Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0019258 Lotus japonicus HOM05D004274 ORTHO05D004980 4.8e-79 297.7 148 100.0
Ca_15091_v3 Cicer arietinum L. HOM05D004274 ORTHO05D004980 5.3e-70 267.7 159 84.9
Psat5g146320 Pisum sativum HOM05D004274 ORTHO05D004980 1.3e-68 263.1 164 81.7
Glyma.11G201800 Glycine max HOM05D004274 ORTHO05D004980 1.7e-68 262.7 148 86.5
Medtr3g063030 Medicago truncatula HOM05D004274 ORTHO05D004980 4.7e-66 254.6 162 79.6
TPR.G37420 Trifolium pratense HOM05D004274 ORTHO05D004980 2.3e-65 252.3 175 76.0
Phvul.006G082500 Phaseolus vulgaris HOM05D004274 ORTHO05D004980 6.3e-63 244.2 148 81.8
Glyma.18G049000 Glycine max HOM05D004274 ORTHO05D004980 8.2e-63 243.8 159 78.0
arahy.Tifrunner.gnm1.ann1.VY09I5 Arachis hypogaea HOM05D004274 ORTHO05D004980 2.4e-62 242.3 175 72.6
Medtr3g062950 Medicago truncatula HOM05D004274 ORTHO05D004980 2.1e-58 229.2 168 73.8
Lj6g0024729 Lotus japonicus HOM05D004274 ORTHO05D004980 1.1e-54 216.9 144 72.2
Lsat_1_v5_gn_9_15480 Lactuca sativa HOM05D004274 ORTHO05D004980 9.1e-54 213.8 158 67.1
Glyma.18G049100 Glycine max HOM05D004274 ORTHO05D004980 1.2e-53 213.4 154 68.8
Haze_24498 Corylus avellana HOM05D004274 ORTHO05D004980 7.7e-53 210.7 146 69.2
Lalb_Chr15g0085561 Lupinus albus HOM05D004274 ORTHO05D004980 1.3e-52 209.9 162 64.8
Medtr3g062940 Medicago truncatula HOM05D004274 ORTHO05D004980 2.9e-52 208.8 158 65.8
Sed0009740 Sechium edule HOM05D004274 ORTHO05D004980 5.0e-52 208.0 144 70.1
Manes.02G210080 Manihot esculenta HOM05D004274 ORTHO05D004980 4.2e-51 204.9 158 64.6
TPR.G13822 Trifolium pratense HOM05D004274 ORTHO05D004980 4.2e-51 204.9 177 59.9
VMungo0540G0713 Vigna mungo HOM05D004274 ORTHO05D004980 1.2e-50 203.4 179 59.2
Ah.01g002020 Amaranthus hybridus HOM05D004274 ORTHO05D004980 1.6e-50 203.0 142 68.3
Cpa.g.sc84.38 Carica papaya HOM05D004274 ORTHO05D004980 1.6e-50 203.0 143 66.4
Eucgr.D01050 Eucalyptus grandis HOM05D004274 ORTHO05D004980 2.1e-50 202.6 148 66.9
FAN21G2911 Fragaria x ananassa HOM05D004274 ORTHO05D004980 2.7e-50 202.2 158 64.6
Gorai.011G165300 Gossypium raimondii HOM05D004274 ORTHO05D004980 4.7e-50 201.4 143 67.8
Nitab4.5_0000539g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 8.0e-50 200.7 157 63.7
CSS0034718 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 1.0e-49 200.3 146 67.8
Ciclev10006524m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.0e-49 200.3 143 68.5
FAN16G2313 Fragaria x ananassa HOM05D004274 ORTHO05D004980 1.8e-49 199.5 168 61.3
MBI03_g31633_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 2.3e-49 199.1 144 66.7
Nitab4.5_0002399g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 4.0e-49 198.4 155 63.2
