Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 1.3e-79 299.7 147 100.0
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 1.2e-13 80.5 147 37.4
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.3e-12 77.0 139 37.4
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.8e-12 75.5 147 36.7
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.8e-12 75.5 147 36.7
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.1e-11 73.9 146 34.9
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 2.5e-11 72.8 147 36.7
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 3.3e-11 72.4 134 36.6
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 4.3e-11 72.0 140 34.3
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 5.6e-11 71.6 139 35.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 7.3e-11 71.2 146 34.2
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.6e-10 70.1 133 36.1
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.6e-10 70.1 147 34.0
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.6e-10 70.1 140 34.3
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.6e-10 70.1 140 34.3
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 2.8e-10 69.3 148 34.5
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 2.8e-10 69.3 143 34.3
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 3.6e-10 68.9 145 34.5
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 4.7e-10 68.6 140 33.6
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 8.0e-10 67.8 139 33.8
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 8.0e-10 67.8 140 33.6
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 8.0e-10 67.8 134 34.3
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 8.0e-10 67.8 134 34.3
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 1.0e-09 67.4 140 35.0
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.0e-09 67.4 137 33.6
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.4e-09 67.0 133 37.6
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.4e-09 67.0 147 32.7
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.4e-09 67.0 143 32.9
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.4e-09 67.0 134 34.3
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.8e-09 66.6 139 32.4
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 2.3e-09 66.2 139 32.4
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 3.1e-09 65.9 134 32.8
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 3.1e-09 65.9 137 34.3
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 3.1e-09 65.9 136 33.1
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 3.1e-09 65.9 144 32.6
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 4.0e-09 65.5 146 31.5
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 4.0e-09 65.5 147 32.7
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.0e-09 65.5 147 32.7
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 5.2e-09 65.1 146 32.9
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 6.8e-09 64.7 144 33.3
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 8.9e-09 64.3 136 33.8
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.9e-09 64.3 138 32.6
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 8.9e-09 64.3 145 31.0
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 1.2e-08 63.9 139 32.4
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.5e-08 63.5 139 32.4
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 1.5e-08 63.5 133 33.1
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.0e-08 63.2 134 34.3
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.0e-08 63.2 147 32.0
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 3.4e-08 62.4 134 33.6
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 3.4e-08 62.4 134 33.6
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 5.8e-08 61.6 134 32.8
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 5.8e-08 61.6 134 33.6
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 7.5e-08 61.2 136 33.1
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 9.8e-08 60.8 139 31.7
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 9.8e-08 60.8 133 33.1
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.3e-07 60.5 140 30.7
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.7e-07 60.1 146 31.5
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.7e-07 60.1 146 31.5
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.7e-07 60.1 146 31.5
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.2e-07 59.7 76 44.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 2.2e-07 59.7 146 31.5
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 2.9e-07 59.3 138 31.9
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 3.7e-07 58.9 132 30.3
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 3.7e-07 58.9 132 31.8
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 4.9e-07 58.5 134 31.3
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.4e-07 58.2 156 32.1
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 6.4e-07 58.2 134 31.3
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 6.4e-07 58.2 133 31.6
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 6.4e-07 58.2 132 30.3
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 6.4e-07 58.2 134 31.3
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 6.4e-07 58.2 134 29.9
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 6.4e-07 58.2 134 32.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 1.1e-06 57.4 139 31.7
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.1e-06 57.4 134 32.1
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.4e-06 57.0 134 30.6
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.9e-06 56.6 134 30.6
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.4e-06 56.2 134 29.1
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 3.2e-06 55.8 134 30.6
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 3.2e-06 55.8 134 30.6
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.2e-06 55.8 48 56.2
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 4.1e-06 55.5 134 30.6
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 4.1e-06 55.5 134 30.6
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 4.1e-06 55.5 134 30.6
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 4.1e-06 55.5 134 30.6
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 4.1e-06 55.5 35 68.6
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.4e-06 55.1 156 31.4
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 5.4e-06 55.1 134 30.6
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 7.0e-06 54.7 36 69.4
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 9.2e-06 54.3 35 71.4
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 9.2e-06 54.3 134 29.9
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 9.2e-06 54.3 35 71.4
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 9.2e-06 54.3 134 29.9


User provided reference genes

Program Settings