Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0022916 Lotus japonicus HOM05D007728 ORTHO05D009681 0.0e+00 1134.0 561 100.0
Lj6g0011981 Lotus japonicus HOM05D007728 ORTHO05D009681 6.0e-231 804.3 588 69.9
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 5.3e-54 216.5 377 36.3
Lj5g0007568 Lotus japonicus HOM05D007728 ORTHO05D009681 2.8e-47 194.1 319 33.9
Lj2g0007737 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-44 185.3 343 32.1
Medtr6g471840 Medicago truncatula HOM05D007728 ORTHO05D009681 8.5e-44 182.6 400 32.5
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-43 182.2 278 33.8
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 3.2e-43 180.6 282 36.5
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 4.2e-43 180.3 300 34.0
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 4.7e-42 176.8 213 41.3
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 4.7e-42 176.8 213 41.3
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-41 174.9 334 32.0
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 5.2e-41 173.3 213 40.8
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 6.3e-39 166.4 273 30.4
Medtr5g023720 Medicago truncatula HOM05D007728 ORTHO05D009681 8.3e-39 166.0 317 30.3
Lj1g0018604 Lotus japonicus HOM05D007728 ORTHO05D009681 5.9e-37 159.8 343 30.0
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-36 158.3 427 29.3
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 5.0e-36 156.8 298 30.5
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 6.5e-36 156.4 281 31.3
LjContig00357g0010761 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-35 155.6 410 28.3
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 3.6e-34 150.6 298 29.5
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 6.1e-34 149.8 329 27.1
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 6.1e-34 149.8 329 27.1
Lj4g0022567 Lotus japonicus HOM05D007728 ORTHO05D009681 1.0e-33 149.1 179 42.5
Lj4g0018110 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-33 147.9 291 33.0
Lj3g0002464 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-32 145.2 255 32.5
Lj1g0027147 Lotus japonicus HOM05D007728 ORTHO05D009681 2.0e-32 144.8 410 28.0
Lj6g0019939 Lotus japonicus HOM05D007728 ORTHO05D009681 9.8e-32 142.5 269 33.1
Lj3g0004344 Lotus japonicus HOM05D007728 ORTHO05D009681 2.8e-31 141.0 520 27.1
Lj3g0005611 Lotus japonicus HOM05D007728 ORTHO05D009681 2.8e-31 141.0 506 26.5
Lj4g0027426 Lotus japonicus HOM05D007728 ORTHO05D009681 3.1e-30 137.5 313 27.5
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 3.5e-29 134.0 229 30.6
arahy.Tifrunner.gnm1.ann1.K8WX4Q Arachis hypogaea HOM05D014551 ORTHO05D009681 2.3e-28 131.3 249 32.1
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 2.9e-28 131.0 255 31.0
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 5.0e-28 130.2 175 38.9
