Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0016441 Lotus japonicus HOM05D007499 ORTHO05D010522 5.3e-198 694.1 338 100.0
Lj6g0022859 Lotus japonicus HOM05D007499 ORTHO05D010522 1.6e-183 646.0 312 100.0
LjContig00312_ERROPOS870357g0000618 Lotus japonicus HOM05D007499 ORTHO05D010522 9.2e-94 347.8 297 56.9
Lj4g0004006 Lotus japonicus HOM05D007499 ORTHO05D010522 4.7e-90 335.5 300 54.0
Lj4g0009300 Lotus japonicus HOM05D007499 ORTHO05D010522 2.4e-73 280.0 298 48.3
Lj6g0021814 Lotus japonicus HOM05D007499 ORTHO05D010522 8.7e-60 235.0 293 40.6
Lj5g0011370 Lotus japonicus HOM05D007499 ORTHO05D010522 3.7e-58 229.6 298 39.6
LjContig00564g0005268 Lotus japonicus HOM05D007499 ORTHO05D010522 3.7e-58 229.6 298 39.6
Lj1g0019213 Lotus japonicus HOM05D007499 ORTHO05D010522 1.1e-54 218.0 298 38.9
Lj6g0001217 Lotus japonicus HOM05D007499 ORTHO05D010522 3.6e-53 213.0 292 36.6
Lj1g0005428 Lotus japonicus HOM05D007499 ORTHO05D010522 3.0e-52 209.9 295 35.6
Lj1g0018428 Lotus japonicus HOM05D007499 ORTHO05D010522 3.0e-52 209.9 295 35.6
LjContig00312_ERROPOS870357g0011073 Lotus japonicus HOM05D007499 ORTHO05D010522 6.7e-52 208.8 290 37.6
Lj4g0024829 Lotus japonicus HOM05D007499 ORTHO05D010522 1.1e-49 201.4 293 35.5
LjContig00571g0020559 Lotus japonicus HOM05D007499 ORTHO05D010522 1.4e-49 201.1 295 34.6
Lj1g0024942 Lotus japonicus HOM05D007499 ORTHO05D010522 3.1e-49 199.9 132 69.7
Lj3g0013394 Lotus japonicus HOM05D007499 ORTHO05D010522 3.1e-49 199.9 311 33.8
Lj5g0027118 Lotus japonicus HOM05D007499 ORTHO05D010522 6.9e-49 198.7 326 35.3
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 8.5e-39 165.2 285 30.9
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 1.9e-38 164.1 293 29.4
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 5.5e-38 162.5 287 30.3
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 6.1e-37 159.1 293 31.4
Lj2g0019243 Lotus japonicus HOM05D007499 ORTHO05D010522 2.3e-36 157.1 240 35.4
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 3.3e-35 153.3 292 30.5
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 9.7e-35 151.8 292 30.1
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 9.7e-35 151.8 292 30.1
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 9.7e-35 151.8 292 30.1
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 9.7e-35 151.8 292 30.1
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 3.1e-33 146.7 299 27.1
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 2.0e-32 144.1 292 29.5
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 5.9e-32 142.5 295 28.8
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 1.3e-31 141.4 213 36.2
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 8.5e-31 138.7 288 26.4
Lj6g0019094 Lotus japonicus HOM05D007499 ORTHO05D010522 1.9e-30 137.5 207 33.8
Lj4g0014113 Lotus japonicus HOM05D007499 ORTHO05D010522 7.2e-30 135.6 298 30.9
Lj4g0008637 Lotus japonicus HOM05D007499 ORTHO05D010522 3.6e-29 133.3 239 31.0
LjContig00357g0023977 Lotus japonicus HOM05D007499 ORTHO05D010522 3.6e-29 133.3 298 28.5
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 2.0e-27 127.5 269 26.0
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 2.2e-26 124.0 201 29.4
Lj5g0003409 Lotus japonicus HOM05D007499 ORTHO05D010522 1.8e-25 120.9 290 27.9
LjContig00357g0026360 Lotus japonicus HOM05D007499 ORTHO05D009491 5.3e-25 119.4 240 29.2
