Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.4e-99 366.3 189 100.0
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 6.6e-73 277.7 197 76.1
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.4e-70 270.0 190 77.9
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.4e-70 270.0 190 75.8
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 6.8e-70 267.7 200 73.5
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 3.4e-69 265.4 193 76.2
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 4.4e-69 265.0 190 75.3
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 7.5e-69 264.2 195 74.9
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.6e-66 256.5 197 71.1
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 7.8e-66 254.2 195 71.3
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 3.0e-65 252.3 197 70.1
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 6.6e-65 251.1 193 72.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.9e-64 249.6 197 69.0
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.8e-63 245.7 197 70.6
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 3.6e-63 245.4 190 68.9
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 4.7e-63 245.0 196 70.4
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 6.2e-63 244.6 196 69.9
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.1e-62 243.8 193 68.4
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 1.1e-62 243.8 193 69.4
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.8e-62 243.0 161 76.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 2.3e-62 242.7 194 70.1
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 2.3e-62 242.7 192 66.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 8.9e-62 240.7 192 69.8
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.5e-61 240.0 186 70.4
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 2.0e-61 239.6 172 75.6
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 2.6e-61 239.2 197 68.0
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 3.4e-61 238.8 192 69.3
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 4.4e-61 238.4 177 72.3
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 4.4e-61 238.4 192 68.8
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 5.8e-61 238.0 197 68.0
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.8e-61 238.0 172 73.8
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.3e-60 236.9 149 81.9
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 1.3e-60 236.9 192 68.8
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 1.7e-60 236.5 191 66.5
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 8.3e-60 234.2 195 68.2
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 1.1e-59 233.8 172 70.3
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.4e-59 233.4 188 69.7
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.9e-59 233.0 192 65.6
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.4e-59 232.6 172 69.8
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-59 232.3 189 66.1
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.2e-59 232.3 189 66.1
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.4e-59 231.5 172 69.2
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 5.4e-59 231.5 172 69.2
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 9.2e-59 230.7 196 66.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 2.1e-58 229.6 197 66.5
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 2.1e-58 229.6 186 67.7
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 6.0e-58 228.0 141 82.3
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 6.0e-58 228.0 148 79.1
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 6.0e-58 228.0 169 73.4
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 6.0e-58 228.0 171 70.8
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 1.3e-57 226.9 196 65.8
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.7e-57 226.5 194 67.0
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.7e-57 226.5 195 65.6
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.7e-57 226.5 148 81.1
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 2.3e-57 226.1 172 70.9
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 3.9e-57 225.3 174 71.3
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 6.6e-57 224.6 177 70.1
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 6.6e-57 224.6 187 66.8
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 8.6e-57 224.2 172 72.7
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 8.6e-57 224.2 170 72.9
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 1.5e-56 223.4 168 72.0
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.9e-56 223.0 173 69.4
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.9e-56 223.0 192 64.1
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 5.6e-56 221.5 181 69.1
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 7.3e-56 221.1 180 68.3
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.2e-55 220.3 189 66.7
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.6e-55 219.9 171 71.9
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.8e-55 219.2 176 67.6
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 3.6e-55 218.8 194 65.5
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 4.7e-55 218.4 157 74.5
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 6.2e-55 218.0 182 67.6
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.1e-54 217.2 157 73.9
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.1e-54 217.2 178 67.4
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 1.8e-54 216.5 198 64.1
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.8e-54 216.5 176 69.3
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.8e-54 216.5 157 73.9
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 4.0e-54 215.3 141 78.7
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 4.0e-54 215.3 172 67.4
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 4.0e-54 215.3 161 72.7
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 4.0e-54 215.3 142 78.2
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 5.2e-54 214.9 188 64.4
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 5.2e-54 214.9 181 65.2
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 5.2e-54 214.9 176 68.8
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 6.8e-54 214.5 136 80.9
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 8.9e-54 214.2 145 77.2
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 8.9e-54 214.2 168 70.2
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 8.9e-54 214.2 157 73.2
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 8.9e-54 214.2 180 65.6
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.2e-53 213.8 146 76.7
