Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A292T64 Lonicera japonica HOM05D000499 ORTHO05D002825 7.3e-171 604.0 346 100.0
Dinv08010 Davidia involucrata HOM05D000499 ORTHO05D002825 3.8e-87 325.9 339 59.3
Rhsim06G0096500 Rhododendron simsii HOM05D000499 ORTHO05D002825 2.3e-76 290.0 342 51.5
Actinidia02578 Actinidia chinensis HOM05D000499 ORTHO05D002825 2.0e-75 287.0 339 51.9
vmacro12493 Vaccinium macrocarpon HOM05D000499 ORTHO05D002825 2.9e-74 283.1 341 51.0
CSS0005996 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002825 1.1e-70 271.2 341 50.4
Hma1.2p1_0363F.1_g136640 Hydrangea macrophylla HOM05D000499 ORTHO05D002825 3.1e-68 263.1 349 54.4
Ciclev10000424m.g Citrus clementina HOM05D000499 ORTHO05D002825 1.7e-58 230.7 330 45.2
DCAR_011538 Daucus carota HOM05D000499 ORTHO05D002825 2.4e-57 226.9 344 45.3
TAR381G0002 Trochodendron aralioides HOM05D000499 ORTHO05D002825 4.6e-56 222.6 353 42.8
CiPaw.15G081900 Carya illinoinensis HOM05D000499 ORTHO05D002825 6.6e-55 218.8 345 41.4
Cfa018187 Carpinus fangiana HOM05D000499 ORTHO05D002825 1.1e-54 218.0 354 41.5
Prupe.8G056900 Prunus persica HOM05D000499 ORTHO05D002825 1.4e-52 211.1 350 42.0
MD10G1047500 Malus domestica HOM05D000499 ORTHO05D002825 2.4e-52 210.3 361 41.8
QL02p033904 Quercus lobata HOM05D000499 ORTHO05D002825 7.6e-51 205.3 355 41.4
Cc10_g11380 Coffea canephora HOM05D000499 ORTHO05D002825 9.9e-51 204.9 360 40.8
TAR628G1327 Trochodendron aralioides HOM05D000499 ORTHO05D002825 1.1e-49 201.4 357 41.7
CAN.G1530.3 Capsicum annuum HOM05D000499 ORTHO05D002825 2.4e-49 200.3 351 40.7
Atru.chr13.1795 Acer truncatum HOM05D000499 ORTHO05D002825 5.4e-49 199.1 350 40.9
MD05G1041100 Malus domestica HOM05D000499 ORTHO05D002825 9.3e-49 198.4 349 42.4
Eucgr.F02622 Eucalyptus grandis HOM05D000499 ORTHO05D002825 2.7e-48 196.8 226 51.3
Gohir.D02G065900 Gossypium hirsutum HOM05D000499 ORTHO05D002825 3.5e-48 196.4 340 39.7
Nitab4.5_0000422g0030 Nicotiana tabacum HOM05D000499 ORTHO05D002825 3.5e-48 196.4 319 44.2
Gorai.005G074800 Gossypium raimondii HOM05D000499 ORTHO05D002825 4.6e-48 196.1 340 39.7
Nitab4.5_0000560g0180 Nicotiana tabacum HOM05D000499 ORTHO05D002825 5.1e-47 192.6 319 43.9
Peaxi162Scf00310g00615 Petunia axillaris HOM05D000499 ORTHO05D002825 5.1e-47 192.6 298 44.0
CsaV3_2G033450 Cucumis sativus L. HOM05D000499 ORTHO05D002825 1.1e-46 191.4 369 44.7
Duzib177G0591 Durio zibethinus HOM05D000499 ORTHO05D002825 1.5e-46 191.0 337 39.8
Gohir.A02G060500 Gossypium hirsutum HOM05D000499 ORTHO05D002825 1.9e-46 190.7 340 39.4
TWI60G1011 Tripterygium wilfordii HOM05D000499 ORTHO05D002825 1.9e-46 190.7 344 39.5