arahy.Tifrunner.gnm1.ann1.7NF8CM Arachis hypogaea HOM05D007334 ORTHO05D009978 7.0e-25 119.0 299 24.1
Lj3g0016929 Lotus japonicus HOM05D007499 ORTHO05D010522 1.6e-24 117.9 202 32.7
Lj2g0011736 Lotus japonicus HOM05D007499 ORTHO05D010522 1.3e-23 114.8 159 37.1
TPR.G39726 Trifolium pratense HOM05D007499 ORTHO05D009491 2.9e-23 113.6 204 29.4
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 4.2e-22 109.8 260 25.0
TPR.G14684 Trifolium pratense HOM05D007499 ORTHO05D000174 4.2e-22 109.8 267 25.1
Lj2g0024420 Lotus japonicus HOM05D007499 ORTHO05D000174 2.1e-21 107.5 90 58.9
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.8e-20 104.4 230 26.5
Lj6g0015595 Lotus japonicus HOM05D007499 ORTHO05D010522 2.3e-20 104.0 240 30.0
TPR.G16827 Trifolium pratense HOM05D000096 ORTHO05D000045 2.0e-19 100.9 287 24.7
Lj1g0027259 Lotus japonicus HOM05D020600 ORTHO05D010522 8.3e-18 95.5 101 41.6
LjContig00571g0009576 Lotus japonicus HOM05D020600 ORTHO05D010522 1.1e-17 95.1 96 42.7
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 1.1e-17 95.1 196 25.5
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 2.4e-17 94.0 288 24.0
Lj3g0018091 Lotus japonicus HOM05D020600 ORTHO05D010522 4.1e-17 93.2 101 41.6
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 7.0e-17 92.4 288 24.3
arahy.Tifrunner.gnm1.ann1.T80IJN Arachis hypogaea HOM05D010809 ORTHO05D009978 1.2e-16 91.7 306 24.2
arahy.Tifrunner.gnm1.ann1.HP5C5B Arachis hypogaea HOM05D012160 ORTHO05D009491 1.6e-16 91.3 175 28.6
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.6e-16 91.3 291 27.1
Lj6g0002419 Lotus japonicus HOM05D007499 ORTHO05D010522 1.6e-16 91.3 129 35.7
Lj2g0018579 Lotus japonicus HOM05D007499 ORTHO05D000174 5.9e-16 89.4 174 31.0
Medtr6g051890 Medicago truncatula HOM05D000353 ORTHO05D000174 5.9e-16 89.4 137 34.3
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.0e-15 88.6 238 25.6
arahy.Tifrunner.gnm1.ann1.D79306 Arachis hypogaea HOM05D007334 ORTHO05D009978 1.7e-15 87.8 409 21.0
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 8.6e-15 85.5 315 25.7
TPR.G15524 Trifolium pratense HOM05D007499 ORTHO05D009491 1.1e-14 85.1 123 30.9
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 1.9e-14 84.3 287 21.3
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 3.3e-14 83.6 299 23.4
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 5.5e-14 82.8 169 27.8
Lj1g0003435 Lotus japonicus HOM05D007499 ORTHO05D000174 9.5e-14 82.0 166 28.3
Medtr2g048550 Medicago truncatula HOM05D000353 ORTHO05D000174 9.5e-14 82.0 289 24.6
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 1.2e-13 81.6 315 21.3
TPR.G16048 Trifolium pratense HOM05D001993 ORTHO05D004040 1.2e-13 81.6 106 34.9
TPR.G14129 Trifolium pratense HOM05D007499 ORTHO05D009491 2.1e-13 80.9 108 29.6
arahy.Tifrunner.gnm1.ann1.36ZJIB Arachis hypogaea HOM05D002441 ORTHO05D002376 2.8e-13 80.5 286 25.9
arahy.Tifrunner.gnm1.ann1.RS3EFR Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-13 80.1 250 24.0
TPR.G14138 Trifolium pratense HOM05D000096 ORTHO05D000045 4.7e-13 79.7 214 23.8
TPR.G16855 Trifolium pratense HOM05D007499 ORTHO05D009491 4.7e-13 79.7 135 28.9
TPR.G27599 Trifolium pratense HOM05D007499 ORTHO05D009491 4.7e-13 79.7 143 32.2
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 4.7e-13 79.7 205 22.0
