Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 6.5e-138 494.2 277 100.0
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.7e-82 310.1 284 64.1
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 3.0e-82 309.3 284 64.1
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.5e-78 297.0 285 63.5
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 3.8e-77 292.4 279 61.3
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 4.2e-76 288.9 279 60.6
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 4.3e-73 278.9 272 62.1
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.6e-73 278.5 283 58.3
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 4.0e-71 272.3 284 57.0
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 6.5e-69 265.0 272 59.6
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.3e-65 252.7 273 57.5
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.2e-62 244.2 299 52.5
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 4.8e-56 222.2 303 49.2
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.5e-54 217.2 241 56.8
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.5e-54 217.2 286 51.4
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.0e-50 203.0 286 51.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 8.2e-48 194.9 260 49.6
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 9.1e-47 191.4 313 46.3
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 3.4e-46 189.5 271 51.7
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 5.9e-46 188.7 303 44.6
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.8e-45 186.0 279 45.9
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 9.4e-44 181.4 302 44.7
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.7e-43 179.9 273 50.9
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.7e-43 179.9 273 50.9
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 4.7e-43 179.1 278 46.0
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.1e-41 174.5 274 46.7
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.6e-41 173.3 264 50.0
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 4.4e-41 172.6 274 45.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 4.4e-41 172.6 274 45.3
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.7e-41 172.2 264 50.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.8e-40 169.1 270 45.9
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 4.1e-39 166.0 266 44.0
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.6e-38 163.3 241 46.5
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 3.5e-38 162.9 263 46.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.5e-38 162.9 254 50.0
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 5.9e-38 162.2 238 48.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 7.7e-38 161.8 252 47.2
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 8.5e-37 158.3 286 42.3
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 1.1e-36 157.9 241 49.0
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 6.7e-34 148.7 242 42.1
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.2e-33 147.9 278 39.6
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.2e-32 143.7 231 48.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 4.8e-32 142.5 263 43.3
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 8.2e-32 141.7 278 42.1
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 8.2e-32 141.7 238 47.9
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.8e-31 140.6 272 43.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.4e-31 140.2 256 43.8
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 3.1e-31 139.8 281 44.1
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 4.1e-31 139.4 239 42.3
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 5.3e-31 139.0 199 47.2
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.0e-30 137.1 236 44.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 3.5e-30 136.3 240 42.1
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.3e-29 134.4 242 43.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.3e-29 134.4 237 43.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.5e-29 132.1 250 49.2
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 6.5e-29 132.1 267 38.6
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 8.5e-29 131.7 250 49.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 8.5e-29 131.7 260 40.4
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.1e-28 131.3 268 39.9
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.5e-28 131.0 275 39.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.9e-28 130.6 238 49.6
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.5e-28 130.2 238 41.6
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 9.4e-28 128.3 234 43.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.7e-27 126.7 158 50.6
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.6e-27 126.3 238 41.6
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.3e-26 123.6 246 39.8
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.5e-25 120.9 214 42.5
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.0e-25 120.6 268 38.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.6e-25 120.2 274 37.2
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.6e-25 120.2 244 40.6
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 7.5e-25 118.6 233 39.9
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.3e-24 117.9 204 41.2
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-24 117.5 262 38.9
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 4.8e-24 115.9 261 36.8
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.4e-23 114.4 259 36.7
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.1e-23 112.8 252 42.5
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.0e-23 112.1 274 35.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.7e-22 110.2 264 35.6
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.5e-22 109.8 246 39.8
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 4.5e-22 109.4 246 37.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 4.5e-22 109.4 125 52.0
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.3e-21 107.8 260 37.7
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.1e-20 104.8 244 38.9
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.1e-20 104.8 260 35.8
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 9.5e-20 101.7 239 40.6
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 9.5e-20 101.7 251 33.9
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.6e-19 100.9 247 38.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.6e-19 100.9 247 38.9
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.6e-19 100.9 289 36.3
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 4.7e-19 99.4 249 40.6
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.1e-19 99.0 245 36.3
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 8.0e-19 98.6 252 36.1
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 8.0e-19 98.6 197 38.1
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.4e-18 97.8 249 40.6
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.2e-18 95.9 245 35.5
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 5.2e-18 95.9 324 32.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.0e-17 94.0 246 39.4
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.4e-17 93.2 246 33.3
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 4.4e-17 92.8 250 35.6
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 4.4e-17 92.8 259 41.7
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 5.7e-17 92.4 252 34.5
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.2e-16 90.5 257 38.1
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 6.3e-16 89.0 260 41.5
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.1e-15 88.2 208 43.8
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.4e-15 87.8 249 35.3
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 5.4e-15 85.9 243 36.6
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.2e-14 84.7 255 35.7
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.0e-14 84.0 156 37.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 5.9e-14 82.4 118 45.8
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.0e-13 81.6 126 47.6
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 2.3e-13 80.5 343 26.8
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 2.1e-11 73.9 83 54.2
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.7e-11 72.8 242 32.2
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 3.0e-10 70.1 122 40.2
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 1.1e-07 61.6 59 57.6
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 1.4e-07 61.2 151 34.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.4e-07 61.2 310 29.0


User provided reference genes

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