Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 2239.9 1139 100.0
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1723.0 1183 76.6
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1708.0 1187 75.7
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1705.6 1187 76.7
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1704.5 1185 76.0
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1701.0 1185 75.8
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1700.6 1185 75.8
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1698.7 1186 75.5
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1691.4 1186 75.4
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1691.0 1185 76.5
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1688.3 1185 75.4
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1686.4 1186 75.0
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1685.2 1185 74.9
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1682.2 1187 74.6
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1678.7 1198 74.5
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1676.8 1185 74.3
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1673.7 1185 74.7
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1672.1 1185 75.2
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1667.5 1183 74.3
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1665.6 1187 74.9
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 1662.9 1224 73.5
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1659.8 1194 74.2
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1656.0 1185 73.8
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1653.3 1184 74.4
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 1652.9 1224 73.1
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1652.5 1184 74.3
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1652.5 1181 73.8
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1651.3 1184 74.4
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1650.6 1185 74.3
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1647.5 1231 72.1
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1645.6 1227 72.1
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1643.6 1231 72.0
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1643.2 1231 71.9
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1642.5 1186 73.8
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1639.4 1182 73.7
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1638.2 1174 74.4
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1637.9 1174 74.4
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1637.9 1185 73.0
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1637.5 1182 72.7
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1632.1 1174 74.3
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1632.1 1187 73.1
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1631.3 1171 73.9
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1631.3 1237 71.0
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1627.8 1165 73.9
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1622.4 1186 72.8
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1621.7 1182 72.4
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1620.5 1182 72.4
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1617.1 1166 73.9
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1616.3 1212 71.5
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1614.4 1186 72.1
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1614.0 1188 72.1
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1609.7 1187 72.5
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1609.0 1244 69.6
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1606.7 1185 71.9
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1605.9 1209 71.8
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1605.5 1185 72.0
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1605.1 1185 72.2
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1604.3 1209 72.0
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1595.9 1174 72.3
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1594.3 1223 70.8
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1593.9 1223 70.8
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1592.8 1164 72.6
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1592.4 1191 71.5
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1591.2 1183 71.7
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1584.7 1245 68.8
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1582.4 1240 69.0
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1582.0 1189 71.9
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1580.8 1190 71.4
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1579.7 1179 71.7
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1579.7 1187 70.3
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1578.9 1189 71.7
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1578.1 1185 71.8
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1577.8 1184 70.6
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1577.4 1198 70.8
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1576.2 1181 72.0
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1574.7 1187 70.2
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 1574.3 1181 72.5
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1571.2 1180 70.7
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1567.7 1187 70.6
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1567.0 1187 71.3
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1566.2 1185 71.1
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1562.0 1187 69.5
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1561.6 1191 70.0
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1559.7 1222 69.4
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1557.3 1181 70.3
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1555.8 1185 69.8
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1555.0 1185 69.8
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1554.7 1184 69.3
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1554.3 1175 71.0
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1552.3 1183 70.2
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1552.0 1219 69.5
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1551.2 1184 70.4
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1545.8 1185 69.7
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1543.5 1248 67.9
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 1542.7 1182 69.6
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 1541.2 1183 69.3
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1539.2 1181 70.1
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1538.9 1184 68.9
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 1536.9 1183 69.1
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 1536.5 1185 69.3
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 1535.0 1183 69.0
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 1531.9 1185 69.5
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 1531.5 1185 69.1
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1521.1 1194 68.3
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1515.7 1080 74.9
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1505.7 1183 68.8
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1502.3 1182 68.5
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1498.0 1109 72.0
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1497.6 1210 67.6
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1487.6 1189 68.3
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1478.8 1162 68.1
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1462.2 1181 66.8
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1459.9 1188 66.2
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 1449.9 1160 67.7
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1448.3 1187 66.0
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1446.4 1182 65.8
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1439.5 1183 65.6
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1424.5 951 79.2
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1423.7 1121 69.1
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1360.1 1185 63.4
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1347.8 947 74.8
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1281.2 1192 61.1
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1268.1 956 72.4
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1247.3 946 70.2
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1243.4 1047 66.4
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1234.2 967 69.6
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1223.0 1154 58.8
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1159.8 978 67.9
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1159.4 970 67.9
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1128.6 897 67.6
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1125.5 788 75.1
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 2.1e-299 1032.7 823 68.3
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 4.1e-295 1018.5 823 68.8
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 2.0e-286 989.6 1166 52.5
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 1.5e-281 973.4 818 66.0
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 2.2e-280 969.5 541 89.6
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 2.9e-272 942.6 1155 48.1
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 4.7e-267 925.2 732 69.7
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 9.5e-260 901.0 1209 43.8
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 3.2e-223 779.6 725 62.1
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 6.1e-214 748.8 603 69.5
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.3e-192 677.9 432 78.5
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 3.0e-165 587.0 361 80.9
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 3.6e-150 537.0 308 84.7
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 3.0e-144 517.3 868 42.3
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 1.2e-132 478.8 307 76.2
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 1.5e-132 478.4 307 75.9
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 3.4e-116 424.1 282 76.2
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 2.2e-107 394.8 294 72.4
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 3.9e-96 357.5 228 76.3
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 5.7e-95 353.6 800 31.9
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 1.1e-93 349.4 198 84.3
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 5.5e-90 337.0 1336 27.2
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 1.5e-79 302.4 182 81.9
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 1.4e-72 279.3 218 66.5
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 6.3e-70 270.4 478 41.8
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 2.0e-68 265.4 274 57.7
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 6.5e-67 260.4 181 75.1
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 8.8e-64 250.0 144 86.1
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 9.1e-61 240.0 196 63.8
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 1.2e-57 229.6 249 55.8
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 4.1e-53 214.5 130 84.6
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 3.1e-48 198.4 199 57.8
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 3.4e-47 194.9 118 83.9
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 5.8e-47 194.1 125 77.6
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 1.9e-45 189.1 156 66.0
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 1.6e-36 159.5 92 88.0
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-24 119.8 86 69.8
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 1.8e-24 119.4 91 64.8
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 1.8e-24 119.4 91 64.8
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 4.6e-20 104.8 79 68.4
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 1.5e-18 99.8 65 69.2
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 2.8e-17 95.5 47 85.1
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 2.4e-16 92.4 58 75.9
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 9.9e-15 87.0 73 49.3


User provided reference genes

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