Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 9.2e-26 119.4 58 100.0
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 5.2e-21 103.6 49 100.0
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.5e-12 75.5 49 73.5
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 9.8e-12 72.8 57 57.9
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 9.8e-12 72.8 49 71.4
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.3e-11 72.4 49 69.4
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.3e-11 72.4 49 69.4
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.7e-11 72.0 57 57.9
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 1.7e-11 72.0 57 57.9
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.7e-11 72.0 49 69.4
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 1.7e-11 72.0 49 69.4
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.2e-11 71.6 57 57.9
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 2.2e-11 71.6 49 69.4
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 2.2e-11 71.6 49 67.3
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.2e-11 71.6 49 69.4
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 2.9e-11 71.2 49 67.3
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 3.7e-11 70.9 49 67.3
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 3.7e-11 70.9 48 64.6
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 4.9e-11 70.5 50 62.0
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 4.9e-11 70.5 49 69.4
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 4.9e-11 70.5 49 67.3
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 6.4e-11 70.1 49 69.4
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 6.4e-11 70.1 57 56.1
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 6.4e-11 70.1 49 67.3
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 8.3e-11 69.7 49 63.3
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 8.3e-11 69.7 49 67.3
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 8.3e-11 69.7 49 69.4
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 1.1e-10 69.3 49 67.3
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 1.1e-10 69.3 49 67.3
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.4e-10 68.9 57 54.4
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.4e-10 68.9 49 67.3
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 1.4e-10 68.9 49 67.3
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.9e-10 68.6 49 65.3
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 1.9e-10 68.6 49 65.3
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.9e-10 68.6 49 67.3
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 2.4e-10 68.2 49 65.3
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 2.4e-10 68.2 49 63.3
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.2e-10 67.8 49 63.3
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 3.2e-10 67.8 48 66.7
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 3.2e-10 67.8 49 65.3
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.2e-10 67.8 49 65.3
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.2e-10 67.8 49 65.3
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 4.1e-10 67.4 49 63.3
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 5.4e-10 67.0 49 65.3
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 7.1e-10 66.6 57 52.6
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 7.1e-10 66.6 49 63.3
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 7.1e-10 66.6 49 63.3
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 7.1e-10 66.6 49 67.3
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 9.2e-10 66.2 49 65.3
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 9.2e-10 66.2 49 61.2
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 9.2e-10 66.2 49 63.3
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 9.2e-10 66.2 49 65.3
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 9.2e-10 66.2 49 65.3
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 9.2e-10 66.2 51 62.7
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.2e-09 65.9 49 59.2
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 1.2e-09 65.9 49 67.3
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.2e-09 65.9 49 61.2
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.2e-09 65.9 56 60.7
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 1.6e-09 65.5 57 52.6
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 1.6e-09 65.5 49 63.3
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.6e-09 65.5 49 63.3
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 2.1e-09 65.1 49 59.2
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 2.1e-09 65.1 49 59.2
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.1e-09 65.1 49 61.2
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 2.1e-09 65.1 46 65.2
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 2.1e-09 65.1 49 63.3
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.7e-09 64.7 49 63.3
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.7e-09 64.7 50 58.0
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 2.7e-09 64.7 49 61.2
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 2.7e-09 64.7 49 65.3
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 4.6e-09 63.9 49 63.3
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 4.6e-09 63.9 49 65.3
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 6.0e-09 63.5 49 65.3
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 7.8e-09 63.2 49 57.1
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 7.8e-09 63.2 49 57.1
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 7.8e-09 63.2 49 63.3
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 7.8e-09 63.2 49 63.3
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 1.0e-08 62.8 49 63.3
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.0e-08 62.8 49 63.3
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.0e-08 62.8 49 59.2
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.7e-08 62.0 49 63.3
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 1.7e-08 62.0 49 57.1
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 2.3e-08 61.6 49 61.2
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 2.3e-08 61.6 49 67.3
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 2.3e-08 61.6 49 57.1
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 6.6e-08 60.1 49 59.2
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 6.6e-08 60.1 49 57.1
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 4.3e-07 57.4 49 53.1
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 5.6e-07 57.0 49 57.1
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 7.3e-07 56.6 49 59.2
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 1.6e-06 55.5 49 59.2
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 3.6e-06 54.3 49 55.1
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 6.2e-06 53.5 49 53.1
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 6.2e-06 53.5 49 51.0


User provided reference genes

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