Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 1.2e-71 273.1 145 100.0
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 5.1e-33 144.8 136 60.3
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 4.3e-32 141.7 107 67.3
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 4.3e-32 141.7 107 66.4
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 4.3e-32 141.7 90 76.7
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 7.4e-32 141.0 142 57.0
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 7.4e-32 141.0 90 76.7
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.6e-31 139.8 90 75.6
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.6e-31 139.8 90 75.6
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 2.1e-31 139.4 90 74.4
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 2.1e-31 139.4 90 76.7
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 4.8e-31 138.3 106 67.9
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.8e-30 136.3 89 73.0
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 2.4e-30 136.0 88 73.9
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 2.4e-30 136.0 133 59.4
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 2.4e-30 136.0 90 75.6
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 4.0e-30 135.2 90 72.2
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 4.0e-30 135.2 88 77.3
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 9.0e-30 134.0 94 72.3
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 9.0e-30 134.0 135 56.3
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 1.2e-29 133.7 108 63.9
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 1.2e-29 133.7 133 57.1
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.5e-29 133.3 133 57.1
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 2.0e-29 132.9 90 76.7
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 2.0e-29 132.9 90 73.3
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 4.5e-29 131.7 93 73.1
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 5.8e-29 131.3 86 76.7
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 5.8e-29 131.3 90 78.9
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 5.8e-29 131.3 130 56.2
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 7.6e-29 131.0 86 75.6
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 9.9e-29 130.6 143 51.0
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 2.9e-28 129.0 86 74.4
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 2.9e-28 129.0 86 74.4
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 2.9e-28 129.0 86 74.4
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 2.9e-28 129.0 86 74.4
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.9e-28 129.0 86 74.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 4.9e-28 128.3 111 63.1
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 4.9e-28 128.3 86 77.9
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 6.4e-28 127.9 130 55.4
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 6.4e-28 127.9 125 56.0
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 6.4e-28 127.9 108 63.0
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 6.4e-28 127.9 108 61.1
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 8.4e-28 127.5 129 54.3
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.1e-27 127.1 86 73.3
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.1e-27 127.1 86 70.9
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 1.1e-27 127.1 92 72.8
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 1.1e-27 127.1 88 77.3
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.4e-27 126.7 108 62.0
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.9e-27 126.3 86 73.3
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 2.4e-27 125.9 135 56.3
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 3.2e-27 125.6 90 72.2
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 3.2e-27 125.6 90 70.0
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 5.5e-27 124.8 90 70.0
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 2.1e-26 122.9 90 72.2
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 4.6e-26 121.7 129 52.7
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 7.9e-26 120.9 91 71.4
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 4.0e-22 108.6 90 63.3
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 5.3e-22 108.2 169 43.2
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 5.8e-21 104.8 76 67.1
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 2.5e-19 99.4 66 69.7
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 5.5e-19 98.2 90 54.4
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.2e-18 97.1 70 70.0
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 4.6e-18 95.1 74 63.5
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 6.0e-18 94.7 84 57.1
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 3.0e-17 92.4 60 75.0
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 3.0e-17 92.4 106 46.2
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 5.1e-17 91.7 65 69.2
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 9.7e-16 87.4 132 39.4
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 9.0e-14 80.9 62 67.7
Lj7C284T6 Lonicera japonica HOM05D000307 ORTHO05D000166 1.1e-08 63.9 57 63.2
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 2.8e-07 59.3 113 31.9
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 1.8e-06 56.6 135 28.9


User provided reference genes

Program Settings