Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 2.2e-168 595.5 289 100.0
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.1e-167 593.2 289 99.7
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.4e-159 566.2 289 94.1
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 4.5e-158 561.2 288 92.4
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 5.9e-158 560.8 289 91.3
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.9e-158 560.8 289 93.1
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.0e-157 560.1 289 92.7
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 1.7e-157 559.3 289 92.4
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.7e-157 559.3 289 93.1
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.7e-157 559.3 289 93.1
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 2.3e-157 558.9 288 92.7
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 2.3e-157 558.9 289 92.7
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 2.9e-157 558.5 288 91.7
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.9e-157 558.5 289 92.7
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 3.8e-157 558.1 289 92.7
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 3.8e-157 558.1 289 92.0
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 5.0e-157 557.8 289 91.7
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 5.0e-157 557.8 289 92.7
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 5.0e-157 557.8 288 92.0
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 6.6e-157 557.4 289 92.4
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 6.6e-157 557.4 289 91.7
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 8.6e-157 557.0 286 92.7
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.5e-156 556.2 289 91.3
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.5e-156 556.2 289 91.3
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.9e-156 555.8 289 91.0
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 2.5e-156 555.4 286 92.0
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 2.5e-156 555.4 289 92.7
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 3.3e-156 555.1 289 92.4
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 3.3e-156 555.1 289 91.3
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 4.3e-156 554.7 288 92.0
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 5.6e-156 554.3 286 92.3
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 7.3e-156 553.9 288 91.0
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 7.3e-156 553.9 289 92.4
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 1.2e-155 553.1 289 90.7
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 1.2e-155 553.1 289 92.0
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.2e-155 553.1 289 91.0
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.2e-155 553.1 289 91.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.1e-155 552.4 289 91.3
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.6e-155 551.6 289 91.3
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 3.6e-155 551.6 289 91.0
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 3.6e-155 551.6 286 90.9
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 4.7e-155 551.2 289 91.3
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 8.0e-155 550.4 289 90.3
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 8.0e-155 550.4 289 90.3
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.4e-154 549.7 289 91.0
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.4e-154 549.7 289 90.3
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.8e-154 549.3 288 91.0
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.8e-154 549.3 289 89.6
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 2.3e-154 548.9 289 90.3
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 2.3e-154 548.9 289 90.0
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 3.0e-154 548.5 289 90.7
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 3.0e-154 548.5 289 90.3
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 3.0e-154 548.5 289 90.7
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 4.0e-154 548.1 289 90.3
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 5.2e-154 547.7 289 90.3
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.8e-154 547.4 289 89.6
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 8.9e-154 547.0 289 90.3
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 8.9e-154 547.0 289 90.0
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 8.9e-154 547.0 289 91.0
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 8.9e-154 547.0 289 89.6
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.2e-153 546.6 289 90.0
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 2.0e-153 545.8 287 89.2
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 3.4e-153 545.0 289 89.6
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 4.4e-153 544.7 289 88.9
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.3e-152 543.1 289 89.6
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.3e-152 543.1 289 90.0
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 1.3e-152 543.1 289 88.9
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 2.2e-152 542.3 286 89.5
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 2.2e-152 542.3 289 88.6
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 2.2e-152 542.3 289 89.3
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 4.9e-152 541.2 286 89.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 6.4e-152 540.8 286 89.9
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 8.3e-152 540.4 289 89.6
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 8.3e-152 540.4 286 89.9
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 8.3e-152 540.4 286 89.9
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.1e-151 540.0 289 88.9
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.1e-151 540.0 289 88.6
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.1e-151 540.0 289 89.3
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 1.1e-151 540.0 289 88.9
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.1e-151 540.0 286 89.5
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.4e-151 539.7 289 88.9
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.4e-151 539.7 289 89.3
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 1.9e-151 539.3 286 89.5
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.4e-151 538.9 289 89.3
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.4e-151 538.9 289 89.3
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 3.2e-151 538.5 286 89.5
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 4.1e-151 538.1 286 89.2
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 5.4e-151 537.7 289 88.9
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 9.2e-151 537.0 289 88.9
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 9.2e-151 537.0 289 88.9
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.2e-150 536.6 286 89.2
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.6e-150 536.2 289 87.5
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.6e-150 536.2 289 88.6
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 6.0e-150 534.3 289 87.5
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.0e-149 533.5 286 87.8
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.0e-149 533.5 320 82.2
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 3.0e-149 531.9 289 87.2
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.5e-148 529.6 289 86.9
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 5.6e-148 527.7 286 86.4
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 1.7e-144 516.2 288 85.4
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 4.9e-144 514.6 263 93.5
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.0e-141 506.9 286 81.8
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 2.5e-140 502.3 286 82.2
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 3.6e-139 498.4 293 81.2
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.4e-138 496.5 286 80.8
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 9.9e-137 490.3 286 81.1
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 1.0e-133 480.3 286 82.5
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.1e-132 476.9 249 90.4
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 8.4e-128 460.7 288 74.3
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 2.8e-115 419.1 286 66.8
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.1e-114 417.2 286 66.1
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 5.1e-109 398.3 285 70.2
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.7e-107 392.1 189 96.8
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.4e-106 389.4 236 80.1
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 9.7e-84 314.3 159 91.8
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.0e-80 302.0 171 82.5
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.8e-77 291.2 147 91.2
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.7e-59 233.8 135 82.2
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.0e-57 226.9 136 79.4
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 7.7e-49 198.4 140 72.9
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.8e-46 189.9 135 69.6
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.1e-42 176.0 152 58.6
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.9e-40 169.9 84 94.0
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 3.4e-36 156.4 97 77.3
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 7.3e-31 138.7 105 64.8


User provided reference genes

Program Settings