CANSAT25G2799 Cannabis sativa HOM05D000499 ORTHO05D002825 3.3e-46 189.9 348 38.5
RcHm_v2.0_Chr6g0272041 Rosa chinensis HOM05D000499 ORTHO05D002825 5.6e-46 189.1 353 40.5
GSVIVG01034490001 Vitis vinifera HOM05D000499 ORTHO05D002825 7.3e-46 188.7 234 49.6
Oeu000548.2 Olea europaea HOM05D000499 ORTHO05D002825 1.6e-45 187.6 345 40.9
Oeu017879.3 Olea europaea HOM05D000499 ORTHO05D002825 2.1e-45 187.2 346 41.0
ClCG11G008200 Citrullus lanatus HOM05D000499 ORTHO05D002825 2.8e-45 186.8 362 37.8
Solyc11g017420.2 Solanum lycopersicum HOM05D000499 ORTHO05D002825 3.6e-45 186.4 351 40.2
Sopen11g009370 Solanum pennellii HOM05D000499 ORTHO05D002825 3.6e-45 186.4 353 40.5
MELO3C008118.2 Cucumis melo HOM05D000499 ORTHO05D002825 6.2e-45 185.7 363 42.1
PGR042G0327 Punica granatum HOM05D000499 ORTHO05D002825 9.0e-44 181.8 215 48.8
Glyma.10G215800 Glycine max HOM05D000499 ORTHO05D002825 1.2e-43 181.4 342 39.2
Sed0014682 Sechium edule HOM05D000499 ORTHO05D002825 5.8e-43 179.1 362 40.9
Glyma.20G176000 Glycine max HOM05D000499 ORTHO05D002825 2.2e-42 177.2 341 38.7
Duzib116G0641 Durio zibethinus HOM05D000499 ORTHO05D002825 1.1e-41 174.9 226 46.0
SalBow7G2285 Salvia bowleyana HOM05D000499 ORTHO05D002825 1.9e-41 174.1 209 51.7
Haze_17928 Corylus avellana HOM05D000499 ORTHO05D002825 2.4e-41 173.7 260 43.5
Nn5g27737 Nelumbo nucifera HOM05D000499 ORTHO05D002825 5.4e-41 172.6 330 38.5
Migut.C01246 Erythranthe guttata HOM05D000499 ORTHO05D002825 9.3e-41 171.8 345 38.8
Lj5g0018648 Lotus japonicus HOM05D000499 ORTHO05D002825 9.3e-41 171.8 223 46.2
SGA_v2.0_scaffold118G32472 Striga asiatica HOM05D000499 ORTHO05D002825 2.7e-40 170.2 225 48.0
Manes.02G191400 Manihot esculenta HOM05D000499 ORTHO05D002825 3.5e-40 169.9 338 36.7
MSTRG.22444 Avicennia marina HOM05D000499 ORTHO05D002825 6.0e-40 169.1 214 50.0
MBI17_g27204_MAGBIO Magnolia biondii HOM05D000499 ORTHO05D002825 6.0e-40 169.1 345 38.8
Phvul.007G090000 Phaseolus vulgaris HOM05D000499 ORTHO05D002825 7.9e-40 168.7 345 36.5
Potri.013G113700 Populus trichocarpa HOM05D000499 ORTHO05D002825 3.0e-39 166.8 351 36.2
HanXRQChr11g0326231 Helianthus annuus HOM05D000499 ORTHO05D002825 8.7e-39 165.2 344 36.9
Hund16800 Selenicereus undatus HOM05D000499 ORTHO05D002825 1.1e-38 164.9 357 37.8
Sabra13G0096300 Salix brachista HOM05D000499 ORTHO05D002825 4.3e-38 162.9 355 36.1
MBI09_g08441_MAGBIO Magnolia biondii HOM05D000499 ORTHO05D002825 7.4e-38 162.2 252 43.7
PSO063G5608 Papaver somniferum HOM05D000499 ORTHO05D002825 1.6e-37 161.0 232 49.6
Lalb_Chr06g0162081 Lupinus albus HOM05D000499 ORTHO05D002825 4.8e-37 159.5 228 47.8
Aqoxy5G02598 Aquilegia oxysepala HOM05D000499 ORTHO05D002825 1.1e-36 158.3 356 36.2
