Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 0.0e+00 1560.4 973 100.0
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 2.1e-276 956.1 1063 68.0
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 4.1e-243 845.5 1026 64.9
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 5.3e-243 845.1 926 66.2
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 3.2e-240 835.9 916 67.0
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 3.1e-235 819.3 924 68.1
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 2.2e-233 813.1 862 72.3
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 3.9e-230 802.4 1023 63.1
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 2.2e-225 786.6 1007 62.2
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 2.5e-224 783.1 1004 62.9
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 3.2e-224 782.7 916 65.9
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 6.7e-222 775.0 917 65.9
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 2.0e-221 773.5 966 63.1
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 5.7e-221 771.9 908 66.5
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 4.7e-215 752.3 1000 61.2
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 8.0e-215 751.5 919 62.0
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 2.0e-213 746.9 899 62.5
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 4.4e-213 745.7 909 62.3
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 1.3e-212 744.2 931 61.4
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 2.2e-212 743.4 840 69.9
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 1.4e-211 740.7 831 69.3
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 7.0e-211 738.4 1016 60.6
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 1.5e-208 730.7 909 64.4
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 7.2e-208 728.4 1022 59.3
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 9.5e-208 728.0 963 61.9
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 1.2e-207 727.6 907 59.3
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 3.6e-207 726.1 955 62.7
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 1.4e-206 724.2 907 59.3
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 2.0e-205 720.3 878 64.0
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 5.7e-205 718.8 975 61.8
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 5.7e-205 718.8 931 58.4
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 7.5e-205 718.4 1014 57.9
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 1.3e-204 717.6 907 63.5
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 3.7e-204 716.1 811 67.0
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 5.4e-203 712.2 995 60.1
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 1.6e-202 710.7 1012 58.7
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 8.6e-201 704.9 801 69.0
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 3.6e-199 699.5 1018 57.9
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 3.6e-199 699.5 925 62.2
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 3.6e-199 699.5 922 63.2
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 2.3e-198 696.8 807 64.6
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 9.8e-197 691.4 923 61.1
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 3.2e-195 686.4 964 59.2
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 1.6e-194 684.1 805 67.6
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.6e-194 684.1 915 55.2
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.7e-194 683.3 911 61.8
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.7e-194 683.3 985 57.8
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.3e-193 681.0 903 62.0
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 1.7e-193 680.6 802 67.1
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 6.6e-193 678.7 903 59.8
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 3.3e-192 676.4 925 58.4
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 7.3e-192 675.2 910 61.8
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 2.8e-191 673.3 841 62.2
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 3.1e-190 669.8 804 66.7
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 3.1e-190 669.8 892 62.1
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 4.0e-190 669.5 903 61.2
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 8.9e-190 668.3 802 63.6
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 8.9e-190 668.3 945 54.7
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 3.4e-189 666.4 826 64.5
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.4e-189 666.4 879 61.1
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 7.5e-189 665.2 811 65.5
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.3e-188 664.5 849 64.5
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 1.4e-187 661.0 806 66.1
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 1.9e-187 660.6 904 61.1
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 2.4e-187 660.2 803 65.6
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 9.2e-187 658.3 809 64.5
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 4.6e-186 656.0 919 59.1
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 4.6e-186 656.0 974 56.7
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 6.0e-186 655.6 901 58.8
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 1.0e-185 654.8 809 64.8
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.0e-185 653.3 1018 56.6
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 3.9e-185 652.9 881 60.0
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 5.0e-185 652.5 1018 56.6
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 6.6e-185 652.1 932 59.0
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 1.5e-184 651.0 878 59.0
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 1.2e-183 647.9 802 62.1
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 2.8e-183 646.7 806 64.8
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 3.6e-183 646.4 906 60.7
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.1e-182 644.8 904 60.1
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 1.1e-182 644.8 831 60.4
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 3.1e-182 643.3 994 58.1
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 1.2e-181 641.3 946 59.0
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 1.5e-181 641.0 799 66.1
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 1.5e-181 641.0 807 61.8
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 2.9e-180 636.7 826 62.8
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 3.7e-180 636.3 882 59.6
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 1.9e-179 634.0 852 60.0
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 2.4e-179 633.6 848 62.9
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.1e-179 632.9 885 59.9