ECA247G3741 Erigeron canadensis HOM05D004274 ORTHO05D004980 6.8e-49 197.6 153 64.7
PGR083G2809 Punica granatum HOM05D004274 ORTHO05D004980 6.8e-49 197.6 154 64.9
HanXRQChr13g0391791 Helianthus annuus HOM05D004274 ORTHO05D004980 1.2e-48 196.8 162 62.3
CANSAT54G0105 Cannabis sativa HOM05D004274 ORTHO05D004980 3.4e-48 195.3 154 63.6
arahy.Tifrunner.gnm1.ann1.URW4K1 Arachis hypogaea HOM05D004274 ORTHO05D004980 7.5e-48 194.1 169 59.8
PGSC0003DMG400015127 Solanum tuberosum HOM05D004274 ORTHO05D004980 7.5e-48 194.1 154 62.3
Gohir.A10G118575 Gossypium hirsutum HOM05D004274 ORTHO05D004980 1.3e-47 193.4 153 63.4
Gohir.D10G148100 Gossypium hirsutum HOM05D004274 ORTHO05D004980 1.3e-47 193.4 153 63.4
arahy.Tifrunner.gnm1.ann1.P847CR Arachis hypogaea HOM05D004274 ORTHO05D004980 1.7e-47 193.0 171 58.5
Migut.N00703 Erythranthe guttata HOM05D004274 ORTHO05D004980 2.2e-47 192.6 164 61.0
Rhsim01G0245500 Rhododendron simsii HOM05D004274 ORTHO05D004980 2.2e-47 192.6 178 56.7
Lj2C1107G8 Lonicera japonica HOM05D004274 ORTHO05D004980 2.8e-47 192.2 168 59.5
Lalb_Chr15g0085541 Lupinus albus HOM05D004274 ORTHO05D004980 8.3e-47 190.7 123 76.4
Oeu020453.2 Olea europaea HOM05D004274 ORTHO05D004980 8.3e-47 190.7 170 58.8
CiPaw.13G059500 Carya illinoinensis HOM05D004274 ORTHO05D004980 1.1e-46 190.3 193 52.3
Peaxi162Scf00293g00719 Petunia axillaris HOM05D004274 ORTHO05D004980 1.1e-46 190.3 154 61.0
arahy.Tifrunner.gnm1.ann1.1VUI6H Arachis hypogaea HOM05D004274 ORTHO05D004980 1.4e-46 189.9 111 85.6
PSO384G1823 Papaver somniferum HOM05D004274 ORTHO05D004980 1.4e-46 189.9 151 64.2
Duzib168G2323 Durio zibethinus HOM05D004274 ORTHO05D004980 1.8e-46 189.5 157 61.1
PSO339G1940 Papaver somniferum HOM05D004274 ORTHO05D004980 3.1e-46 188.7 151 63.6
THA.LOC104823773 Tarenaya hassleriana HOM05D004274 ORTHO05D004980 7.0e-46 187.6 149 63.8
Oeu023904.1 Olea europaea HOM05D004274 ORTHO05D004980 2.0e-45 186.0 173 57.2
Hma1.2p1_0161F.1_g071960 Hydrangea macrophylla HOM05D004274 ORTHO05D004980 3.5e-45 185.3 154 61.7
Lsat_1_v5_gn_8_98760 Lactuca sativa HOM05D004274 ORTHO05D004980 3.5e-45 185.3 141 63.1
Sp6g19900 Schrenkiella parvula HOM05D004274 ORTHO05D004980 5.9e-45 184.5 156 60.3
GSVIVG01024520001 Vitis vinifera HOM05D004274 ORTHO05D004980 5.9e-45 184.5 175 55.4
Carub.0008s1878 Capsella rubella HOM05D004274 ORTHO05D004980 7.7e-45 184.1 148 62.2
Cc01_g15600 Coffea canephora HOM05D004274 ORTHO05D004980 1.7e-44 183.0 178 55.1
Os11g0120600 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.7e-44 183.0 148 61.5
AUR62015168 Chenopodium quinoa HOM05D004274 ORTHO05D004980 3.8e-44 181.8 167 56.3
