Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 2.3e-94 349.0 184 100.0
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.9e-54 215.3 182 69.8
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 5.1e-54 214.9 233 60.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 7.3e-53 211.1 181 67.4
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 7.6e-50 201.1 181 65.7
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 1.8e-43 179.9 187 59.4
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.7e-41 173.3 190 57.9
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 5.5e-40 168.3 177 57.1
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 6.0e-39 164.9 190 56.8
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.3e-38 163.7 187 57.2
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.3e-38 162.9 183 56.8
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 8.7e-38 161.0 187 50.8
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.5e-37 160.2 191 51.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.5e-37 159.5 182 54.4
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 3.3e-37 159.1 193 53.9
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 7.4e-37 157.9 193 52.3
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 2.8e-36 156.0 182 53.3
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 6.2e-36 154.8 193 53.9
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 2.4e-35 152.9 195 49.2
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 4.1e-35 152.1 181 54.1
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 6.9e-35 151.4 187 55.1
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 2.6e-34 149.4 187 54.5
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 5.8e-34 148.3 188 50.5
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 7.6e-34 147.9 183 51.4
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.2e-33 146.4 210 45.2
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 3.8e-33 145.6 202 49.5
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 5.0e-33 145.2 207 47.8
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 3.2e-32 142.5 196 48.0
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 7.2e-32 141.4 183 53.6
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 7.2e-32 141.4 208 46.6
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 2.7e-31 139.4 182 52.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 3.5e-31 139.0 199 49.2
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 4.6e-31 138.7 187 47.6
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 7.9e-31 137.9 200 45.5
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 7.9e-31 137.9 190 48.4
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.8e-30 136.7 194 49.0
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.3e-30 136.3 203 44.8
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.9e-30 135.6 179 53.1
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 6.7e-30 134.8 192 46.4
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 6.7e-30 134.8 186 47.3
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 6.7e-30 134.8 204 47.5
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.1e-29 134.0 198 45.5
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 3.3e-29 132.5 201 41.8
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 4.3e-29 132.1 218 43.1
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 4.3e-29 132.1 183 50.3
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.7e-29 131.7 185 47.6
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.7e-29 131.7 199 42.7
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.7e-29 131.7 199 42.7
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 7.4e-29 131.3 182 47.3
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.7e-28 129.0 207 40.6
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 8.2e-28 127.9 207 40.1
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.2e-28 127.9 207 40.6
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 8.2e-28 127.9 186 47.8
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 3.1e-27 125.9 210 44.3
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 6.9e-27 124.8 197 47.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 2.0e-26 123.2 176 43.8
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 2.6e-26 122.9 174 44.8
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 5.9e-26 121.7 207 43.5
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 2.9e-25 119.4 180 44.4
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 6.5e-25 118.2 197 39.6
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.1e-24 117.5 196 43.4
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.9e-24 116.7 213 42.3
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.9e-24 116.7 174 45.4
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 4.2e-24 115.5 208 40.4
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 7.2e-24 114.8 179 46.9
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.1e-23 113.2 210 39.0
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 4.6e-23 112.1 182 44.0
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 6.1e-23 111.7 173 42.8
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 6.1e-23 111.7 182 46.7
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 1.4e-22 110.5 171 43.3
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 3.0e-22 109.4 194 39.2
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 8.8e-22 107.8 198 38.9
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 8.8e-22 107.8 155 47.7
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.5e-21 107.1 160 42.5
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 2.0e-21 106.7 208 41.8
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 3.3e-21 105.9 171 45.6
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 5.7e-21 105.1 198 40.4
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 5.7e-21 105.1 218 39.9
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-20 103.6 177 39.5
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 1.8e-19 100.1 171 40.9
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 4.1e-19 99.0 154 44.8
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 7.7e-18 94.7 89 58.4
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.3e-17 94.0 178 39.9
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.7e-17 93.6 222 36.9
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.8e-17 92.4 172 40.7
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.9e-16 90.1 210 38.1
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 3.2e-16 89.4 213 34.7
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.2e-15 87.4 132 37.9
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 2.7e-15 86.3 138 44.2
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.8e-14 83.6 162 37.7
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 2.6e-13 79.7 142 42.3
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 4.4e-13 79.0 129 44.2
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 1.4e-11 73.9 86 52.3
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.5e-10 69.3 60 65.0
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 3.6e-07 59.3 163 35.0
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 5.2e-06 55.5 26 96.2
SEGI_40281 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 8.8e-06 54.7 149 30.9


User provided reference genes

Program Settings