Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 0.0e+00 1480.3 769 100.0
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 6.0e-258 894.4 821 61.6
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 8.1e-255 884.0 768 64.2
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 6.9e-254 880.9 768 64.6
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 7.1e-251 870.9 767 63.9
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 1.7e-244 849.7 760 63.3
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 7.2e-243 844.3 750 61.6
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 7.2e-243 844.3 750 61.6
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 2.9e-236 822.4 779 60.6
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 3.8e-236 822.0 784 60.7
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 2.1e-234 816.2 784 60.6
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.7e-234 815.8 779 60.2
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 2.2e-231 806.2 884 54.3
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 1.4e-230 803.5 859 55.3
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 3.7e-223 778.9 733 61.4
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 5.3e-222 775.0 893 52.3
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 3.6e-218 762.3 778 56.7
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 2.3e-217 759.6 778 57.3
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.3e-215 753.8 750 58.3
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 1.4e-214 750.4 770 56.2
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.0e-209 734.2 778 54.5
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 2.0e-200 703.4 778 53.9
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 9.8e-200 701.0 792 52.5
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 5.9e-197 691.8 797 51.7
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 2.9e-196 689.5 803 50.7
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 1.2e-194 684.1 787 52.5
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 3.0e-193 679.5 784 51.9
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 4.4e-192 675.6 788 51.4
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 9.8e-192 674.5 789 50.6
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 1.3e-191 674.1 784 52.3
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 3.2e-190 669.5 793 50.7
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 9.2e-190 667.9 767 51.6
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 3.5e-189 666.0 776 51.4
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 1.7e-188 663.7 783 51.1
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.3e-188 663.3 807 51.2
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 5.0e-188 662.1 788 51.5
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 8.6e-188 661.4 795 50.7
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 9.5e-187 657.9 756 51.9
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 3.6e-186 656.0 798 49.1
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 1.1e-185 654.4 775 50.1
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 8.9e-185 651.4 786 51.5
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 1.5e-184 650.6 836 48.6
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.7e-183 647.1 778 49.0
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.4e-182 643.3 826 48.3
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 1.6e-181 640.6 789 49.3
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 1.7e-180 637.1 808 47.9
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.1e-179 634.4 822 48.9
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.5e-179 634.0 826 48.3
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 1.5e-179 634.0 371 91.4
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.5e-179 633.3 823 48.6
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 2.5e-179 633.3 855 46.4
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.3e-179 632.5 772 50.8
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 7.3e-179 631.7 826 48.1
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 9.5e-179 631.3 778 50.4
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 2.6e-176 623.2 763 49.9
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 3.7e-175 619.4 788 49.1
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.9e-174 617.1 788 49.0
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.4e-174 616.7 769 49.2
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 9.2e-174 614.8 787 49.2
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 9.2e-174 614.8 788 48.7
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 1.3e-172 610.9 789 49.2
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 3.9e-172 609.4 786 48.5
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 8.6e-172 608.2 794 48.7
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 2.5e-171 606.7 792 49.4
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 3.3e-171 606.3 752 48.0
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 9.5e-171 604.7 719 50.8
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 9.5e-171 604.7 948 43.1
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 2.8e-170 603.2 748 49.7
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 3.1e-169 599.7 816 46.3
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.3e-167 594.3 779 47.5
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 1.7e-167 594.0 761 47.2
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 1.4e-166 590.9 797 47.3
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 3.2e-166 589.7 778 47.3
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 9.2e-166 588.2 771 46.8
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 1.6e-165 587.4 796 46.4
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 2.1e-165 587.0 775 46.7
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 2.1e-165 587.0 775 46.7
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 2.7e-165 586.6 795 46.9
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 4.6e-165 585.9 796 46.4
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 1.0e-164 584.7 784 45.8
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 3.0e-164 583.2 844 44.5
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.9e-163 580.5 783 45.8
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 4.3e-163 579.3 842 45.0
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 9.6e-163 578.2 825 45.7
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 1.2e-162 577.8 800 46.8
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 6.2e-162 575.5 742 48.4
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 8.1e-162 575.1 775 45.9
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 1.1e-161 574.7 751 47.0
