 198.0 146 67.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 7.0e-49 197.6 143 67.8
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.2e-48 196.8 148 67.6
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.0e-48 196.1 143 68.5
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.7e-48 195.7 144 66.0
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 7.7e-48 194.1 146 63.7
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 8.5e-47 190.7 152 65.8
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 1.5e-46 189.9 146 63.7
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 7.2e-46 187.6 152 63.8
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.6e-45 186.4 155 61.9
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.1e-45 186.0 146 62.3
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.1e-45 186.0 135 71.9
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.7e-45 184.9 132 70.5
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 4.7e-45 184.9 155 61.9
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 4.0e-44 181.8 147 63.9
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.6e-43 179.1 161 57.8
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 4.4e-43 178.3 146 59.6
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 2.2e-42 176.0 129 70.5
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 3.7e-42 175.3 130 68.5
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 3.7e-42 175.3 145 59.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 8.3e-42 174.1 129 66.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.1e-41 173.7 129 66.7
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.1e-41 173.7 129 66.7
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.4e-41 173.3 129 66.7
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.4e-41 173.3 162 54.3
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-41 172.9 126 71.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 9.2e-41 170.6 135 63.7
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 5.9e-40 167.9 131 65.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.9e-40 167.9 145 62.8
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.5e-35 153.3 142 52.8
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-25 119.4 65 89.2
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 3.2e-25 119.0 141 44.7
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 4.6e-24 115.2 173 38.7
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-23 113.6 65 84.6
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 3.9e-23 112.1 157 42.0
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.4e-19 99.0 65 76.9
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 6.2e-13 78.2 79 49.4
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 8.1e-13 77.8 62 59.7
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 1.4e-12 77.0 52 65.4
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 4.0e-12 75.5 56 64.3
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 6.8e-12 74.7 49 69.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 6.8e-12 74.7 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 6.8e-12 74.7 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 6.8e-12 74.7 53 66.0
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.5e-11 73.6 57 59.6
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 1.7e-07 60.1 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 1.7e-07 60.1 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 1.7e-07 60.1 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 1.7e-07 60.1 49 59.2
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 5.6e-06 55.1 57 49.1


User provided reference genes

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