Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 2.1e-73 278.9 133 100.0
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 2.6e-23 112.5 64 85.9
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 3.1e-21 105.5 67 77.6
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 7.0e-21 104.4 63 81.0
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 7.0e-21 104.4 63 81.0
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.2e-20 103.6 67 74.6
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 2.0e-20 102.8 63 77.8
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 2.0e-20 102.8 63 79.4
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 2.0e-20 102.8 66 75.8
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.0e-20 102.8 67 73.1
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 2.7e-20 102.4 68 70.6
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 2.7e-20 102.4 62 80.6
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 2.7e-20 102.4 62 79.0
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 4.5e-20 101.7 68 73.5
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 4.5e-20 101.7 68 72.1
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 5.9e-20 101.3 63 76.2
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 5.9e-20 101.3 60 81.7
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.0e-19 100.5 56 85.7
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.3e-19 100.1 65 75.4
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.3e-19 100.1 63 79.4
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.7e-19 99.8 73 65.8
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.7e-19 99.8 72 68.1
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 1.7e-19 99.8 72 68.1
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 2.3e-19 99.4 91 58.2
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 2.3e-19 99.4 91 58.2
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.3e-19 99.4 62 75.8
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.3e-19 99.4 62 75.8
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.3e-19 99.4 62 75.8
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.3e-19 99.4 62 75.8
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 2.9e-19 99.0 65 72.3
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 3.8e-19 98.6 65 75.4
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 5.0e-19 98.2 75 64.0
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 5.0e-19 98.2 66 71.2
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 5.0e-19 98.2 62 74.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 5.0e-19 98.2 58 79.3
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 6.6e-19 97.8 66 71.2
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.6e-19 97.8 92 56.5
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 8.6e-19 97.4 66 71.2
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.1e-18 97.1 62 74.2
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.1e-18 97.1 58 77.6
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.1e-18 97.1 108 50.9
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.1e-18 97.1 58 77.6
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.1e-18 97.1 58 77.6
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.1e-18 97.1 58 77.6
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 1.1e-18 97.1 58 77.6
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.5e-18 96.7 57 78.9
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 1.9e-18 96.3 58 75.9
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.9e-18 96.3 58 75.9
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.5e-18 95.9 63 71.4
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.5e-18 95.9 78 64.1
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.5e-18 95.9 63 71.4
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.5e-18 95.9 63 71.4
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 2.5e-18 95.9 63 71.4
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 3.3e-18 95.5 67 67.2
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 3.3e-18 95.5 58 77.6
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 3.3e-18 95.5 62 74.2
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 3.3e-18 95.5 66 69.7
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 4.2e-18 95.1 63 71.4
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 5.5e-18 94.7 56 78.6
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 5.5e-18 94.7 58 75.9
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 5.5e-18 94.7 58 75.9
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 7.2e-18 94.4 58 74.1
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 9.5e-18 94.0 58 75.9
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.6e-17 93.2 58 75.9
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.6e-17 93.2 68 63.2
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 2.1e-17 92.8 83 57.8
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 2.8e-17 92.4 94 55.3
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.8e-17 92.4 64 68.8
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.8e-17 92.4 64 68.8
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 2.8e-17 92.4 64 68.8
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 2.8e-17 92.4 58 72.4
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 3.6e-17 92.0 61 70.5
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 4.7e-17 91.7 58 74.1
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 4.7e-17 91.7 75 61.3
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 4.7e-17 91.7 61 72.1
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 4.7e-17 91.7 60 70.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.0e-17 90.9 82 56.1
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 4.0e-16 88.6 67 62.7
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 5.2e-16 88.2 62 67.7
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 8.9e-16 87.4 80 55.0
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 1.2e-15 87.0 64 62.5
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 1.5e-15 86.7 63 68.3
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.0e-15 86.3 63 68.3
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.0e-15 86.3 97 50.5
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.0e-15 86.3 97 50.5
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 2.6e-15 85.9 58 69.0
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.6e-15 85.9 63 68.3
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 2.6e-15 85.9 63 68.3
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 2.6e-15 85.9 63 68.3
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 3.4e-15 85.5 56 71.4
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 4.4e-15 85.1 63 65.1
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 9.8e-15 84.0 53 73.6
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 9.8e-15 84.0 63 65.1
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 9.2e-13 77.4 69 53.6
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 2.7e-12 75.9 53 64.2
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.3e-11 73.6 50 70.0
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 4.3e-10 68.6 113 43.4
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.6e-09 66.6 58 58.6
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.1e-09 66.2 52 57.7
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.0e-08 63.9 60 53.3
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 2.3e-08 62.8 58 51.7
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 4.0e-08 62.0 42 69.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.4e-07 58.9 57 52.6
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.4e-07 58.9 77 41.6


User provided reference genes

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