Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 3.1e-204 714.9 361 100.0
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 3.3e-142 508.8 317 79.5
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 5.5e-60 235.7 337 42.4
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 4.3e-57 226.1 313 44.7
Lj5g0003869 Lotus japonicus HOM05D003035 ORTHO05D006294 1.3e-53 214.5 316 40.5
Lj6g0012480 Lotus japonicus HOM05D003035 ORTHO05D006294 1.6e-48 197.6 269 42.8
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-47 194.9 326 41.1
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 5.3e-47 192.6 320 39.1
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 5.1e-42 176.0 297 39.1
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 9.7e-41 171.8 312 36.2
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 1.5e-38 164.5 310 36.5
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 5.9e-38 162.5 332 35.8
Medtr2g020100 Medicago truncatula HOM05D003035 ORTHO05D000440 1.7e-37 161.0 310 34.8
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 2.5e-36 157.1 317 34.7
Lj6g0012545 Lotus japonicus HOM05D003035 ORTHO05D006294 5.2e-34 149.4 249 40.2
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 2.9e-29 133.7 300 32.0
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 4.2e-28 129.8 309 29.4
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.5e-28 129.4 298 31.9
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 3.0e-26 123.6 340 30.3
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 4.0e-26 123.2 344 29.4
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 5.2e-26 122.9 339 29.5
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 6.7e-26 122.5 303 32.3
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 9.7e-25 118.6 299 29.4
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 2.8e-24 117.1 339 31.6
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 2.4e-23 114.0 319 31.3
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 1.2e-22 111.7 325 31.1
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.2e-20 102.4 288 28.5
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 9.4e-20 102.1 206 28.6
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.6e-19 100.1 278 27.3
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 3.6e-19 100.1 292 25.3
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 3.6e-19 100.1 259 29.0
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.4e-18 98.2 291 26.8
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 1.8e-18 97.8 320 26.6
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.6e-17 94.0 282 27.3
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-17 93.6 298 28.5
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 4.4e-17 93.2 284 25.0
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 4.4e-17 93.2 158 36.1
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 7.5e-17 92.4 292 25.0
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-16 91.3 278 27.7
COL.COLO4_30702 Corchorus olitorius HOM05D003035 ORTHO05D000440 8.3e-16 89.0 263 28.1
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.4e-15 88.2 260 26.5
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 1.4e-15 88.2 178 32.0
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 2.4e-15 87.4 263 24.3
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 7.0e-15 85.9 268 24.3
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 9.1e-15 85.5 263 27.4
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 1.2e-14 85.1 302 27.2
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 2.7e-14 84.0 286 26.6
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 2.7e-14 84.0 268 24.6
QL08p010303 Quercus lobata HOM05D003035 ORTHO05D006294 1.0e-13 82.0 203 28.1
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 8.6e-13 79.0 250 26.8
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 1.1e-12 78.6 106 38.7
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-12 78.2 364 25.3
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.5e-12 77.4 179 30.7
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 3.2e-12 77.0 261 25.7
Os09g0384900 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D006294 3.2e-12 77.0 274 24.5
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 7.2e-12 75.9 232 27.2
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 9.5e-12 75.5 378 23.5
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 1.6e-11 74.7 263 26.2
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-11 73.9 209 26.8
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 2.8e-11 73.9 312 26.9
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.4e-10 71.6 265 26.4
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.8e-10 71.2 252 25.8
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.2e-09 68.6 242 24.4
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-09 68.6 211 27.0
TWI38G0420 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 1.5e-09 68.2 227 29.5
PSO339G5542 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-09 67.0 209 27.8
TAR369G0060 Trochodendron aralioides HOM05D001286 ORTHO05D000440 5.7e-09 66.2 250 26.4
Nn1g05876 Nelumbo nucifera HOM05D001286 ORTHO05D000440 9.8e-09 65.5 195 29.2
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 1.3e-08 65.1 271 24.4
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.2e-08 64.3 330 20.0
Lj2P485T10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.8e-08 63.9 246 24.8
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.8e-08 63.9 284 22.2
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 3.7e-08 63.5 116 31.9
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 4.9e-08 63.2 331 22.4
PSO339G4296 Papaver somniferum HOM05D003035 ORTHO05D000440 4.9e-08 63.2 316 22.8
Lj2P545T26 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-07 62.0 252 25.4
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.4e-07 61.6 261 23.0
COL.COLO4_18004 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.4e-07 60.8 190 25.3
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 3.1e-07 60.5 135 30.4
Gorai.010G001100 Gossypium raimondii HOM05D000151 ORTHO05D000074 5.4e-07 59.7 310 21.6
Rhsim01G0045800 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.4e-07 59.7 210 26.7
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 9.2e-07 58.9 96 32.3
PSO832G1081 Papaver somniferum HOM05D003035 ORTHO05D000440 9.2e-07 58.9 122 30.3
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.2e-07 58.9 219 25.6
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.6e-06 58.2 160 26.9
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 2.7e-06 57.4 219 25.6
Lj3A74T15 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-06 57.0 232 24.1
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 4.5e-06 56.6 239 22.2
Solyc09g007220.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.5e-06 56.6 162 25.9
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.9e-06 56.2 187 23.5


User provided reference genes

Program Settings