Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 4.1e-136 488.0 245 100.0
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 3.5e-50 202.6 200 56.0
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 2.3e-49 199.9 200 57.0
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 2.9e-49 199.5 200 56.0
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 5.0e-49 198.7 200 55.5
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 8.6e-49 198.0 202 54.0
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.1e-48 197.6 200 56.5
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.1e-48 197.6 200 55.0
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.5e-48 197.2 200 55.5
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.5e-48 196.4 200 56.0
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 2.5e-48 196.4 200 55.0
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.5e-48 196.4 200 54.5
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 3.3e-48 196.1 200 55.0
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 3.3e-48 196.1 200 54.5
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 4.3e-48 195.7 200 55.5
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 5.6e-48 195.3 200 55.0
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 7.3e-48 194.9 200 55.0
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 9.5e-48 194.5 200 56.0
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 9.5e-48 194.5 200 55.0
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 9.5e-48 194.5 200 55.5
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.2e-47 194.1 201 54.7
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.2e-47 194.1 201 54.7
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.2e-47 194.1 200 54.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.2e-47 194.1 200 55.0
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 1.6e-47 193.7 222 51.8
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.6e-47 193.7 200 54.5
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.6e-47 193.7 200 54.5
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.6e-47 193.7 200 54.5
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 2.1e-47 193.4 200 54.0
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 2.8e-47 193.0 200 54.0
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 2.8e-47 193.0 200 55.5
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.8e-47 193.0 200 54.0
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 3.6e-47 192.6 200 54.0
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 3.6e-47 192.6 200 53.5
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 3.6e-47 192.6 200 54.0
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 6.1e-47 191.8 200 55.0
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 6.1e-47 191.8 200 54.0
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 8.0e-47 191.4 233 48.5
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 8.0e-47 191.4 201 53.2
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 8.0e-47 191.4 200 53.5
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 8.0e-47 191.4 200 54.0
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 8.0e-47 191.4 200 54.5
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.0e-46 191.0 200 54.0
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.4e-46 190.7 200 53.5
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.4e-46 190.7 200 54.5
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.4e-46 190.7 200 54.0
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.8e-46 190.3 240 47.1
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.3e-46 189.9 200 54.0
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 2.3e-46 189.9 200 54.0
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 2.3e-46 189.9 200 53.0
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 4.0e-46 189.1 200 53.0
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 4.0e-46 189.1 200 53.0
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 5.2e-46 188.7 200 53.0
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 5.2e-46 188.7 200 53.5
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 5.2e-46 188.7 200 53.0
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 6.8e-46 188.3 200 53.0
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 8.9e-46 188.0 200 53.0
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 8.9e-46 188.0 200 54.0
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.2e-45 187.6 200 52.5
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.2e-45 187.6 200 52.5
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 1.2e-45 187.6 200 53.5
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 1.2e-45 187.6 200 53.5
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.5e-45 187.2 200 53.5
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.5e-45 187.2 200 52.0
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 2.0e-45 186.8 200 53.0
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 2.0e-45 186.8 201 53.2
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.6e-45 186.4 200 52.5
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 2.6e-45 186.4 200 52.5
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 3.4e-45 186.0 201 53.7
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 4.4e-45 185.7 200 52.0
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 5.7e-45 185.3 200 53.0
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 5.7e-45 185.3 200 52.5
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 7.5e-45 184.9 200 53.0
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 9.8e-45 184.5 200 52.5
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.3e-44 184.1 200 52.0
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.3e-44 184.1 199 52.8
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.7e-44 183.7 204 51.5
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.7e-44 183.7 200 53.0
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 4.9e-44 182.2 200 51.5
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 1.4e-43 180.6 200 51.5
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.4e-43 180.6 200 52.0
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 1.8e-43 180.3 200 52.0
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.0e-41 174.5 200 49.5
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 5.0e-41 172.2 200 48.5
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.0e-41 172.2 200 48.0
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.5e-40 170.6 200 48.5
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.6e-39 167.2 179 52.0
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.1e-39 166.8 200 46.5
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 8.0e-39 164.9 200 50.0
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 6.8e-38 161.8 200 44.5
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.4e-37 159.5 199 47.2
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.4e-35 154.1 200 42.0
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 2.4e-35 153.3 200 44.0
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.4e-35 153.3 179 49.2
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 4.1e-35 152.5 201 41.3
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.2e-31 141.0 200 44.0
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 4.7e-31 139.0 155 48.4
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 4.6e-26 122.5 125 58.4
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.1e-22 111.3 179 36.3
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.4e-22 110.9 151 44.4
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 6.8e-22 108.6 153 43.8
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 4.9e-20 102.4 151 41.7
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.2e-18 97.8 194 33.0
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.5e-18 96.3 175 37.1
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.5e-18 96.3 155 40.0
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.6e-18 95.9 72 66.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.5e-16 90.9 194 30.4
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 5.6e-16 89.0 71 64.8
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 5.1e-09 65.9 64 53.1


User provided reference genes

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