Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.1e-83 312.4 164 100.0
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 1.2e-51 206.8 162 71.0
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 4.9e-48 194.9 162 64.8
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 5.0e-45 184.9 162 64.2
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 4.4e-41 171.8 162 61.7
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 8.3e-40 167.5 167 58.7
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 8.3e-40 167.5 167 57.5
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 4.1e-39 165.2 167 58.1
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.6e-38 163.3 167 58.1
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 6.0e-38 161.4 167 57.5
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 7.8e-38 161.0 167 57.5
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.7e-37 159.8 167 56.3
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 2.3e-37 159.5 167 55.7
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 5.0e-37 158.3 173 59.0
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 5.0e-37 158.3 173 59.0
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 8.6e-37 157.5 168 58.9
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 8.6e-37 157.5 168 58.9
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 1.9e-36 156.4 177 58.2
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 3.3e-36 155.6 167 57.5
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 3.3e-36 155.6 176 54.5
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 4.3e-36 155.2 165 56.4
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 4.3e-36 155.2 167 57.5
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 1.6e-35 153.3 167 56.9
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 8.0e-35 151.0 167 58.1
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 3.1e-34 149.1 163 54.6
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 4.0e-34 148.7 168 54.8
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 4.0e-34 148.7 174 55.2
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 8.9e-34 147.5 165 55.2
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.5e-33 146.7 167 55.1
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 2.6e-33 146.0 170 54.7
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 3.4e-33 145.6 167 53.9
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.2e-32 142.9 168 54.2
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.7e-32 142.1 166 54.2
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.4e-32 141.4 168 51.8
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.4e-31 140.2 168 53.0
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 4.1e-31 138.7 167 52.1
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 5.4e-31 138.3 167 50.9
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 7.0e-31 137.9 164 52.4
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.0e-31 137.9 166 51.2
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 9.2e-31 137.5 167 50.3
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.2e-30 137.1 170 53.5
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.6e-30 136.7 165 49.1
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.7e-30 136.0 165 49.1
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 4.6e-30 135.2 167 50.3
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 6.0e-30 134.8 169 53.8
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.8e-30 134.4 166 52.4
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.0e-29 134.0 164 50.6
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.3e-29 133.7 168 52.4
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.3e-29 133.7 168 52.4
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.3e-29 133.7 168 52.4
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.0e-29 132.5 168 52.4
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.0e-29 132.5 166 49.4
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.0e-29 132.5 166 49.4
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.0e-29 132.5 167 49.7
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 6.6e-29 131.3 170 50.0
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 8.6e-29 131.0 167 49.1
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 8.6e-29 131.0 167 49.7
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 8.6e-29 131.0 167 50.3
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 2.5e-28 129.4 166 51.2
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.5e-28 129.4 169 52.7
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 2.5e-28 129.4 163 52.1
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 2.1e-27 126.3 165 45.5
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 2.8e-27 125.9 176 47.2
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 4.0e-26 122.1 167 46.1
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 4.4e-25 118.6 168 44.0
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.7e-24 116.7 167 46.1
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.2e-24 116.3 168 47.6
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.7e-24 115.5 168 44.6
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 6.4e-24 114.8 167 45.5
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 8.3e-24 114.4 166 45.8
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 8.3e-24 114.4 167 45.5
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 167 46.1
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.4e-23 112.8 164 45.1
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.2e-23 112.5 167 45.5
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.2e-22 110.5 171 43.3
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.6e-22 110.2 159 42.1
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.1e-22 109.8 167 44.9
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 2.1e-22 109.8 165 44.2
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 6.0e-22 108.2 166 42.8
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 1.3e-21 107.1 166 39.8
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 3.9e-21 105.5 168 44.0
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 5.1e-21 105.1 165 42.4
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 5.1e-21 105.1 167 41.3
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 6.6e-21 104.8 165 43.6
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 8.6e-21 104.4 167 44.9
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.1e-20 104.0 167 41.3
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 2.5e-20 102.8 166 39.8
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 3.3e-20 102.4 168 38.1
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 5.6e-20 101.7 207 36.2
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.6e-19 100.1 207 36.2
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.8e-19 99.4 166 41.0
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 4.7e-19 98.6 167 43.1
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 1.4e-18 97.1 165 43.0
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.8e-18 96.7 128 52.3
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.8e-18 96.7 166 38.6
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.8e-18 96.7 167 42.5
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 4.0e-18 95.5 184 34.2
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 4.0e-18 95.5 184 34.2
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 4.0e-18 95.5 184 34.2
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 4.0e-18 95.5 184 34.8
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 5.2e-18 95.1 168 38.7
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 1.2e-17 94.0 169 37.9
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 7.6e-17 91.3 173 40.5
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 7.6e-17 91.3 203 38.9
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 9.9e-17 90.9 184 34.2
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 9.9e-17 90.9 164 37.8
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.3e-16 90.5 164 41.5
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.7e-16 90.1 214 31.8
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.7e-16 90.1 165 39.4
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 3.8e-16 89.0 187 33.2
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.9e-16 88.6 177 37.3
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 3.2e-15 85.9 153 39.9
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 4.2e-15 85.5 186 32.8
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 3.5e-14 82.4 190 31.6
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 3.5e-14 82.4 171 37.4
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 6.0e-14 81.6 152 36.2
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.3e-13 80.5 155 34.8
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 3.0e-13 79.3 148 41.2
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 5.1e-13 78.6 184 30.4
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 4.3e-12 75.5 151 40.4
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.3e-12 74.7 162 33.3
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 9.6e-12 74.3 163 37.4
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.2e-11 73.9 167 37.7
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.6e-11 73.6 164 32.9
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 2.8e-11 72.8 153 32.7
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 2.4e-10 69.7 138 44.9
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.5e-09 67.0 164 36.0
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 4.4e-09 65.5 183 33.3
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 6.4e-08 61.6 161 33.5
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 2.4e-07 59.7 120 33.3
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.2e-07 58.9 160 33.1
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 7.1e-07 58.2 160 31.9
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 7.1e-07 58.2 166 33.7
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 4.6e-06 55.5 65 44.6


User provided reference genes

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