Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.3e-47 192.6 90 100.0
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.7e-42 175.6 90 90.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 3.7e-42 174.5 90 91.1
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 6.4e-42 173.7 90 88.9
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 6.4e-42 173.7 90 88.9
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 6.4e-42 173.7 90 88.9
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 8.3e-42 173.3 90 87.8
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 8.3e-42 173.3 90 87.8
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 8.3e-42 173.3 90 88.9
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.9e-41 172.2 90 91.1
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.4e-41 171.8 90 88.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.4e-41 171.8 90 87.8
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 2.4e-41 171.8 90 87.8
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.2e-41 171.4 90 88.9
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.1e-41 171.0 90 88.9
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.1e-41 171.0 90 88.9
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 5.4e-41 170.6 90 87.8
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 5.4e-41 170.6 90 87.8
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 5.4e-41 170.6 90 87.8
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.4e-41 170.6 90 87.8
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 7.0e-41 170.2 90 87.8
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 7.0e-41 170.2 90 86.7
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 1.2e-40 169.5 90 87.8
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.6e-40 169.1 90 85.6
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.6e-40 169.1 90 85.6
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.6e-40 169.1 90 85.6
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 1.6e-40 169.1 90 85.6
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.6e-40 169.1 91 87.9
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.0e-40 168.7 90 85.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.7e-40 168.3 90 85.6
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 4.6e-40 167.5 90 85.6
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 6.0e-40 167.2 88 86.4
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 6.0e-40 167.2 88 86.4
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 6.0e-40 167.2 96 84.4
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 7.8e-40 166.8 90 85.6
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.3e-39 166.0 90 85.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.3e-39 166.0 90 84.4
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.3e-39 166.0 90 84.4
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.3e-39 166.0 90 83.3
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.7e-39 165.6 90 85.6
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.7e-39 165.6 90 85.6
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 2.3e-39 165.2 90 84.4
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 2.3e-39 165.2 90 88.9
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 3.0e-39 164.9 90 84.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.9e-39 164.5 90 84.4
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 3.9e-39 164.5 90 84.4
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.0e-39 164.1 90 84.4
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 5.0e-39 164.1 89 87.6
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 8.6e-39 163.3 90 84.4
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 8.6e-39 163.3 90 84.4
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 8.6e-39 163.3 91 84.6
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.5e-38 162.5 90 84.4
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 1.9e-38 162.2 87 88.5
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.9e-38 162.2 90 84.4
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.9e-38 162.2 89 86.5
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.9e-38 162.2 90 84.4
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 2.5e-38 161.8 90 84.4
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.5e-38 161.8 90 83.3
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 2.5e-38 161.8 90 84.4
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 4.3e-38 161.0 90 83.3
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 4.3e-38 161.0 90 83.3
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 4.3e-38 161.0 90 84.4
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 5.6e-38 160.6 90 83.3
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 5.6e-38 160.6 90 83.3
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 5.6e-38 160.6 90 83.3
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 5.6e-38 160.6 90 83.3
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 7.3e-38 160.2 90 83.3
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 7.3e-38 160.2 90 82.2
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 9.5e-38 159.8 90 83.3
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-37 159.1 90 82.2
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.6e-37 159.1 90 82.2
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.6e-37 159.1 90 82.2
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.6e-37 159.1 90 83.3
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.6e-37 159.1 90 83.3
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 2.1e-37 158.7 90 83.3
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 3.6e-37 157.9 114 69.3
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 4.7e-37 157.5 90 81.1
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 4.7e-37 157.5 90 81.1
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 4.7e-37 157.5 90 81.1
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 4.7e-37 157.5 90 82.2
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 4.7e-37 157.5 90 77.8
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 6.2e-37 157.1 90 81.1
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-37 157.1 90 81.1
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-37 157.1 90 81.1
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-37 157.1 90 81.1
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 6.2e-37 157.1 90 82.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 6.2e-37 157.1 90 81.1
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.8e-36 153.7 90 78.9
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 2.0e-35 152.1 90 81.1
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 2.6e-35 151.8 90 78.9
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 3.4e-35 151.4 91 76.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.4e-35 151.0 105 71.4
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.3e-34 149.4 90 77.8
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 2.4e-33 145.2 72 93.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 5.4e-33 144.1 90 74.4
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 9.2e-33 143.3 90 73.3
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 2.7e-32 141.7 90 71.1
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 4.6e-32 141.0 74 85.1
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 8.6e-31 136.7 90 67.8
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 7.3e-30 133.7 69 85.5
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.4e-27 124.8 67 83.6
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.2e-26 122.1 90 62.2
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.2e-26 122.1 73 76.7
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.9e-26 121.7 90 63.3
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 7.8e-24 113.6 67 77.6
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 1.3e-23 112.8 89 59.6
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 1.2e-21 106.3 67 70.1
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 4.7e-21 104.4 75 64.0
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-17 91.7 51 76.5
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-10 69.3 45 73.3
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 8.7e-07 57.0 36 69.4
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 7.3e-06 53.9 59 40.7


User provided reference genes

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