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 6.9e-161 572.0 824 45.1
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 4.4e-160 569.3 773 45.9
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 7.6e-160 568.5 786 46.2
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 9.9e-160 568.2 782 46.2
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.3e-159 567.8 812 45.0
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.7e-159 567.4 757 46.6
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 2.2e-159 567.0 786 44.9
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 6.4e-159 565.5 784 45.9
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 8.4e-159 565.1 782 46.3
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 1.9e-158 563.9 797 44.7
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 4.2e-158 562.8 782 46.2
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 9.3e-158 561.6 791 45.8
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 9.3e-158 561.6 778 45.2
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 2.1e-157 560.5 791 45.5
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 4.6e-157 559.3 783 44.7
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.0e-156 558.1 804 45.1
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 1.0e-156 558.1 779 44.8
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 1.7e-156 557.4 901 43.2
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 8.7e-156 555.1 859 42.8
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 1.5e-155 554.3 843 42.9
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 5.6e-155 552.4 782 45.1
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 9.6e-155 551.6 859 43.1
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 1.3e-154 551.2 843 43.1
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 2.4e-153 547.0 802 45.0
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 6.9e-153 545.4 793 44.3
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.2e-152 544.7 775 44.4
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 5.8e-152 542.3 801 44.2
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 6.4e-151 538.9 788 45.7
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.1e-150 538.1 809 44.4
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 3.2e-150 536.6 790 43.3
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 3.2e-150 536.6 790 43.3
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 4.2e-150 536.2 801 45.8
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 1.3e-146 524.6 777 44.1
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 4.6e-141 506.1 671 46.5
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 5.1e-140 502.7 795 41.9
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 2.1e-138 497.3 767 43.5
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 1.5e-136 491.1 786 41.5
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 7.9e-133 478.8 801 42.2
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 2.1e-117 427.6 788 40.2
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 6.3e-114 416.0 749 39.5
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 5.0e-111 406.4 786 39.7
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 3.6e-109 400.2 746 39.3
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 8.5e-103 379.0 802 34.8
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 8.5e-103 379.0 802 34.8
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 9.4e-102 375.6 258 81.0
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 5.7e-99 366.3 663 39.5
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 1.0e-95 355.5 876 33.4
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 1.3e-95 355.1 752 35.5
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.4e-84 318.5 519 41.8
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 3.4e-83 313.9 323 56.0
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 3.3e-70 270.8 240 58.3
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.5e-67 261.9 283 49.5
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 2.4e-57 228.0 246 52.4
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 7.8e-56 223.0 960 25.6
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 8.1e-53 213.0 374 41.7
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 7.6e-51 206.5 383 40.5
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 6.4e-50 203.4 351 37.9
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 2.6e-35 154.8 111 73.9
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 4.5e-35 154.1 137 62.0
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 4.2e-33 147.5 444 31.1
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 6.7e-31 140.2 197 40.1
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.3e-29 136.0 180 47.2
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 3.4e-27 127.9 161 49.1
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.9e-25 122.1 95 64.2
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.9e-25 122.1 90 66.7
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 3.5e-24 117.9 86 67.4
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 3.0e-23 114.8 156 42.9
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 7.4e-22 110.2 100 60.0
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 1.8e-20 105.5 79 65.8
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 2.4e-20 105.1 100 57.0
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 1.2e-19 102.8 71 70.4
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.2e-19 102.8 104 54.8
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 2.5e-17 95.1 70 62.9
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 8.7e-15 86.7 118 43.2
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 3.3e-14 84.7 86 57.0
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 1.3e-13 82.8 86 47.7
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.8e-12 79.0 60 71.7
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 3.1e-12 78.2 94 48.9
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 5.3e-12 77.4 86 45.3
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 6.9e-12 77.0 62 64.5
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 9.0e-12 76.6 65 52.3
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 1.0e-10 73.2 115 40.0
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 1.7e-10 72.4 55 58.2
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.2e-10 72.0 59 55.9
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 3.6e-08 64.7 97 40.2
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 3.9e-07 61.2 84 42.9
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 3.9e-07 61.2 65 46.2
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 5.7e-06 57.4 123 32.5


User provided reference genes

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