arahy.Tifrunner.gnm1.ann1.CYJA9T Arachis hypogaea HOM05D007728 ORTHO05D009681 1.5e-27 128.6 265 30.2
Lj6g0001515 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-27 128.6 310 31.0
Lj3g0006822 Lotus japonicus HOM05D040744 ORTHO05D009681 7.3e-27 126.3 336 27.1
Lj1g0001720 Lotus japonicus HOM05D007728 ORTHO05D009681 9.5e-27 125.9 299 28.8
arahy.Tifrunner.gnm1.ann1.NMLT85 Arachis hypogaea HOM05D007728 ORTHO05D021507 1.2e-24 119.0 260 27.7
Lj1g0007911 Lotus japonicus HOM05D007728 ORTHO05D009681 1.2e-24 119.0 206 31.6
arahy.Tifrunner.gnm1.ann1.F1MI29 Arachis hypogaea HOM05D008607 ORTHO05D010784 1.5e-24 118.6 312 27.9
arahy.Tifrunner.gnm1.ann1.FLR77E Arachis hypogaea HOM05D007728 ORTHO05D021507 5.8e-24 116.7 278 27.3
Lj5g0026008 Lotus japonicus HOM05D016573 ORTHO05D009681 9.8e-24 115.9 219 31.5
Lj2g0021840 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-23 115.5 274 25.5
Lj1g0024522 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-23 115.2 185 30.3
Lj4g0015611 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-23 114.0 155 34.8
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 3.7e-23 114.0 162 32.1
arahy.Tifrunner.gnm1.ann1.26YFK1 Arachis hypogaea HOM05D007728 ORTHO05D021507 6.4e-23 113.2 260 26.9
arahy.Tifrunner.gnm1.ann1.63191C Arachis hypogaea HOM05D014551 ORTHO05D009681 6.4e-23 113.2 240 29.6
Lj5g0019189 Lotus japonicus HOM05D007728 ORTHO05D009681 3.2e-22 110.9 210 32.9
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 3.5e-21 107.5 311 26.7
Lj4g0011622 Lotus japonicus HOM05D016573 ORTHO05D009681 4.6e-21 107.1 260 28.1
Lj2g0011761 Lotus japonicus HOM05D007728 ORTHO05D009681 6.6e-20 103.2 290 24.5
Lj5g0016739 Lotus japonicus HOM05D024850 ORTHO05D025768 6.6e-20 103.2 324 26.9
Medtr6g061910 Medicago truncatula HOM05D035021 ORTHO05D022933 1.1e-19 102.4 344 24.7
TPR.G37581 Trifolium pratense HOM05D007728 ORTHO05D009681 1.5e-19 102.1 263 24.3
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 4.3e-19 100.5 265 27.9
Medtr0268s0040 Medicago truncatula HOM05D035021 ORTHO05D022933 4.3e-19 100.5 334 25.7
arahy.Tifrunner.gnm1.ann1.MRZ5LS Arachis hypogaea HOM05D007728 ORTHO05D009681 5.6e-19 100.1 227 29.5
Lj1g0003216 Lotus japonicus HOM05D007728 ORTHO05D009681 7.3e-19 99.8 302 26.2
arahy.Tifrunner.gnm1.ann1.E3DKLZ Arachis hypogaea HOM05D009036 ORTHO05D011872 2.8e-18 97.8 281 26.0
arahy.Tifrunner.gnm1.ann1.LCEB5E Arachis hypogaea HOM05D009036 ORTHO05D011872 4.7e-18 97.1 348 25.0
Lj5g0000777 Lotus japonicus HOM05D024850 ORTHO05D025768 6.2e-18 96.7 264 26.9
arahy.Tifrunner.gnm1.ann1.AR083C Arachis hypogaea HOM05D038934 ORTHO05D021507 1.4e-17 95.5 241 27.8
arahy.Tifrunner.gnm1.ann1.2QX347 Arachis hypogaea HOM05D009036 ORTHO05D011872 3.1e-17 94.4 270 25.2
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-17 94.0 174 29.9
arahy.Tifrunner.gnm1.ann1.6QZ6Z8 Arachis hypogaea HOM05D014551 ORTHO05D009681 6.8e-17 93.2 305 26.2