Potri.019G084100 Populus trichocarpa HOM05D000499 ORTHO05D002825 1.4e-36 157.9 340 37.4
CARHR033880 Cardamine hirsuta HOM05D000499 ORTHO05D002825 2.4e-36 157.1 239 48.1
Psat6g187200 Pisum sativum HOM05D000499 ORTHO05D002825 2.4e-36 157.1 231 44.2
Sc01g0001750 Simmondsia chinensis HOM05D000499 ORTHO05D002825 2.4e-36 157.1 352 38.1
Medtr1g096320 Medicago truncatula HOM05D000499 ORTHO05D002825 6.9e-36 155.6 241 43.2
Ca_10611_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002825 1.2e-35 154.8 352 36.4
CARHR260490 Cardamine hirsuta HOM05D000499 ORTHO05D002825 3.4e-35 153.3 253 42.7
Thhalv10006981m.g Eutrema salsugineum HOM05D000499 ORTHO05D002825 5.8e-35 152.5 253 42.7
Manes.18G100500 Manihot esculenta HOM05D000499 ORTHO05D002825 5.8e-35 152.5 347 34.0
Thecc.08G182100 Theobroma cacao HOM05D000499 ORTHO05D002825 5.8e-35 152.5 220 44.5
THA.LOC104813100 Tarenaya hassleriana HOM05D000499 ORTHO05D002825 1.3e-34 151.4 238 42.9
AT1G34550 Arabidopsis thaliana HOM05D000499 ORTHO05D002825 2.9e-34 150.2 287 39.7
Sp1g29670 Schrenkiella parvula HOM05D000499 ORTHO05D002825 4.9e-34 149.4 249 42.6
AL6G43230 Arabidopsis lyrata HOM05D000499 ORTHO05D002825 1.4e-33 147.9 250 41.2
Hund27083 Selenicereus undatus HOM05D000499 ORTHO05D002825 1.4e-33 147.9 350 35.4
Carub.0001s3257 Capsella rubella HOM05D000499 ORTHO05D002825 1.9e-33 147.5 242 43.8
AUR62023570 Chenopodium quinoa HOM05D000499 ORTHO05D002825 1.9e-33 147.5 295 42.4
BcaC07g37537 Brassica carinata HOM05D000499 ORTHO05D002825 2.5e-33 147.1 236 42.4
EL10Ac1g00077 Beta vulgaris HOM05D000499 ORTHO05D002825 3.2e-33 146.7 357 35.3
AUR62004651 Chenopodium quinoa HOM05D000499 ORTHO05D002825 3.2e-33 146.7 251 41.8
THA.LOC104806784 Tarenaya hassleriana HOM05D000499 ORTHO05D002825 3.2e-33 146.7 228 43.9
Lsat_1_v5_gn_4_133620 Lactuca sativa HOM05D000499 ORTHO05D002825 7.1e-33 145.6 235 43.4
Aa31LG9G14920 Aethionema arabicum HOM05D000499 ORTHO05D002825 3.5e-32 143.3 243 41.6
AT4G09630 Arabidopsis thaliana HOM05D000499 ORTHO05D002825 4.6e-32 142.9 246 41.1
BraA08t32841Z Brassica rapa HOM05D000499 ORTHO05D002825 6.0e-32 142.5 210 44.3
VMungo0720G1508 Vigna mungo HOM05D000499 ORTHO05D002825 5.1e-31 139.4 348 34.5
Lalb_Chr02g0141831 Lupinus albus HOM05D000499 ORTHO05D002825 6.7e-31 139.0 217 46.5
AL1G49050 Arabidopsis lyrata HOM05D000499 ORTHO05D002825 1.1e-30 138.3 240 40.8
A09p32070 Brassica napus HOM05D000499 ORTHO05D002825 1.1e-30 138.3 250 39.2
A08p08230 Brassica napus HOM05D000499 ORTHO05D002825 1.5e-30 137.9 211 43.6
BolC8t47853H Brassica oleracea HOM05D000499 ORTHO05D002825 4.3e-30 136.3 213 43.2