CANSAT54G0115 Cannabis sativa HOM05D004274 ORTHO05D004980 6.5e-44 181.0 157 58.6
CiPaw.14G047000 Carya illinoinensis HOM05D004274 ORTHO05D004980 6.5e-44 181.0 146 62.3
AUR62017620 Chenopodium quinoa HOM05D004274 ORTHO05D004980 8.6e-44 180.6 164 57.3
AT5G58240 Arabidopsis thaliana HOM05D004274 ORTHO05D004980 1.5e-43 179.9 148 60.8
Thhalv10014808m.g Eutrema salsugineum HOM05D004274 ORTHO05D004980 1.5e-43 179.9 148 61.5
Sc04g0008110 Simmondsia chinensis HOM05D004274 ORTHO05D004980 1.9e-43 179.5 156 59.0
Aa31LG11G30 Aethionema arabicum HOM05D004274 ORTHO05D004980 2.5e-43 179.1 168 56.5
Thecc.09G366500 Theobroma cacao HOM05D004274 ORTHO05D004980 2.5e-43 179.1 153 58.8
BcaB01g04543 Brassica carinata HOM05D004274 ORTHO05D004980 3.3e-43 178.7 146 61.6
Sed0016747 Sechium edule HOM05D004274 ORTHO05D004980 5.5e-43 177.9 184 52.7
C09p50090 Brassica napus HOM05D004274 ORTHO05D004980 7.2e-43 177.6 146 61.0
BolC9t57861H Brassica oleracea HOM05D004274 ORTHO05D004980 7.2e-43 177.6 146 61.0
BraA10t43627Z Brassica rapa HOM05D004274 ORTHO05D004980 7.2e-43 177.6 146 61.0
A10p15980 Brassica napus HOM05D004274 ORTHO05D004980 9.5e-43 177.2 146 61.0
Aqoxy2G00658 Aquilegia oxysepala HOM05D004274 ORTHO05D004980 1.2e-42 176.8 144 63.2
BcaC04g19900 Brassica carinata HOM05D004274 ORTHO05D004980 1.6e-42 176.4 146 60.3
ClCG10G003560 Citrullus lanatus HOM05D004274 ORTHO05D004980 2.1e-42 176.0 151 57.6
RcHm_v2.0_Chr5g0074041 Rosa chinensis HOM05D004274 ORTHO05D004980 4.7e-42 174.9 144 63.9
SalBow2G3254 Salvia bowleyana HOM05D004274 ORTHO05D004980 6.1e-42 174.5 144 63.2
Zm00001eb265500 Zea mays HOM05D004274 ORTHO05D004980 8.0e-42 174.1 138 63.8
Ciclev10006852m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.4e-41 173.3 194 49.5
CsaV3_3G000810 Cucumis sativus L. HOM05D004274 ORTHO05D004980 2.3e-41 172.6 207 46.4
AL8G34340 Arabidopsis lyrata HOM05D004274 ORTHO05D004980 3.0e-41 172.2 157 55.4
Prupe.6G037600 Prunus persica HOM05D004274 ORTHO05D004980 3.0e-41 172.2 144 60.4
Psat5g146360 Pisum sativum HOM05D004274 ORTHO05D004980 6.8e-41 171.0 172 52.9
FAN11G1599 Fragaria x ananassa HOM05D004274 ORTHO05D004980 1.5e-40 169.9 155 58.7
PSO339G1462 Papaver somniferum HOM05D004274 ORTHO05D004980 1.5e-40 169.9 155 57.4
SEGI_00344 Sequoiadendron giganteum HOM05D004274 ORTHO05D004980 2.0e-40 169.5 148 58.1
TWI32G0546 Tripterygium wilfordii HOM05D004274 ORTHO05D004980 4.4e-40 168.3 143 59.4
MELO3C013768.2 Cucumis melo HOM05D004274 ORTHO05D004980 7.5e-40 167.5 216 44.0
vmacro14660 Vaccinium macrocarpon HOM05D004274 ORTHO05D004980 4.9e-39 164.9 131 64.1
RcHm_v2.0_Chr5g0074031 Rosa chinensis HOM05D004274 ORTHO05D004980 6.3e-39 164.5 107 73.8
