Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 5.1e-229 797.3 393 100.0
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.0e-200 703.4 396 87.4
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.5e-199 698.7 397 86.4
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 8.8e-197 690.3 396 84.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 5.7e-196 687.6 396 85.4
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 7.5e-196 687.2 397 85.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 9.8e-196 686.8 396 85.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 7.0e-194 680.6 398 84.7
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 5.0e-192 674.5 398 84.7
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 4.7e-190 667.9 396 83.1
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.8e-189 666.0 398 83.2
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 4.1e-186 654.8 401 82.0
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 5.6e-183 644.4 385 81.3
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.6e-182 642.9 389 80.5
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.6e-182 642.9 388 82.2
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 7.8e-177 624.0 385 79.5
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 6.6e-176 620.9 385 79.7
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.9e-175 619.4 400 77.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.9e-175 619.4 346 87.6
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.2e-174 616.7 394 77.9
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 3.1e-173 612.1 392 78.6
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 5.2e-173 611.3 395 77.7
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 8.9e-173 610.5 395 77.7
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 3.7e-171 605.1 385 79.7
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.9e-171 604.7 410 73.7
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 4.9e-171 604.7 396 75.8
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 4.9e-171 604.7 389 77.9
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 2.4e-170 602.4 389 77.4
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 3.2e-170 602.1 383 77.8
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 4.1e-170 601.7 396 76.0
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 5.4e-170 601.3 386 76.2
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 4.6e-169 598.2 387 77.8
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.0e-168 597.0 393 76.8
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 6.6e-168 594.3 393 76.8
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 6.6e-168 594.3 388 76.0
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 8.6e-168 594.0 388 75.8
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.9e-167 592.8 386 77.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.3e-167 591.7 386 77.2
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.1e-166 589.3 385 75.6
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.8e-166 589.0 384 76.8
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 4.7e-166 588.2 393 74.6
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.1e-165 587.0 393 74.3
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.4e-165 586.6 396 72.5
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.3e-165 585.9 384 75.3
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 3.1e-165 585.5 398 75.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 4.0e-165 585.1 397 74.8
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 4.0e-165 585.1 389 76.6
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 5.2e-165 584.7 380 76.3
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 5.2e-165 584.7 374 79.9
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.2e-165 584.7 383 74.9
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 3.4e-164 582.0 387 76.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.4e-164 581.6 390 72.8
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.7e-163 579.7 386 75.6
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.7e-163 579.7 384 75.3
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 3.7e-163 578.6 390 72.8
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.7e-163 578.6 384 75.3
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.9e-162 576.2 356 78.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.4e-162 575.9 389 73.0
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.4e-162 575.9 441 68.3
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 2.4e-162 575.9 386 74.9
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 4.1e-162 575.1 396 75.3
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 9.2e-162 573.9 380 74.7
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.1e-161 572.8 393 72.8
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.7e-161 572.4 392 72.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.3e-160 570.1 385 73.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 3.0e-160 568.9 394 73.4
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 3.9e-160 568.5 345 77.7
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.1e-159 567.0 339 82.9
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.5e-159 565.8 339 82.6
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.5e-159 565.8 339 82.6
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.5e-159 565.8 339 82.9
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 5.6e-159 564.7 360 75.8
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 5.6e-159 564.7 420 69.8
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.6e-158 563.1 359 75.2
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 6.2e-158 561.2 343 77.3
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 1.4e-157 560.1 366 75.1
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.8e-157 559.7 359 75.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.3e-157 559.3 429 65.7
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.0e-157 558.5 393 72.0
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 5.2e-157 558.1 345 77.4
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 5.2e-157 558.1 345 77.4
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.6e-156 555.8 390 72.1
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 4.4e-156 555.1 345 76.8
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 5.8e-156 554.7 393 72.8
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 7.6e-156 554.3 345 76.5
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 7.6e-156 554.3 345 76.5
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 7.6e-156 554.3 388 70.6
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 9.9e-156 553.9 385 71.2
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 9.9e-156 553.9 331 79.2
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 9.2e-154 547.4 324 82.1
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 9.2e-154 547.4 388 70.1
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.7e-152 543.1 333 77.5
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 6.6e-152 541.2 330 77.6
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.6e-151 538.1 369 74.5
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.4e-149 532.7 299 87.0
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.4e-148 528.5 397 69.5
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.8e-147 525.4 391 71.1
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 8.7e-144 514.2 387 67.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.5e-143 512.7 396 67.4
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 4.3e-143 511.9 336 76.2
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 9.6e-143 510.8 380 68.7
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.3e-141 505.0 425 64.0
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.0e-136 490.7 381 66.4
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.2e-131 473.0 329 67.5
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 6.7e-128 461.5 339 66.4
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.9e-127 459.9 327 67.6
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.5e-123 444.9 306 73.9
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.5e-122 443.0 329 64.7
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 2.5e-114 416.4 317 67.8
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 4.6e-113 412.1 290 70.3
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.3e-112 410.6 274 76.3
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 8.0e-89 331.6 296 55.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.2e-84 317.8 302 52.3
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 7.7e-84 315.1 303 51.2
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 8.5e-83 311.6 304 57.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 5.9e-76 288.9 244 60.7
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.3e-72 276.9 181 76.8
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.4e-53 212.6 177 62.1
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.0e-53 212.2 130 74.6
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.5e-42 177.9 113 77.9
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.8e-33 147.1 102 68.6
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 4.3e-26 123.2 124 53.2
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 6.2e-25 119.4 107 56.1
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.2e-21 106.7 74 71.6
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-19 101.3 162 38.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 6.7e-19 99.4 106 49.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.3e-17 95.1 52 80.8


User provided reference genes

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