Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 2.1e-294 1015.0 531 100.0
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 2.7e-156 556.2 332 86.4
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 8.4e-142 508.1 338 78.4
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 1.4e-141 507.3 327 79.5
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 1.9e-141 506.9 327 79.5
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 1.6e-140 503.8 327 79.2
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 2.8e-137 493.0 319 79.0
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 6.2e-137 491.9 319 78.7
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 2.4e-136 490.0 317 79.5
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 7.6e-135 485.0 319 77.4
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 3.9e-131 472.6 324 74.7
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 5.6e-130 468.8 322 73.3
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.6e-129 467.2 324 74.1
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.4e-128 464.2 317 74.4
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 3.1e-128 463.0 317 72.2
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 6.9e-128 461.8 323 73.1
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 2.2e-126 456.8 316 73.7
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 3.8e-126 456.1 321 72.9
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 7.1e-125 451.8 323 70.9
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.2e-124 451.1 320 70.9
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 1.6e-124 450.7 330 71.2
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 2.1e-124 450.3 318 71.7
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 2.1e-124 450.3 324 71.9
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 2.1e-124 450.3 316 71.8
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 2.7e-124 449.9 317 72.6
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 3.5e-124 449.5 314 72.9
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 2.3e-123 446.8 328 69.8
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 1.9e-122 443.7 322 70.2
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 4.3e-122 442.6 316 70.6
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 1.3e-121 441.0 317 71.0
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 1.6e-121 440.7 316 70.9
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 2.1e-121 440.3 316 70.3
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 2.1e-121 440.3 351 66.1
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 4.8e-121 439.1 347 65.7
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 2.4e-120 436.8 322 70.2
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 3.1e-120 436.4 321 70.4
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 3.1e-120 436.4 316 69.6
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.1e-120 436.0 321 70.1
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 5.3e-120 435.6 355 64.2
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 6.9e-120 435.3 317 70.0
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 6.9e-120 435.3 317 68.8
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.2e-119 434.5 347 65.4
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 2.0e-119 433.7 320 70.0
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 2.0e-119 433.7 322 67.1
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 2.0e-119 433.7 321 67.9
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 2.0e-119 433.7 334 67.4
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 3.4e-119 433.0 322 69.6
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.7e-118 430.6 316 67.7
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 2.2e-118 430.3 321 69.2
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 2.9e-118 429.9 361 64.0
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 2.9e-118 429.9 360 63.3
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 3.8e-118 429.5 355 64.5
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 5.0e-118 429.1 360 63.9
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 6.5e-118 428.7 321 69.2
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 8.5e-118 428.3 315 69.2
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 8.5e-118 428.3 316 67.7
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 2.5e-117 426.8 321 68.5
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 2.5e-117 426.8 316 67.7
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 2.5e-117 426.8 353 63.7
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 4.2e-117 426.0 312 69.9
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.6e-116 424.1 320 65.9
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 2.1e-116 423.7 322 68.0
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 2.1e-116 423.7 386 60.6
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 2.1e-116 423.7 332 66.6
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 2.1e-116 423.7 319 68.0
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 1.8e-115 420.6 316 66.8
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 2.3e-115 420.2 321 67.3
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 3.9e-115 419.5 322 67.7
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 5.1e-115 419.1 320 67.5
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 5.1e-115 419.1 323 66.9
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 6.7e-115 418.7 313 67.1
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 8.7e-115 418.3 321 67.6
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 8.7e-115 418.3 321 67.6
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-114 417.9 330 65.5
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 1.1e-114 417.9 364 61.5
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 1.9e-114 417.2 322 65.2
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 9.7e-114 414.8 321 65.7
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 4.8e-113 412.5 367 61.9
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 6.3e-113 412.1 309 69.3
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 1.4e-112 411.0 322 64.6
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.8e-112 410.6 345 62.9
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 2.4e-112 410.2 321 66.0
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 9.1e-112 408.3 316 67.1
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 1.2e-111 407.9 316 66.5
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 5.9e-111 405.6 313 67.1
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 1.3e-110 404.4 358 60.1
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 1.3e-110 404.4 316 65.2
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 3.8e-110 402.9 358 60.1
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 3.8e-110 402.9 293 68.9
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 6.5e-110 402.1 362 60.5
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 8.5e-110 401.7 265 77.7
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.4e-109 401.0 330 64.2
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 2.5e-109 400.2 291 68.7
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 5.5e-109 399.1 284 71.5
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 3.6e-108 396.4 310 64.5
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.0e-107 394.8 346 61.0
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 1.0e-107 394.8 320 64.1
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 2.2e-105 387.1 311 65.3
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 4.1e-104 382.9 387 54.5
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 1.2e-103 381.3 258 74.0
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.4e-103 379.8 306 65.4
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 8.2e-97 358.6 257 70.4
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 1.4e-96 357.8 244 71.7
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.4e-96 357.1 258 71.3
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 1.1e-93 348.2 306 61.1
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 5.2e-91 339.3 311 60.5
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 1.1e-88 331.6 310 55.5
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 1.0e-86 325.1 263 65.0
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 9.4e-85 318.5 282 61.0
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 2.1e-84 317.4 316 53.2
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 2.6e-82 310.5 253 64.0
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 4.1e-80 303.1 330 48.2
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 9.1e-80 302.0 192 80.2
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 3.2e-77 293.5 191 79.6
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 9.5e-77 292.0 316 53.5
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.1e-76 290.8 224 67.4
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 1.8e-75 287.7 372 49.2
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 7.5e-74 282.3 202 70.3
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 4.1e-72 276.6 327 50.2
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 7.0e-72 275.8 196 70.4
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 2.9e-70 270.4 331 45.6
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 2.6e-66 257.3 175 74.3
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 6.4e-65 252.7 285 49.1
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 3.9e-62 243.4 193 69.9
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 6.6e-62 242.7 168 74.4
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.3e-61 240.4 201 61.7
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.0e-58 231.1 339 37.8
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.6e-58 230.7 198 63.1
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 7.5e-50 202.6 346 36.7
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.9e-46 190.3 157 62.4
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 8.1e-44 182.6 344 37.2
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 3.5e-39 167.2 248 40.3
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 7.8e-39 166.0 158 53.8
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 3.0e-38 164.1 282 36.5
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.5e-37 161.0 129 62.8
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.3e-37 160.6 126 65.1
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 3.1e-35 154.1 137 60.6
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 1.3e-33 148.7 87 87.4
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.2e-33 147.9 124 56.5
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.4e-32 145.2 125 54.4
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 3.2e-32 144.1 373 30.6
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 1.7e-30 138.3 95 71.6
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 5.6e-29 133.3 306 35.0
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.3e-28 132.1 120 59.2
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 2.1e-23 114.8 70 77.1
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 5.1e-22 110.2 65 80.0
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.4e-16 92.0 71 62.0
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 6.5e-09 66.6 42 73.8
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 2.1e-07 61.6 58 51.7


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