Atru.chr1.1109 Acer truncatum HOM05D004274 ORTHO05D004980 2.0e-37 159.5 141 57.4
COL.COLO4_34964 Corchorus olitorius HOM05D004274 ORTHO05D004980 2.7e-37 159.1 106 74.5
Potri.013G161100 Populus trichocarpa HOM05D004274 ORTHO05D004980 2.7e-37 159.1 120 65.0
MD03G1046300 Malus domestica HOM05D004274 ORTHO05D004980 4.5e-37 158.3 107 70.1
Potri.019G133200 Populus trichocarpa HOM05D004274 ORTHO05D004980 5.9e-37 157.9 106 70.8
HPP92_015444 Vanilla planifolia HOM05D004274 ORTHO05D004980 5.9e-37 157.9 106 70.8
Atru.chr1.1108 Acer truncatum HOM05D004274 ORTHO05D004980 7.8e-37 157.5 107 72.0
CAN.G3.27 Capsicum annuum HOM05D004274 ORTHO05D004980 7.8e-37 157.5 112 67.0
Eucgr.D01049 Eucalyptus grandis HOM05D004274 ORTHO05D004980 7.8e-37 157.5 107 72.0
EL10Ac9g22874 Beta vulgaris HOM05D004274 ORTHO05D004980 1.0e-36 157.1 118 66.1
Sc14g0008130 Simmondsia chinensis HOM05D004274 ORTHO05D004980 1.0e-36 157.1 129 62.0
TAR633G0792 Trochodendron aralioides HOM05D004274 ORTHO05D004980 1.7e-36 156.4 106 73.6
Sabra19G0129400 Salix brachista HOM05D004274 ORTHO05D004980 2.3e-36 156.0 106 69.8
Dinv28766 Davidia involucrata HOM05D004274 ORTHO05D004980 2.9e-36 155.6 107 72.0
ATR0743G223 Amborella trichopoda HOM05D004274 ORTHO05D004980 6.6e-36 154.5 107 69.2
CBR_g39157 Chara braunii HOM05D004274 ORTHO05D004980 6.6e-36 154.5 148 52.7
CDE08G1523 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 1.5e-35 153.3 108 68.5
FvH4_3g41230 Fragaria vesca HOM05D004274 ORTHO05D004980 2.8e-34 149.1 151 55.0
CARHR272040 Cardamine hirsuta HOM05D004274 ORTHO05D004980 6.1e-34 147.9 117 60.7
Os11g0120725 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.0e-33 147.1 148 51.4
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 1.4e-33 146.7 148 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3513 Anthoceros agrestis HOM05D004274 ORTHO05D004980 1.8e-33 146.4 154 52.6
SMO351G0049 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 2.3e-33 146.0 151 50.3
MD11G1049100 Malus domestica HOM05D004274 ORTHO05D004980 3.0e-33 145.6 139 55.4
Sed0025842 Sechium edule HOM05D004274 ORTHO05D004980 2.6e-32 142.5 126 57.9
Actinidia23822 Actinidia chinensis HOM05D004274 ORTHO05D004980 2.9e-31 139.0 146 54.1
ECA236G4332 Erigeron canadensis HOM05D004274 ORTHO05D004980 6.4e-31 137.9 94 69.1
MCO06G292 Micromonas commoda HOM05D004274 ORTHO05D004980 1.4e-30 136.7 146 50.7
SMO163G0095 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 3.2e-30 135.6 167 45.5
Cre17.g698266 Chlamydomonas reinhardtii HOM05D004274 ORTHO05D004980 4.1e-30 135.2 160 47.5