C06p11490 Brassica napus HOM05D000499 ORTHO05D002825 1.3e-29 134.8 221 41.6
Ah.05g178060 Amaranthus hybridus HOM05D000499 ORTHO05D002825 4.8e-29 132.9 256 39.5
arahy.Tifrunner.gnm1.ann1.I4M8AP Arachis hypogaea HOM05D000499 ORTHO05D002825 1.1e-28 131.7 225 40.0
Cpa.g.sc66.49 Carica papaya HOM05D000499 ORTHO05D002825 1.8e-28 131.0 338 35.5
Sabra19G0095400 Salix brachista HOM05D000499 ORTHO05D002825 1.8e-28 131.0 346 34.1
Aa31LG6G8470 Aethionema arabicum HOM05D000499 ORTHO05D002825 2.4e-28 130.6 270 37.8
PSO017G3501 Papaver somniferum HOM05D000499 ORTHO05D002825 4.0e-28 129.8 354 37.0
arahy.Tifrunner.gnm1.ann1.TF9Q1X Arachis hypogaea HOM05D000499 ORTHO05D002825 2.0e-27 127.5 225 39.6
BcaC08g43773 Brassica carinata HOM05D000499 ORTHO05D002825 5.8e-27 125.9 346 33.8
BraA09t38742Z Brassica rapa HOM05D000499 ORTHO05D002825 5.8e-27 125.9 258 38.0
CDE04G3772 Ceratophyllum demersum HOM05D000628 ORTHO05D001121 5.8e-27 125.9 214 40.2
BcaB04g17867 Brassica carinata HOM05D000499 ORTHO05D002825 9.3e-25 118.6 218 40.4
TPR.G8819 Trifolium pratense HOM05D000499 ORTHO05D002825 1.2e-24 118.2 198 43.4
CDE02G4177 Ceratophyllum demersum HOM05D000499 ORTHO05D002825 1.3e-23 114.8 234 35.9
Carub.0006s2807 Capsella rubella HOM05D000499 ORTHO05D002825 8.7e-23 112.1 245 35.1
BolC6t36282H Brassica oleracea HOM05D000499 ORTHO05D002825 3.4e-19 100.1 361 30.2
FvH4_2g11770 Fragaria vesca HOM05D000499 ORTHO05D002825 1.1e-17 95.1 232 35.8
SalBow6G3080 Salvia bowleyana HOM05D000499 ORTHO05D002825 4.6e-16 89.7 345 30.4
HPP92_019387 Vanilla planifolia HOM05D000499 ORTHO05D002825 2.3e-15 87.4 217 34.6
Dinv41706 Davidia involucrata HOM05D000499 ORTHO05D002825 5.1e-15 86.3 81 60.5
CAN.G370.21 Capsicum annuum HOM05D000499 ORTHO05D002825 1.5e-14 84.7 89 53.9
unitig_0.g916 Utricularia gibba HOM05D000499 ORTHO05D002825 3.3e-14 83.6 124 39.5
Aqoxy6G00132 Aquilegia oxysepala HOM05D000499 ORTHO05D002825 1.3e-13 81.6 296 29.7
VMungo1215G3177 Vigna mungo HOM05D000499 ORTHO05D002825 2.8e-13 80.5 67 58.2
FAN15G1160 Fragaria x ananassa HOM05D000499 ORTHO05D002825 3.7e-13 80.1 234 35.0
FAN24G1280 Fragaria x ananassa HOM05D000499 ORTHO05D002825 4.8e-13 79.7 230 33.5
FAN20G2905 Fragaria x ananassa HOM05D000499 ORTHO05D002825 1.1e-12 78.6 232 34.5
ATR0152G026 Amborella trichopoda HOM05D000499 ORTHO05D002825 1.7e-10 71.2 308 28.6
Zm00001eb168880 Zea mays HOM05D000499 ORTHO05D002825 4.7e-08 63.2 147 36.7
COL.COLO4_36439 Corchorus olitorius HOM05D000499 ORTHO05D002825 5.1e-07 59.7 191 34.0
Os11g0198100 Oryza sativa ssp. japonica HOM05D000499 ORTHO05D002825 7.4e-06 55.8 188 30.9


User provided reference genes

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