Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0006924 Lotus japonicus HOM05D018543 ORTHO05D013489 2.0e-42 175.3 81 100.0
Lj5g0010546 Lotus japonicus HOM05D018543 ORTHO05D013489 2.0e-42 175.3 81 100.0
Lj6g0009622 Lotus japonicus HOM05D018543 ORTHO05D013489 2.0e-42 175.3 81 100.0
Lj6g0012831 Lotus japonicus HOM05D018543 ORTHO05D013489 2.0e-42 175.3 81 100.0
LjContig00006g0002090 Lotus japonicus HOM05D018543 ORTHO05D013489 2.0e-42 175.3 81 100.0
Medtr0052s0140 Medicago truncatula HOM05D003742 ORTHO05D003742 2.2e-33 145.2 77 90.9
A05p22120 Brassica napus HOM05D018543 ORTHO05D013489 1.4e-24 115.9 78 75.6
arahy.Tifrunner.gnm1.ann1.GR42S7 Arachis hypogaea HOM05D000099 ORTHO05D013489 3.0e-22 108.2 63 84.1
Lj5g0026620 Lotus japonicus HOM05D000099 ORTHO05D000205 6.6e-22 107.1 50 98.0
arahy.Tifrunner.gnm1.ann1.IRG5VS Arachis hypogaea HOM05D000099 ORTHO05D013489 8.6e-22 106.7 63 84.1
Sc14g0003710 Simmondsia chinensis HOM05D000099 ORTHO05D000205 1.5e-21 105.9 50 98.0
Phvul.L001655 Phaseolus vulgaris HOM05D000099 ORTHO05D001070 1.6e-20 102.4 83 61.4
Medtr0021s0160 Medicago truncatula HOM05D001819 ORTHO05D001730 5.8e-18 94.0 55 81.8
unitig_152.g31969 Utricularia gibba HOM05D000099 ORTHO05D001070 2.9e-17 91.7 53 81.1
Lj6g0009700 Lotus japonicus HOM05D000099 ORTHO05D002060 4.1e-16 87.8 52 82.7
arahy.Tifrunner.gnm1.ann1.5RJ9GW Arachis hypogaea HOM05D000099 ORTHO05D002060 1.6e-15 85.9 74 59.5
unitig_680.g33582 Utricularia gibba HOM05D000099 ORTHO05D001070 2.7e-15 85.1 42 92.9
unitig_547.g33739 Utricularia gibba HOM05D000099 ORTHO05D001070 3.9e-14 81.3 40 95.0
LjContig00371g0016194 Lotus japonicus HOM05D000099 ORTHO05D000205 1.4e-11 72.8 48 72.9
arahy.Tifrunner.gnm1.ann1.1C667K Arachis hypogaea HOM05D000099 ORTHO05D002060 1.8e-11 72.4 43 81.4
arahy.Tifrunner.gnm1.ann1.739RPY Arachis hypogaea HOM05D000099 ORTHO05D002060 1.8e-11 72.4 43 81.4
arahy.Tifrunner.gnm1.ann1.ELA14Y Arachis hypogaea HOM05D000099 ORTHO05D010992 1.8e-11 72.4 43 81.4
arahy.Tifrunner.gnm1.ann1.FAAV28 Arachis hypogaea HOM05D000099 ORTHO05D002060 1.8e-11 72.4 43 81.4
arahy.Tifrunner.gnm1.ann1.I39KNR Arachis hypogaea HOM05D000099 ORTHO05D002060 1.8e-11 72.4 43 81.4
arahy.Tifrunner.gnm1.ann1.I66GUF Arachis hypogaea HOM05D000099 ORTHO05D000205 1.8e-11 72.4 43 81.4
Lj5g0002401 Lotus japonicus HOM05D000099 ORTHO05D000205 1.8e-11 72.4 78 46.2
Oeu021675.1 Olea europaea HOM05D000099 ORTHO05D002060 4.0e-11 71.2 44 79.5
arahy.Tifrunner.gnm1.ann1.BH9QW3 Arachis hypogaea HOM05D000099 ORTHO05D000205 5.2e-11 70.9 43 79.1
arahy.Tifrunner.gnm1.ann1.R25D28 Arachis hypogaea HOM05D000099 ORTHO05D002060 5.2e-11 70.9 43 79.1
arahy.Tifrunner.gnm1.ann1.UAR2GI Arachis hypogaea HOM05D000099 ORTHO05D002060 5.2e-11 70.9 43 79.1
Sed0006145 Sechium edule HOM05D001819 ORTHO05D001730 5.2e-11 70.9 58 62.1
arahy.Tifrunner.gnm1.ann1.4ZXH4R Arachis hypogaea HOM05D000099 ORTHO05D002060 2.0e-10 68.9 43 76.7
BcaC06g35650 Brassica carinata HOM05D000099 ORTHO05D000205 2.0e-10 68.9 67 55.2
Medtr0052s0150 Medicago truncatula HOM05D000099 ORTHO05D000205 4.4e-10 67.8 49 69.4
CBR_g57922 Chara braunii HOM05D000003 ORTHO05D000004 1.3e-09 66.2 31 93.5
arahy.Tifrunner.gnm1.ann1.K173KE Arachis hypogaea HOM05D000099 ORTHO05D002060 6.4e-09 63.9 33 87.9
A06p25850 Brassica napus HOM05D000099 ORTHO05D002060 6.4e-09 63.9 29 96.6
CAN.G1948.1 Capsicum annuum HOM05D000099 ORTHO05D013489 1.1e-08 63.2 34 85.3
CAN.G2006.3 Capsicum annuum HOM05D000099 ORTHO05D000205 1.2e-07 59.7 31 87.1
Oeu008744.3 Olea europaea HOM05D000099 ORTHO05D000205 1.6e-07 59.3 34 82.4
arahy.Tifrunner.gnm1.ann1.00Z2SH Arachis hypogaea HOM05D000099 ORTHO05D002060 6.0e-07 57.4 37 78.4
unitig_135.g35491 Utricularia gibba HOM05D000099 ORTHO05D002060 7.8e-07 57.0 49 59.2
A06p25910 Brassica napus HOM05D018543 ORTHO05D013489 1.3e-06 56.2 44 63.6
A06p25880 Brassica napus HOM05D000099 ORTHO05D000205 2.3e-06 55.5 38 68.4
arahy.Tifrunner.gnm1.ann1.15YPMB Arachis hypogaea HOM05D000099 ORTHO05D003742 3.9e-06 54.7 38 68.4
CARHR111700 Cardamine hirsuta HOM05D000099 ORTHO05D000205 6.6e-06 53.9 30 83.3
Cpa.g.sc0.75 Carica papaya HOM05D000099 ORTHO05D001070 6.6e-06 53.9 56 50.0


User provided reference genes

Program Settings