Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 3.8e-204 714.5 343 100.0
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 2.8e-162 575.5 345 77.4
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 4.7e-162 574.7 345 76.5
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 2.3e-161 572.4 347 76.9
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.9e-158 562.8 346 76.0
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 9.2e-158 560.5 343 76.1
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 6.0e-157 557.8 344 78.2
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 5.1e-156 554.7 340 77.4
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 6.6e-156 554.3 348 75.0
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.5e-155 552.4 345 74.2
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.6e-155 551.2 345 73.9
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 7.3e-155 550.8 342 76.6
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.1e-154 549.3 344 74.1
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.1e-154 549.3 344 73.5
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 2.8e-154 548.9 344 75.3
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.8e-154 548.9 345 73.6
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 4.7e-154 548.1 345 75.4
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.1e-153 547.0 344 75.9
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.1e-153 547.0 342 76.6
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.4e-153 546.6 342 76.3
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 2.3e-153 545.8 344 75.6
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.2e-152 543.5 344 73.8
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 3.4e-152 542.0 344 76.2
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 3.4e-152 542.0 344 74.4
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.3e-151 540.0 343 74.6
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 2.9e-151 538.9 345 73.0
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 3.7e-151 538.5 340 75.9
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 6.4e-151 537.7 338 73.7
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 6.4e-151 537.7 348 74.7
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.1e-150 537.0 344 75.3
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 4.1e-150 535.0 339 74.0
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 7.8e-149 530.8 375 69.9
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 1.3e-148 530.0 347 74.6
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 2.3e-148 529.3 348 71.0
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 2.3e-148 529.3 343 71.7
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.3e-148 529.3 339 74.0
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.0e-148 528.9 348 74.1
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 5.1e-148 528.1 341 71.8
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 1.1e-147 526.9 345 73.0
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.9e-147 526.2 343 74.1
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 2.5e-147 525.8 339 73.7
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.5e-147 525.8 346 73.4
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 2.5e-147 525.8 337 74.2
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 4.3e-147 525.0 343 72.9
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 5.6e-147 524.6 359 71.0
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 7.3e-147 524.2 343 73.5
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 9.5e-147 523.9 344 74.1
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 1.2e-146 523.5 348 71.6
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.1e-146 522.7 342 72.8
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 3.6e-146 521.9 341 72.7
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 8.1e-146 520.8 348 69.5
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 8.1e-146 520.8 337 73.0
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.1e-145 520.4 344 73.5
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.4e-145 520.0 344 73.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 3.1e-145 518.8 346 71.4
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 5.2e-145 518.1 348 71.6
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.2e-145 518.1 344 73.3
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 6.8e-145 517.7 340 71.2
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 5.8e-144 514.6 343 71.4
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 7.6e-144 514.2 344 72.4
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 9.9e-144 513.8 340 70.6
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 4.9e-143 511.5 327 74.3
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 4.9e-143 511.5 344 71.5
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 8.4e-143 510.8 352 69.6
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 2.4e-142 509.2 344 73.5
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 4.2e-142 508.4 345 68.4
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 7.1e-142 507.7 347 69.5
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 9.2e-142 507.3 346 72.3
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 3.5e-141 505.4 336 73.2
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 3.5e-141 505.4 347 71.5
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 3.5e-141 505.4 347 71.5
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 6.0e-141 504.6 375 67.2
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 7.8e-141 504.2 346 71.4
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 1.3e-140 503.4 347 71.5
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 3.0e-140 502.3 343 71.4
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 6.6e-140 501.1 346 70.8
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 8.7e-140 500.7 340 70.6
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.9e-139 499.6 349 68.5
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 3.3e-139 498.8 339 70.2
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 3.3e-139 498.8 349 68.5
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 1.2e-138 496.9 339 69.0
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 6.2e-138 494.6 291 79.4
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 1.1e-137 493.8 339 70.2
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 4.0e-137 491.9 407 61.2
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 5.3e-137 491.5 350 66.0
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 3.4e-136 488.8 350 65.4
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 9.9e-136 487.3 328 70.1
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 1.3e-135 486.9 346 67.1
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 2.2e-135 486.1 344 67.4
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 1.4e-134 483.4 343 67.6
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 1.9e-134 483.0 341 66.9
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.9e-134 483.0 341 66.3
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 3.2e-134 482.3 343 66.8
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 6.0e-133 478.0 320 70.0
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 1.3e-132 476.9 337 67.1
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.1e-131 473.8 336 68.2
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 1.5e-131 473.4 282 78.0
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.5e-131 472.6 301 75.1
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 2.9e-127 459.1 344 64.8
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 4.2e-126 455.3 341 62.5
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.4e-121 439.5 321 64.8
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 9.0e-121 437.6 338 63.9
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 2.9e-119 432.6 246 79.7
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 7.1e-118 427.9 233 84.5
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 2.7e-117 426.0 250 81.6
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.7e-114 415.6 251 75.3
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 8.2e-114 414.5 251 75.3
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 6.7e-108 394.8 302 62.3
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 2.2e-106 389.8 330 59.4
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 6.3e-106 388.3 321 61.4
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 6.1e-101 371.7 240 76.7
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 9.1e-97 357.8 240 71.2
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-96 357.5 240 71.2
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.2e-96 357.5 328 56.1
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 4.2e-94 349.0 235 72.3
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 7.2e-94 348.2 233 70.4
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 4.7e-93 345.5 239 71.1
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.7e-87 327.0 329 51.7
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 4.2e-86 322.4 245 60.4
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.7e-69 266.5 175 72.6
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 5.4e-65 252.3 248 50.0
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 2.9e-63 246.5 193 62.2
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 3.3e-62 243.0 192 62.0
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 4.7e-61 239.2 165 68.5
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 1.2e-53 214.5 199 51.8
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 2.2e-50 203.8 169 59.8
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.7e-47 194.1 170 59.4
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 1.5e-27 127.9 79 75.9
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 5.8e-27 125.9 73 79.5
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 4.2e-17 93.2 57 70.2
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 1.2e-08 65.1 53 58.5


User provided reference genes

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