Medtr5g054010 Medicago truncatula HOM05D035021 ORTHO05D022933 6.8e-17 93.2 326 24.5
arahy.Tifrunner.gnm1.ann1.7H371A Arachis hypogaea HOM05D009036 ORTHO05D011872 4.4e-16 90.5 274 24.1
Lj4g0023855 Lotus japonicus HOM05D007728 ORTHO05D009681 2.9e-15 87.8 172 31.4
arahy.Tifrunner.gnm1.ann1.UYMN7S Arachis hypogaea HOM05D008607 ORTHO05D010784 3.7e-15 87.4 312 25.0
arahy.Tifrunner.gnm1.ann1.9R8PUV Arachis hypogaea HOM05D008607 ORTHO05D010784 4.9e-15 87.0 312 26.0
Lj3g0012082 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-14 85.9 274 25.2
arahy.Tifrunner.gnm1.ann1.D9VETH Arachis hypogaea HOM05D008607 ORTHO05D010784 1.9e-14 85.1 328 24.4
arahy.Tifrunner.gnm1.ann1.LVQ59A Arachis hypogaea HOM05D008607 ORTHO05D010784 1.9e-14 85.1 212 28.3
arahy.Tifrunner.gnm1.ann1.IPN40Q Arachis hypogaea HOM05D008607 ORTHO05D010784 2.4e-14 84.7 257 26.5
TPR.G39856 Trifolium pratense HOM05D007728 ORTHO05D025857 3.2e-14 84.3 198 27.3
arahy.Tifrunner.gnm1.ann1.8HM2EW Arachis hypogaea HOM05D008607 ORTHO05D010784 9.2e-14 82.8 273 26.7
arahy.Tifrunner.gnm1.ann1.WZZH7X Arachis hypogaea HOM05D008607 ORTHO05D010784 9.2e-14 82.8 273 26.7
Lj1g0024226 Lotus japonicus HOM05D007728 ORTHO05D036499 9.2e-14 82.8 69 55.1
Lj5g0015834 Lotus japonicus HOM05D007728 ORTHO05D036499 9.2e-14 82.8 69 55.1
Medtr6g045620 Medicago truncatula HOM05D007728 ORTHO05D010784 1.6e-13 82.0 255 28.6
Lj1g0022308 Lotus japonicus HOM05D024850 ORTHO05D025768 6.0e-13 80.1 151 30.5
arahy.Tifrunner.gnm1.ann1.RT05UY Arachis hypogaea HOM05D009036 ORTHO05D011872 1.7e-12 78.6 263 23.6
arahy.Tifrunner.gnm1.ann1.S3PUKV Arachis hypogaea HOM05D009036 ORTHO05D011872 2.3e-12 78.2 261 22.6
arahy.Tifrunner.gnm1.ann1.D6JZRQ Arachis hypogaea HOM05D008645 ORTHO05D007788 3.0e-12 77.8 249 24.1
arahy.Tifrunner.gnm1.ann1.DQEM0F Arachis hypogaea HOM05D009036 ORTHO05D011872 3.0e-12 77.8 264 24.2
arahy.Tifrunner.gnm1.ann1.IRL4YX Arachis hypogaea HOM05D008645 ORTHO05D007788 3.3e-11 74.3 263 23.6
arahy.Tifrunner.gnm1.ann1.6ZP1HE Arachis hypogaea HOM05D007728 ORTHO05D021507 4.3e-11 73.9 170 29.4
arahy.Tifrunner.gnm1.ann1.M4BVAC Arachis hypogaea HOM05D057451 ORTHO05D009681 4.3e-11 73.9 219 25.6
arahy.Tifrunner.gnm1.ann1.CQ2DU1 Arachis hypogaea HOM05D008607 ORTHO05D010784 5.6e-11 73.6 253 29.6
Lj1g0023634 Lotus japonicus HOM05D007728 ORTHO05D009681 5.6e-11 73.6 529 21.7
arahy.Tifrunner.gnm1.ann1.4TSV6W Arachis hypogaea HOM05D008645 ORTHO05D007788 2.8e-10 71.2 270 23.7
arahy.Tifrunner.gnm1.ann1.AL9EYS Arachis hypogaea HOM05D008645 ORTHO05D007788 2.8e-10 71.2 270 23.7
arahy.Tifrunner.gnm1.ann1.GI9T10 Arachis hypogaea HOM05D008645 ORTHO05D007788 2.8e-10 71.2 270 23.7
Lj5g0002603 Lotus japonicus HOM05D016573 ORTHO05D236871 2.8e-10 71.2 94 31.9
arahy.Tifrunner.gnm1.ann1.K1ZRFD Arachis hypogaea HOM05D009036 ORTHO05D011872 3.6e-10 70.9 148 28.4