Ciclev10005970m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.2e-29 133.7 145 50.3
PRCOL_00000589 Prasinoderma coloniale HOM05D004274 ORTHO05D004980 1.6e-29 133.3 144 50.0
MELO3C014026.2 Cucumis melo HOM05D004274 ORTHO05D004980 2.1e-26 122.9 110 54.5
Pp3c4_3210 Physcomitrium patens HOM05D004274 ORTHO05D004980 2.1e-26 122.9 125 50.4
CSS0035716 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 1.1e-25 120.6 115 56.5
Nn4g26698 Nelumbo nucifera HOM05D004274 ORTHO05D004980 1.1e-25 120.6 154 48.1
Hund24406 Selenicereus undatus HOM05D004274 ORTHO05D004980 4.4e-24 115.2 73 69.9
CSS0003603 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 1.7e-23 113.2 85 65.9
HanXRQChr08g0231121 Helianthus annuus HOM05D004274 ORTHO05D004980 2.2e-23 112.8 98 63.3
SGA_v2.0_scaffold8G04481 Striga asiatica HOM05D004274 ORTHO05D004980 2.2e-23 112.8 148 47.3
unitig_26.g10228 Utricularia gibba HOM05D004274 ORTHO05D004980 3.7e-23 112.1 110 57.3
QL01p023459 Quercus lobata HOM05D004274 ORTHO05D004980 3.2e-22 109.0 79 68.4
MBI03_g31635_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 2.7e-21 105.9 67 76.1
ClCG00G000300 Citrullus lanatus HOM05D004274 ORTHO05D004980 1.7e-20 103.2 151 41.7
MBI03_g31636_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 1.7e-20 103.2 69 72.5
Lsat_1_v5_gn_1_8900 Lactuca sativa HOM05D004274 ORTHO05D004980 8.9e-17 90.9 62 72.6
Os12g0120400 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.2e-16 90.5 73 53.4
FvH4_3g41190 Fragaria vesca HOM05D004274 ORTHO05D004980 9.9e-16 87.4 108 45.4
ClCG00G001760 Citrullus lanatus HOM05D004274 ORTHO05D004980 4.9e-15 85.1 79 54.4
EL10Ac9g22873 Beta vulgaris HOM05D007938 ORTHO05D009929 1.4e-14 83.6 134 39.6
FAN12G2850 Fragaria x ananassa HOM05D004274 ORTHO05D004980 9.2e-14 80.9 114 46.5
FvH4_4g07220 Fragaria vesca HOM05D004274 ORTHO05D004980 1.6e-13 80.1 114 46.5
Haze_26272 Corylus avellana HOM05D001787 ORTHO05D007379 1.0e-12 77.4 154 37.0
Os09g0246250 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.4e-09 67.0 47 57.4
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 6.8e-09 64.7 72 44.4
Dinv28765 Davidia involucrata HOM05D004274 ORTHO05D004980 7.6e-08 61.2 36 72.2
Solyc09g018630.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 9.9e-08 60.8 44 63.6
Actinidia34514 Actinidia chinensis HOM05D004274 ORTHO05D004980 4.9e-07 58.5 36 69.4
RcHm_v2.0_Chr1g0353171 Rosa chinensis HOM05D004274 ORTHO05D004980 1.4e-06 57.0 80 42.5
arahy.Tifrunner.gnm1.ann1.8HSJ02 Arachis hypogaea HOM05D002696 ORTHO05D011600 2.4e-06 56.2 58 53.4
QL01p023462 Quercus lobata HOM05D004274 ORTHO05D004980 5.4e-06 55.1 43 58.1


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