Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 3.3e-33 144.4 71 100.0
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 1.7e-26 122.1 61 91.8
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 6.6e-26 120.2 70 78.6
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 6.6e-26 120.2 61 88.5
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 8.6e-26 119.8 61 90.2
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 8.6e-26 119.8 61 90.2
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 8.6e-26 119.8 61 90.2
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.5e-25 119.0 61 90.2
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.5e-25 119.0 61 88.5
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.9e-25 118.6 61 90.2
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.9e-25 118.6 61 88.5
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.5e-25 118.2 61 88.5
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 3.3e-25 117.9 61 86.9
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 3.3e-25 117.9 61 85.2
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 3.3e-25 117.9 61 86.9
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 3.3e-25 117.9 61 86.9
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 4.3e-25 117.5 61 88.5
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 5.6e-25 117.1 61 86.9
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 5.6e-25 117.1 61 85.2
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.6e-25 117.1 61 86.9
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 5.6e-25 117.1 61 85.2
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 7.3e-25 116.7 61 86.9
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 7.3e-25 116.7 61 86.9
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 7.3e-25 116.7 61 83.6
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 7.3e-25 116.7 61 83.6
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 7.3e-25 116.7 61 85.2
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 9.5e-25 116.3 61 86.9
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 9.5e-25 116.3 61 86.9
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.6e-24 115.5 61 86.9
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.1e-24 115.2 61 85.2
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 2.8e-24 114.8 61 85.2
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.8e-24 114.8 61 85.2
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 2.8e-24 114.8 61 85.2
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 3.6e-24 114.4 61 86.9
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 4.7e-24 114.0 61 83.6
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.2e-24 113.6 61 83.6
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 6.2e-24 113.6 61 83.6
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 8.0e-24 113.2 61 83.6
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 8.0e-24 113.2 61 82.0
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.1e-23 112.8 66 77.3
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.1e-23 112.8 61 83.6
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.1e-23 112.8 61 83.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.4e-23 112.5 61 82.0
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.8e-23 112.1 61 78.7
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.3e-23 111.7 61 82.0
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.1e-23 111.3 61 82.0
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 3.1e-23 111.3 61 80.3
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 4.0e-23 110.9 61 80.3
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 5.2e-23 110.5 61 83.6
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 6.8e-23 110.2 61 82.0
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 8.9e-23 109.8 61 80.3
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-22 109.4 61 77.0
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.2e-22 109.4 61 78.7
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.5e-22 109.0 61 80.3
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.5e-22 109.0 61 80.3
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.5e-22 109.0 61 80.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.5e-22 109.0 61 80.3
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.5e-22 109.0 61 78.7
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.5e-22 109.0 61 82.0
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.0e-22 108.6 61 78.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 2.6e-22 108.2 61 80.3
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.6e-22 108.2 64 75.0
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 2.6e-22 108.2 61 78.7
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.4e-22 107.8 61 75.4
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.4e-22 107.5 66 74.2
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 4.4e-22 107.5 61 75.4
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 5.8e-22 107.1 61 77.0
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 5.8e-22 107.1 61 77.0
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 5.8e-22 107.1 61 77.0
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 5.8e-22 107.1 61 77.0
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.8e-22 107.1 61 78.7
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 7.5e-22 106.7 61 75.4
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 7.5e-22 106.7 61 78.7
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 9.8e-22 106.3 61 78.7
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.8e-22 106.3 61 78.7
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.8e-22 106.3 61 78.7
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 9.8e-22 106.3 61 77.0
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.3e-21 105.9 61 75.4
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.3e-21 105.9 61 75.4
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.3e-21 105.9 61 75.4
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.7e-21 105.5 61 77.0
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.7e-21 105.5 61 75.4
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.7e-21 105.5 61 75.4
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.7e-21 105.5 68 70.6
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.7e-21 105.5 61 75.4
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.2e-21 105.1 61 77.0
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.2e-21 105.1 61 75.4
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 2.2e-21 105.1 61 78.7
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 2.2e-21 105.1 61 78.7
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 2.9e-21 104.8 61 75.4
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 2.9e-21 104.8 61 75.4
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 2.9e-21 104.8 61 75.4
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.9e-21 104.0 61 75.4
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 4.9e-21 104.0 55 89.1
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 6.4e-21 103.6 68 70.6
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.4e-21 103.6 61 72.1
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 8.3e-21 103.2 61 77.0
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 8.3e-21 103.2 61 78.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.1e-20 102.8 61 77.0
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 3.2e-20 101.3 68 69.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.2e-20 101.3 61 75.4
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 4.1e-20 100.9 61 73.8
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 5.4e-20 100.5 61 72.1
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 9.2e-20 99.8 55 81.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.2e-19 99.4 61 73.8
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 7.8e-19 96.7 61 68.9
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 1.1e-17 92.8 61 63.9
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.2e-16 89.4 61 63.9
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 4.7e-16 87.4 61 60.7
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 1.4e-15 85.9 57 68.4
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 3.1e-15 84.7 61 62.3
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 5.2e-15 84.0 57 68.4
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 5.2e-15 84.0 42 92.9
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 4.4e-14 80.9 42 85.7
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.2e-13 78.6 61 54.1
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 8.3e-13 76.6 49 71.4
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.1e-12 76.3 51 62.7
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.4e-12 75.9 42 73.8
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 3.2e-12 74.7 59 52.5
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 2.7e-11 71.6 45 68.9
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 6.0e-11 70.5 73 47.9
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 7.8e-11 70.1 59 50.8
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 3.3e-09 64.7 61 44.3


User provided reference genes

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