arahy.Tifrunner.gnm1.ann1.GIN4EI Arachis hypogaea HOM05D000353 ORTHO05D000174 6.1e-13 79.3 250 24.4
TPR.G8670 Trifolium pratense HOM05D007499 ORTHO05D009491 6.1e-13 79.3 130 30.8
arahy.Tifrunner.gnm1.ann1.549JJ1 Arachis hypogaea HOM05D007334 ORTHO05D009978 8.0e-13 79.0 339 21.8
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 8.0e-13 79.0 303 23.8
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 8.0e-13 79.0 156 28.8
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 1.0e-12 78.6 300 23.7
Lj5g0022210 Lotus japonicus HOM05D007499 ORTHO05D010522 1.4e-12 78.2 106 37.7
arahy.Tifrunner.gnm1.ann1.A8IEE6 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.3e-12 77.4 250 23.6
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-12 77.0 235 26.0
Lj4g0019428 Lotus japonicus HOM05D007499 ORTHO05D237158 4.0e-12 76.6 50 70.0
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 6.8e-12 75.9 303 23.4
TPR.G38513 Trifolium pratense HOM05D007499 ORTHO05D009491 6.8e-12 75.9 101 32.7
TPR.G38734 Trifolium pratense HOM05D027356 ORTHO05D009491 6.8e-12 75.9 122 32.0
TPR.G9150 Trifolium pratense HOM05D007499 ORTHO05D000174 6.8e-12 75.9 267 22.8
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 8.9e-12 75.5 294 25.9
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 288 26.0
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-11 75.1 294 25.9
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 2.0e-11 74.3 239 21.3
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 2.0e-11 74.3 212 25.9
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-11 73.6 257 26.1
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 4.4e-11 73.2 294 24.8
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-11 73.2 257 26.1
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 5.7e-11 72.8 303 21.8
arahy.Tifrunner.gnm1.ann1.HXT0UR Arachis hypogaea HOM05D000353 ORTHO05D000174 5.7e-11 72.8 249 23.3
arahy.Tifrunner.gnm1.ann1.NFD50Z Arachis hypogaea HOM05D000353 ORTHO05D000174 9.8e-11 72.0 259 23.2
Lj2g0016517 Lotus japonicus HOM05D007499 ORTHO05D010522 9.8e-11 72.0 100 37.0
Lj6g0022343 Lotus japonicus HOM05D007499 ORTHO05D010522 9.8e-11 72.0 100 37.0
LjContig00081g0025846 Lotus japonicus HOM05D007499 ORTHO05D010522 9.8e-11 72.0 207 27.1
LjContig00389g0005000 Lotus japonicus HOM05D007499 ORTHO05D010522 9.8e-11 72.0 100 37.0
TPR.G39727 Trifolium pratense HOM05D028938 ORTHO05D009491 9.8e-11 72.0 115 28.7
arahy.Tifrunner.gnm1.ann1.C28E5T Arachis hypogaea HOM05D010000 ORTHO05D009491 1.7e-10 71.2 137 33.6
Lj2g0003013 Lotus japonicus HOM05D020600 ORTHO05D010522 1.7e-10 71.2 67 47.8
TPR.G8849 Trifolium pratense HOM05D007499 ORTHO05D009491 2.2e-10 70.9 110 27.3
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 2.8e-10 70.5 294 24.5
TPR.G17763 Trifolium pratense HOM05D007499 ORTHO05D009491 2.8e-10 70.5 126 30.2
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 6.3e-10 69.3 298 22.1
TPR.G39019 Trifolium pratense HOM05D007499 ORTHO05D009491 6.3e-10 69.3 94 29.8
arahy.Tifrunner.gnm1.ann1.6U7VQG Arachis hypogaea HOM05D002441 ORTHO05D002376 8.3e-10 68.9 195 25.1
arahy.Tifrunner.gnm1.ann1.K0L2P8 Arachis hypogaea HOM05D010809 ORTHO05D009978 8.3e-10 68.9 216 22.7
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 68.2 218 23.4
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-09 67.8 257 25.3
Lj1g0020814 Lotus japonicus HOM05D016976 ORTHO05D000174 1.8e-09 67.8 161 27.3