TPR.G35664 Trifolium pratense HOM05D007728 ORTHO05D025857 3.6e-10 70.9 136 29.4
Lj6g0005096 Lotus japonicus HOM05D016573 ORTHO05D009681 4.7e-10 70.5 181 28.7
Lj1g0000596 Lotus japonicus HOM05D007728 ORTHO05D009681 6.2e-10 70.1 60 43.3
arahy.Tifrunner.gnm1.ann1.M7A2ZD Arachis hypogaea HOM05D038934 ORTHO05D021507 1.1e-09 69.3 236 22.9
arahy.Tifrunner.gnm1.ann1.N9YQYJ Arachis hypogaea HOM05D008645 ORTHO05D007788 1.1e-09 69.3 152 27.6
Lj1g0002377 Lotus japonicus HOM05D024850 ORTHO05D025768 1.1e-09 69.3 157 28.7
Lj4g0005981 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-09 68.2 106 34.0
Lj4g0012974 Lotus japonicus HOM05D007728 ORTHO05D009681 5.2e-09 67.0 72 41.7
arahy.Tifrunner.gnm1.ann1.RA57MB Arachis hypogaea HOM05D008645 ORTHO05D007788 6.8e-09 66.6 278 22.3
arahy.Tifrunner.gnm1.ann1.IZD333 Arachis hypogaea HOM05D008645 ORTHO05D007788 8.9e-09 66.2 259 25.1
arahy.Tifrunner.gnm1.ann1.P8R7I9 Arachis hypogaea HOM05D009036 ORTHO05D011872 1.2e-08 65.9 234 23.5
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 1.2e-08 65.9 282 23.4
arahy.Tifrunner.gnm1.ann1.TSP5BT Arachis hypogaea HOM05D009036 ORTHO05D011872 1.5e-08 65.5 234 23.5
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 1.5e-08 65.5 282 23.4
arahy.Tifrunner.gnm1.ann1.E81N8H Arachis hypogaea HOM05D009036 ORTHO05D011872 2.0e-08 65.1 283 24.0
TPR.G119 Trifolium pratense HOM05D007728 ORTHO05D036499 2.0e-08 65.1 59 49.2
TPR.G27876 Trifolium pratense HOM05D061328 ORTHO05D022933 4.4e-08 63.9 174 29.3
QL10p051876 Quercus lobata HOM05D022192 ORTHO05D009908 5.8e-08 63.5 137 26.3
arahy.Tifrunner.gnm1.ann1.2N7Z0C Arachis hypogaea HOM05D008645 ORTHO05D007788 1.3e-07 62.4 246 24.0
arahy.Tifrunner.gnm1.ann1.PRU9CS Arachis hypogaea HOM05D009036 ORTHO05D011872 2.9e-07 61.2 234 25.2
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 2.9e-07 61.2 273 21.2
arahy.Tifrunner.gnm1.ann1.G9AWLG Arachis hypogaea HOM05D008607 ORTHO05D010784 3.7e-07 60.8 153 28.1
arahy.Tifrunner.gnm1.ann1.M3GBHV Arachis hypogaea HOM05D009036 ORTHO05D011872 3.7e-07 60.8 145 24.1
Lj5g0007878 Lotus japonicus HOM05D024850 ORTHO05D025768 6.4e-07 60.1 128 32.8
arahy.Tifrunner.gnm1.ann1.7CZB22 Arachis hypogaea HOM05D009036 ORTHO05D011872 8.3e-07 59.7 164 23.2
Lj5g0003789 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-06 59.3 267 22.5
arahy.Tifrunner.gnm1.ann1.3VIF24 Arachis hypogaea HOM05D009036 ORTHO05D011872 1.4e-06 58.9 264 23.1
arahy.Tifrunner.gnm1.ann1.TLC2KB Arachis hypogaea HOM05D009036 ORTHO05D011872 2.4e-06 58.2 163 26.4
Lj5g0022558 Lotus japonicus HOM05D036966 ORTHO05D236660 2.4e-06 58.2 76 34.2
Lj1g0006672 Lotus japonicus HOM05D007728 ORTHO05D009681 3.2e-06 57.8 246 23.2
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 3.2e-06 57.8 142 26.8
Lalb_Chr06g0171961 Lupinus albus HOM05D007728 ORTHO05D009681 9.2e-06 56.2 125 32.8


User provided reference genes

Program Settings