Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.1e-173 613.2 308 100.0
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 8.1e-113 411.0 318 65.7
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.2e-110 402.9 317 65.6
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 5.4e-109 398.3 323 63.8
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 9.3e-109 397.5 317 62.8
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 7.6e-103 377.9 315 60.6
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 6.4e-102 374.8 318 59.7
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 6.0e-100 368.2 310 59.7
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 8.7e-99 364.4 316 60.1
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 8.7e-99 364.4 316 57.6
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 8.7e-99 364.4 324 57.1
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.1e-98 364.0 322 59.6
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 1.1e-98 364.0 316 57.6
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.5e-98 363.6 322 57.8
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.5e-98 363.6 322 58.7
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.5e-98 362.8 316 57.6
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.5e-98 362.8 316 57.6
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 3.3e-98 362.5 316 57.3
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 4.3e-98 362.1 317 61.5
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 9.6e-98 360.9 321 59.8
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.3e-97 360.5 323 61.3
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 4.8e-97 358.6 308 59.1
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.1e-96 357.5 316 60.4
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.1e-96 357.5 322 59.0
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 1.4e-96 357.1 323 58.5
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.8e-96 356.7 322 58.4
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 1.8e-96 356.7 323 60.4
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 6.9e-96 354.8 312 59.6
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 9.0e-96 354.4 311 58.8
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 1.5e-95 353.6 318 57.2
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 5.8e-95 351.7 324 55.9
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.3e-94 350.5 314 56.1
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 1.7e-94 350.1 316 55.7
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.7e-94 350.1 324 56.5
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 2.9e-94 349.4 317 59.0
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 8.4e-94 347.8 324 57.1
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.1e-93 347.4 311 57.2
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.4e-93 347.1 316 58.9
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.1e-93 344.7 316 58.2
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 2.1e-92 343.2 327 55.7
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 2.7e-92 342.8 321 57.0
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 3.5e-92 342.4 317 57.1
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 4.6e-92 342.0 316 59.8
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 6.0e-92 341.7 322 55.6
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.0e-91 340.9 321 55.1
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 2.3e-91 339.7 318 57.5
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.1e-90 337.4 371 51.8
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 1.5e-90 337.0 322 58.7
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 1.9e-90 336.7 319 54.5
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 1.6e-89 333.6 324 52.8
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.1e-88 330.9 318 56.9
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 3.1e-88 329.3 318 53.8
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 9.0e-88 327.8 319 54.9
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.2e-87 327.4 163 98.8
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.0e-87 326.6 309 54.7
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 2.0e-87 326.6 321 55.8
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 2.6e-87 326.2 310 53.2
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.4e-87 325.9 321 54.8
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 1.9e-85 320.1 318 54.1
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 2.5e-85 319.7 322 53.1
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.2e-85 319.3 320 53.1
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 4.2e-85 318.9 314 53.5
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 3.5e-84 315.8 315 51.7
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 7.9e-84 314.7 314 50.0
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 7.9e-84 314.7 316 53.5
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.5e-82 309.7 311 52.4
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.8e-81 306.2 313 50.8
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 4.8e-81 305.4 313 51.1
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 6.3e-81 305.1 323 52.9
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 3.1e-80 302.8 315 52.1
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 4.1e-80 302.4 315 51.4
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.0e-79 300.1 397 47.6
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.0e-79 300.1 333 52.0
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.7e-78 297.0 315 51.7
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.2e-78 296.6 313 50.2
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 2.2e-78 296.6 315 51.4
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 5.0e-78 295.4 315 51.7
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 5.0e-78 295.4 310 52.9
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 8.5e-78 294.7 310 50.3
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 1.1e-77 294.3 313 50.5
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 1.9e-77 293.5 313 50.5
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.1e-76 290.0 308 49.4
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 6.1e-76 288.5 317 50.5
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 1.0e-75 287.7 236 62.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.0e-75 287.7 441 42.9
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 3.0e-75 286.2 323 49.8
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 1.5e-74 283.9 318 50.3
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 7.4e-74 281.6 313 51.4
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 1.1e-72 277.7 330 49.4
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 4.1e-72 275.8 267 55.8
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 7.7e-71 271.6 334 47.3
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.7e-70 270.4 279 52.0
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 3.8e-70 269.2 231 58.9
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 6.5e-70 268.5 287 50.9
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.1e-69 267.7 303 51.2
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 5.5e-69 265.4 322 45.3
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 2.1e-68 263.5 314 47.8
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 7.9e-68 261.5 316 49.7
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.0e-66 256.9 228 57.5
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 9.7e-66 254.6 260 55.4
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 4.8e-65 252.3 326 45.7
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 4.8e-65 252.3 342 45.3
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 9.1e-64 248.1 308 46.1
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.9e-62 243.0 259 50.2
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 3.8e-62 242.7 265 47.9
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 8.0e-60 235.0 250 48.0
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 8.0e-60 235.0 337 40.4
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.5e-58 230.7 288 49.0
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.3e-57 227.6 303 44.2
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.2e-57 226.9 393 40.2
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 7.0e-56 221.9 336 38.7
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.1e-53 214.5 283 44.5
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 2.3e-51 206.8 218 49.1
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.4e-48 197.6 325 36.9
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 7.0e-48 195.3 314 38.2
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 4.5e-47 192.6 326 37.4
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 2.2e-46 190.3 196 51.5
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 5.0e-46 189.1 309 37.9
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 1.1e-45 188.0 323 33.4
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 1.7e-41 174.1 244 42.6
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 1.3e-38 164.5 230 43.9
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 1.9e-37 160.6 312 34.9
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 4.7e-20 102.8 49 100.0
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 7.5e-18 95.5 55 76.4
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 8.9e-11 72.0 62 59.7
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 8.9e-11 72.0 69 56.5
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.4e-08 63.9 51 58.8


User provided reference genes

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