TPR.G14905 Trifolium pratense HOM05D007499 ORTHO05D009491 1.8e-09 67.8 110 28.2
Lj1g0001733 Lotus japonicus HOM05D007499 ORTHO05D010522 2.4e-09 67.4 107 36.4
Lj3g0002922 Lotus japonicus HOM05D007499 ORTHO05D010522 2.4e-09 67.4 83 42.2
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-09 67.0 291 24.4
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-09 67.0 244 23.8
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 4.1e-09 66.6 248 25.0
Lj2g0015458 Lotus japonicus HOM05D000353 ORTHO05D000174 4.1e-09 66.6 132 28.8
Lj2g0010283 Lotus japonicus HOM05D007499 ORTHO05D010522 7.0e-09 65.9 122 26.2
Medtr0042s0170 Medicago truncatula HOM05D007499 ORTHO05D009491 1.6e-08 64.7 241 20.3
TPR.G40188 Trifolium pratense HOM05D007499 ORTHO05D009491 2.0e-08 64.3 83 30.1
arahy.Tifrunner.gnm1.ann1.GFA6QK Arachis hypogaea HOM05D007499 ORTHO05D009491 3.5e-08 63.5 93 29.0
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-08 63.5 244 22.5
arahy.Tifrunner.gnm1.ann1.CT1CGZ Arachis hypogaea HOM05D007499 ORTHO05D009491 4.5e-08 63.2 93 29.0
Lj6g0019678 Lotus japonicus HOM05D007499 ORTHO05D000174 4.5e-08 63.2 137 29.9
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 5.9e-08 62.8 255 23.5
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 5.9e-08 62.8 255 23.5
ECA232G2690 Erigeron canadensis HOM05D000353 ORTHO05D000174 5.9e-08 62.8 312 22.1
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-07 61.6 245 22.4
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 61.6 256 23.0
Medtr3g081610 Medicago truncatula HOM05D007499 ORTHO05D009491 1.7e-07 61.2 105 29.5
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-07 60.8 266 23.3
Lj1g0011210 Lotus japonicus HOM05D007499 ORTHO05D010522 2.3e-07 60.8 96 35.4
Medtr6g069230 Medicago truncatula HOM05D007499 ORTHO05D000174 2.3e-07 60.8 158 26.6
arahy.Tifrunner.gnm1.ann1.C5WM5N Arachis hypogaea HOM05D007334 ORTHO05D009978 2.9e-07 60.5 88 29.5
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 6.6e-07 59.3 257 24.5
Lj6g0015688 Lotus japonicus HOM05D007499 ORTHO05D000174 6.6e-07 59.3 88 29.5
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 6.6e-07 59.3 207 23.2
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 8.6e-07 58.9 266 22.9
BcaB02g11010 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 58.5 248 23.4
BcaC02g10672 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 58.5 257 23.7
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-06 57.8 164 27.4
Lj2g0011029 Lotus japonicus HOM05D000353 ORTHO05D000174 1.9e-06 57.8 143 25.2
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 1.9e-06 57.8 111 29.7
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 3.3e-06 57.0 303 21.8
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 56.6 309 24.6
arahy.Tifrunner.gnm1.ann1.1DX3V0 Arachis hypogaea HOM05D007334 ORTHO05D009978 5.6e-06 56.2 90 28.9
arahy.Tifrunner.gnm1.ann1.W0LS47 Arachis hypogaea HOM05D007334 ORTHO05D009978 5.6e-06 56.2 90 28.9
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-06 56.2 255 22.7
arahy.Tifrunner.gnm1.ann1.BHF996 Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-06 55.8 202 21.8
arahy.Tifrunner.gnm1.ann1.7BVW6E Arachis hypogaea HOM05D007334 ORTHO05D009978 9.5e-06 55.5 90 26.7


User provided reference genes

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