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.5e-53 213.4 139 80.6
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.5e-53 213.4 142 78.2
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.6e-53 212.6 188 65.4
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.6e-53 212.6 196 62.8
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.4e-53 212.2 145 77.2
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 3.4e-53 212.2 138 79.7
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 4.4e-53 211.8 139 80.6
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 4.4e-53 211.8 175 66.3
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 5.8e-53 211.5 139 79.9
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 7.5e-53 211.1 142 78.9
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 7.5e-53 211.1 142 78.9
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 7.5e-53 211.1 142 78.9
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 7.5e-53 211.1 188 64.9
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 9.9e-53 210.7 145 77.9
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 9.9e-53 210.7 171 67.3
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.7e-52 209.9 188 64.9
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 2.2e-52 209.5 141 80.1
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 2.2e-52 209.5 195 62.1
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.9e-52 209.1 198 62.6
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.9e-52 208.4 187 64.7
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.4e-51 206.8 183 64.5
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.4e-51 206.8 153 71.2
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.9e-51 206.5 162 70.4
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 1.9e-51 206.5 140 80.0
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 1.9e-51 206.5 195 63.6
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 3.2e-51 205.7 174 67.2
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.2e-50 203.8 133 81.2
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.6e-50 203.4 145 75.9
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 2.1e-50 203.0 172 68.6
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 2.7e-50 202.6 116 87.1
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 2.7e-50 202.6 145 75.2
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.6e-50 201.8 183 63.9
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 6.0e-50 201.4 142 76.8
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 6.0e-50 201.4 165 66.7
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 1.5e-48 196.8 111 89.2
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.9e-48 196.4 180 63.3
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 7.3e-48 194.5 113 87.6
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 2.1e-47 193.0 192 57.3
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.8e-47 192.6 114 85.1
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.8e-47 192.6 114 85.1
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 3.6e-47 192.2 113 86.7
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 6.2e-47 191.4 143 70.6
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 8.1e-47 191.0 138 75.4
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 2.4e-46 189.5 175 62.9
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.4e-45 185.3 209 53.6
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 7.6e-45 184.5 188 59.0
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 9.9e-45 184.1 139 70.5
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.7e-44 183.3 188 58.5
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 3.8e-44 182.2 183 55.2
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.2e-42 177.2 193 57.0
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.6e-42 176.8 107 86.9
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.6e-41 171.4 139 66.2
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 6.6e-41 171.4 108 78.7
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.3e-40 169.1 182 58.8
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 7.3e-40 167.9 139 64.7
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 9.6e-40 167.5 167 59.9
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-39 167.2 185 50.3
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.6e-39 166.8 185 54.1
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.6e-39 166.8 188 55.9
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 4.0e-38 162.2 153 60.1
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 5.8e-37 158.3 113 70.8
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 5.8e-37 158.3 158 59.5
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 7.6e-37 157.9 112 69.6
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 4.2e-35 152.1 152 55.9
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 6.6e-33 144.8 334 34.4
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.8e-31 138.7 129 61.2
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 4.2e-27 125.6 105 61.0
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.8e-25 120.2 81 77.8
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 2.3e-25 119.8 125 52.0
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 8.7e-25 117.9 121 55.4
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.1e-23 113.2 91 69.2
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-22 110.9 85 70.6
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.4e-22 110.5 91 67.0
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 4.0e-22 109.0 86 72.1
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.6e-21 106.3 86 70.9
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.6e-21 106.3 86 70.9
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 4.3e-16 89.0 94 53.2
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 2.0e-13 80.1 44 90.9
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 4.5e-13 79.0 49 81.6
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 7.6e-13 78.2 72 59.7
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.7e-12 77.0 63 61.9
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 3.5e-10 69.3 39 87.2
Psat5g263840 Pisum sativum HOM05D001198 ORTHO05D001599 7.4e-08 61.6 147 32.0
Lalb_Chr12g0198741 Lupinus albus HOM05D004106 ORTHO05D004381 8.2e-07 58.2 56 51.8
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.1e-06 57.8 137 35.0
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 5.3e-06 55.5 133 36.1
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 6.9e-06 55.1 148 34.5
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 6.9e-06 55.1 112 40.2
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 6.9e-06 55.1 148 34.5


User provided reference genes

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