Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 5.1e-193 677.6 339 100.0
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 1.4e-129 466.8 349 67.6
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 3.7e-127 458.8 351 67.8
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 6.6e-124 448.0 351 67.2
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 4.4e-120 435.3 343 65.9
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 3.7e-119 432.2 339 65.8
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 8.3e-119 431.0 346 65.9
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.3e-116 423.7 340 65.6
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 3.3e-115 419.1 339 64.3
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 9.5e-115 417.5 339 64.3
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.2e-114 417.2 340 64.1
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 8.1e-114 414.5 340 64.7
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 4.0e-113 412.1 344 64.5
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 5.8e-112 408.3 346 63.3
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 7.5e-112 407.9 374 59.6
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.3e-111 407.1 339 62.8
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 3.2e-110 402.5 339 64.3
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 3.9e-108 395.6 338 60.7
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.7e-95 353.6 340 57.6
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 3.0e-92 342.8 345 52.5
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 3.6e-90 335.9 344 54.4
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 8.1e-90 334.7 343 53.4
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 1.2e-88 330.9 333 53.8
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.5e-88 330.5 344 52.3
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.6e-88 329.7 365 52.9
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 2.2e-87 326.6 341 53.1
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 2.9e-87 326.2 345 51.6
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.6e-85 320.5 339 50.4
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 2.7e-85 319.7 339 49.9
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 7.9e-85 318.2 346 50.6
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 7.9e-85 318.2 347 51.0
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 3.9e-84 315.8 339 51.9
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 6.7e-84 315.1 352 49.4
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 6.7e-84 315.1 339 50.1
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 2.5e-83 313.2 356 50.6
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 2.5e-83 313.2 335 48.7
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 7.4e-83 311.6 344 49.1
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 9.6e-83 311.2 343 48.7
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.6e-82 310.5 338 49.4
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 1.6e-82 310.5 378 47.1
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 2.8e-82 309.7 338 52.1
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 3.7e-82 309.3 314 53.8
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 6.2e-82 308.5 260 60.8
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.1e-81 307.8 342 47.4
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.4e-81 307.4 343 50.7
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 2.4e-81 306.6 343 48.1
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 2.4e-81 306.6 343 48.1
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 3.1e-81 306.2 343 50.1
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 4.0e-81 305.8 346 48.3
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 6.9e-81 305.1 342 49.4
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.2e-80 304.3 342 49.4
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.0e-80 303.5 342 49.4
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 5.8e-80 302.0 350 50.9
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 3.8e-79 299.3 345 45.8
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 3.8e-79 299.3 352 50.0
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 4.9e-79 298.9 323 48.6
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.1e-78 297.7 336 48.8
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 3.2e-78 296.2 347 45.8
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 3.5e-77 292.7 347 46.4
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 2.3e-76 290.0 344 45.6
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 3.0e-76 289.7 351 48.4
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 3.9e-76 289.3 314 49.7
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 3.9e-76 289.3 316 49.4
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.9e-75 287.0 349 45.0
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 2.5e-75 286.6 313 50.2
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.3e-74 284.3 345 43.8
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 1.4e-73 280.8 353 48.2
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.8e-73 280.4 330 46.7
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 3.1e-73 279.6 357 44.3
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 5.3e-73 278.9 354 44.6
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 1.5e-72 277.3 362 44.8
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 1.5e-72 277.3 330 46.7
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 1.3e-71 274.2 318 45.6
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 1.7e-71 273.9 360 43.9
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 2.2e-71 273.5 348 43.7
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 2.2e-71 273.5 348 44.8
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 2.9e-71 273.1 333 44.4
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 3.8e-71 272.7 366 42.6
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 4.9e-71 272.3 331 46.2
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.4e-70 270.8 248 53.2
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 2.5e-70 270.0 331 45.9
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 3.2e-70 269.6 377 41.4
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 5.5e-70 268.9 378 42.3
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 7.1e-70 268.5 395 41.0
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.2e-69 267.7 210 64.3
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.6e-69 267.3 352 41.5
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 6.0e-69 265.4 355 46.5
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 8.7e-68 261.5 345 44.3
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 1.1e-67 261.2 300 45.7
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.5e-67 260.8 300 45.3
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.9e-67 260.4 361 45.2
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 4.3e-67 259.2 332 44.6
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 9.7e-67 258.1 345 42.9
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 2.2e-66 256.9 300 44.7
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 2.2e-66 256.9 348 42.8
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 6.3e-66 255.4 300 44.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.2e-64 251.1 333 42.0
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 2.6e-64 250.0 295 47.8
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 4.2e-62 242.7 263 49.4
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 7.9e-61 238.4 319 43.3
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 7.4e-59 231.9 217 51.6
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 1.6e-53 214.2 188 54.3
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 4.1e-49 199.5 179 54.7
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 5.0e-47 192.6 249 43.4
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 4.4e-43 179.5 242 38.0
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 4.5e-40 169.5 121 68.6
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 4.5e-40 169.5 291 37.8
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 4.2e-38 162.9 331 35.6
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.8e-36 157.5 348 32.5
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.2e-35 154.8 217 38.7
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.6e-35 153.7 216 37.0
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.6e-35 153.7 219 35.2
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 1.3e-34 151.4 116 66.4
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.8e-34 150.2 255 36.5
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.7e-34 149.8 224 37.1
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.3e-34 149.1 215 33.5
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.4e-33 147.9 214 36.4
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.0e-33 145.6 216 36.6
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.7e-32 143.7 199 37.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 4.5e-32 142.9 209 34.9
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 4.7e-29 132.9 234 32.9
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.2e-28 129.4 152 41.4
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 3.8e-23 113.2 181 34.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 8.3e-18 95.5 92 53.3
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 3.2e-17 93.6 129 41.1


User provided reference genes

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