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 1.2e-178 631.3 807 62.6
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 8.6e-177 625.2 803 63.6
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 5.6e-176 622.5 1007 55.2
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 1.6e-175 620.9 743 64.1
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 4.7e-175 619.4 887 57.8
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 2.4e-174 617.1 808 60.6
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.8e-172 609.8 806 61.8
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 3.0e-169 600.1 915 53.1
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 8.7e-169 598.6 919 54.8
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 4.7e-167 592.8 869 56.7
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 5.8e-165 585.9 847 57.5
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 5.8e-165 585.9 807 59.0
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 9.9e-165 585.1 868 54.3
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 1.4e-163 581.3 868 54.0
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 1.4e-163 581.3 868 54.0
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 2.4e-163 580.5 806 60.3
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 5.4e-163 579.3 806 62.5
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 1.6e-162 577.8 842 55.6
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 4.6e-162 576.2 845 58.3
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 5.1e-161 572.8 909 54.1
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 1.9e-160 570.9 794 56.9
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 2.5e-160 570.5 879 54.5
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 3.3e-160 570.1 919 52.8
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 4.3e-160 569.7 829 55.1
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 9.6e-160 568.5 806 58.2
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 2.6e-157 560.5 950 53.8
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 1.3e-156 558.1 921 53.3
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 3.5e-154 550.1 845 57.0
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 6.0e-154 549.3 814 57.4
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 1.3e-153 548.1 917 54.4
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 3.9e-153 546.6 909 53.2
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 3.9e-153 546.6 909 53.2
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 4.0e-150 536.6 849 54.9
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 6.9e-150 535.8 945 52.0
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 6.9e-150 535.8 700 66.1
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 9.0e-150 535.4 931 52.0
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 9.0e-150 535.4 946 51.9
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 1.2e-149 535.0 795 52.5
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 2.0e-149 534.3 802 56.9
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 4.5e-149 533.1 903 54.7
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 9.9e-149 531.9 807 50.8
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 3.8e-148 530.0 794 55.5
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 3.8e-148 530.0 834 50.6
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 1.4e-147 528.1 889 50.7
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 1.9e-147 527.7 852 55.3
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 5.5e-147 526.2 880 50.6
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 1.2e-146 525.0 889 51.6
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.6e-146 524.6 757 56.0
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 2.3e-145 520.8 880 50.2
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 1.6e-143 514.6 684 63.2
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 6.9e-142 509.2 805 55.9
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 3.8e-140 503.4 691 60.9
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.7e-132 478.0 898 50.8
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 2.9e-132 477.2 889 45.3
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 5.5e-131 473.0 700 60.9
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.7e-127 461.5 890 50.3
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 9.7e-120 435.6 884 41.4
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 1.3e-119 435.3 796 49.6
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 3.5e-109 400.6 667 60.3
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.9e-107 394.8 830 48.2
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 8.8e-105 386.0 514 58.4
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 4.4e-104 383.6 531 50.8
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.3e-103 382.1 612 49.0
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 1.0e-100 372.5 666 56.6
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 3.0e-97 360.9 966 33.0
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 6.8e-97 359.8 661 59.9
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 1.5e-96 358.6 419 58.2
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.1e-94 350.9 933 38.3
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 7.7e-93 346.3 694 45.0
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-92 345.9 500 47.0
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 2.3e-89 334.7 710 46.9
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 6.8e-81 306.6 296 68.6
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 5.0e-76 290.4 629 48.6
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 9.2e-70 269.6 245 71.0
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 3.0e-68 264.6 311 65.6
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 2.3e-60 238.4 138 84.8
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 2.3e-52 211.8 212 55.7
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 2.0e-48 198.7 307 44.0
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 5.5e-30 137.5 73 89.0
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.6e-29 134.4 180 46.1
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 3.9e-28 131.3 88 77.3
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 2.4e-25 122.1 120 58.3
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 6.9e-25 120.6 167 49.7
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 2.9e-15 88.6 90 54.4
Lju170A26G31 Lonicera japonica HOM05D000005 ORTHO05D007073 7.9e-13 80.5 50 78.0
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 7.9e-13 80.5 176 34.1
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 1.5e-11 76.3 236 52.1
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 7.2e-06 57.4 52 51.9


User provided reference genes

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