Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 0.0e+00 1327.4 654 100.0
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.9e-180 636.7 684 54.1
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.3e-163 580.9 669 49.8
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 2.5e-156 556.6 705 46.7
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.0e-154 549.3 693 47.3
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.0e-154 549.3 708 47.0
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.0e-152 544.7 694 47.3
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 1.5e-148 530.8 613 50.4
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.6e-147 527.3 687 45.9
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 2.9e-144 516.5 684 46.1
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 2.9e-144 516.5 684 46.1
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 2.1e-142 510.4 553 50.8
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 7.9e-142 508.4 684 45.3
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.3e-141 506.9 678 46.3
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.3e-141 506.9 662 45.8
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 3.0e-141 506.5 681 45.2
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.9e-140 503.8 663 46.5
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 4.3e-140 502.7 697 45.8
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 3.7e-139 499.6 654 47.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 4.8e-139 499.2 670 44.0
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 1.8e-138 497.3 691 43.8
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 4.1e-138 496.1 684 44.6
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 2.6e-137 493.4 674 42.4
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 1.7e-136 490.7 674 45.1
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 5.0e-136 489.2 658 45.9
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 5.0e-136 489.2 668 44.6
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 8.5e-136 488.4 674 45.3
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 4.2e-135 486.1 691 44.9
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 6.1e-134 482.3 658 43.0
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 7.9e-134 481.9 710 43.2
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.0e-133 481.5 675 45.3
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 3.9e-133 479.6 706 42.8
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 5.1e-133 479.2 680 44.1
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 6.7e-133 478.8 684 44.9
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 6.7e-133 478.8 659 45.2
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.5e-132 477.6 658 43.3
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.6e-132 476.9 665 44.7
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 5.7e-132 475.7 697 43.2
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 8.2e-131 471.9 649 46.2
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.1e-130 471.5 520 50.4
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 2.4e-130 470.3 676 45.4
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.3e-128 464.5 685 43.9
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 2.9e-128 463.4 677 44.6
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 2.9e-128 463.4 680 45.3
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 1.9e-127 460.7 747 41.1
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.9e-127 460.7 710 43.2
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 2.1e-126 457.2 681 43.8
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 3.0e-125 453.4 562 47.0
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 3.9e-125 453.0 688 42.6
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 6.3e-123 445.7 671 41.7
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 5.3e-122 442.6 522 46.2
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 7.2e-119 432.2 484 48.8
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 6.1e-118 429.1 662 41.8
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.7e-117 425.6 577 46.3
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 3.3e-116 423.3 684 41.5
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 5.3e-114 416.0 671 40.5
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 7.2e-111 405.6 645 40.5
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.8e-106 391.0 516 48.6
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 7.0e-106 389.0 493 45.0
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.2e-105 388.3 650 39.1
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.3e-104 384.8 366 59.0
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 1.0e-101 375.2 661 40.7
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.8e-101 374.4 671 38.3
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 2.3e-101 374.0 676 38.6
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 6.8e-101 372.5 685 38.2
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 6.8e-101 372.5 641 39.5
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 8.9e-101 372.1 406 50.5
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 7.5e-100 369.0 648 38.6
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 6.3e-99 365.9 646 37.6
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 2.4e-98 364.0 647 37.7
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.0e-93 348.6 691 36.9
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 3.4e-92 343.6 534 44.2
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 4.1e-90 336.7 401 46.1
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 9.2e-90 335.5 674 36.9
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.7e-89 334.0 467 44.1
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 8.6e-88 328.9 691 36.5
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 9.5e-87 325.5 555 38.9
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 4.7e-86 323.2 555 38.9
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.2e-86 322.8 557 38.1
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 8.9e-85 318.9 553 38.2
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 7.8e-81 305.8 744 33.9
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.6e-78 297.0 273 53.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 6.2e-78 296.2 682 33.0
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 4.4e-76 290.0 684 34.5
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.9e-75 287.3 376 42.0
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 1.2e-70 271.9 433 42.3
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 2.4e-69 267.7 340 49.4
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 6.4e-67 259.6 351 42.2
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 1.8e-61 241.5 304 43.4
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.5e-60 238.4 374 44.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 9.3e-58 229.2 326 46.0
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.3e-54 218.8 316 39.9
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 4.0e-53 213.8 214 55.6
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 9.0e-53 212.6 258 43.0
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 2.0e-52 211.5 359 36.5
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 5.8e-52 209.9 378 35.4
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.9e-50 204.9 255 45.9
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 4.2e-50 203.8 376 41.0
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 3.9e-48 197.2 250 44.4
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 6.7e-48 196.4 310 38.7
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.1e-46 191.4 347 40.3
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.3e-43 182.2 351 37.3
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.7e-43 181.8 250 45.2
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.5e-39 167.9 147 64.6
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.9e-35 154.5 498 25.9
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 3.9e-32 144.1 218 45.9
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 3.7e-30 137.5 284 32.4
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 7.7e-28 129.8 135 46.7
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.9e-25 119.8 236 39.8
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.1e-21 107.8 145 48.3
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 9.1e-21 106.3 194 43.3
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 1.4e-10 72.4 64 53.1
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 2.3e-08 65.1 89 48.3
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.7e-06 57.8 37 67.6
TAR381G0879 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.8e-06 57.4 169 27.2


User provided reference genes

Program Settings