Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 3.0e-96 355.1 174 100.0
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 3.1e-77 292.0 175 83.4
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 5.8e-76 287.7 176 83.5
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 9.3e-74 280.4 175 81.1
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 3.3e-71 271.9 174 79.3
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 1.4e-69 266.5 174 77.0
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 2.0e-68 262.7 171 77.8
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 2.0e-68 262.7 171 77.8
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 4.5e-68 261.5 174 76.4
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 1.0e-67 260.4 174 77.6
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 7.9e-65 250.8 174 73.6
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 3.0e-64 248.8 174 73.6
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 6.7e-64 247.7 175 72.0
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 1.7e-62 243.0 170 72.9
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 7.7e-60 234.2 175 65.7
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 2.9e-59 232.3 177 68.4
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 5.0e-59 231.5 173 67.6
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 7.2e-58 227.6 175 66.3
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 1.6e-57 226.5 174 66.7
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 1.6e-57 226.5 172 65.1
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 1.6e-57 226.5 177 67.2
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 2.1e-57 226.1 175 66.3
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 2.7e-57 225.7 175 68.0
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 2.7e-57 225.7 173 65.9
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 6.1e-57 224.6 177 68.4
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 7.9e-57 224.2 148 75.0
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 7.9e-57 224.2 148 75.0
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.8e-56 223.0 174 66.1
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.8e-56 223.0 171 67.8
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 3.9e-56 221.9 174 67.2
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.1e-55 220.3 187 65.8
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 2.0e-55 219.5 171 64.9
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 4.4e-55 218.4 205 58.0
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 4.4e-55 218.4 167 65.9
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 4.4e-55 218.4 148 71.6
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 5.7e-55 218.0 183 65.0
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 9.7e-55 217.2 177 65.5
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 9.7e-55 217.2 134 76.9
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 4.1e-53 211.8 148 66.9
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 2.6e-52 209.1 126 77.8
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 3.4e-52 208.8 232 50.9
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 5.9e-52 208.0 147 68.7
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 2.2e-51 206.1 176 61.9
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 2.9e-51 205.7 175 62.3
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 5.0e-51 204.9 147 68.0
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 5.0e-51 204.9 147 68.0
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 6.5e-51 204.5 144 69.4
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 6.5e-51 204.5 147 68.0
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 6.5e-51 204.5 147 68.0
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 6.5e-51 204.5 147 68.0
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 6.5e-51 204.5 177 63.3
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 8.5e-51 204.1 167 61.7
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 1.1e-50 203.8 139 69.8
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 1.4e-50 203.4 177 62.1
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 3.2e-50 202.2 167 61.1
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 4.2e-50 201.8 139 69.8
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 9.4e-50 200.7 160 64.4
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 9.4e-50 200.7 137 70.1
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 3.6e-49 198.7 178 62.9
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 1.8e-48 196.4 169 60.9
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 2.3e-48 196.1 125 74.4
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 3.0e-48 195.7 150 66.7
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 3.0e-48 195.7 127 73.2
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 3.9e-48 195.3 123 74.8
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 6.7e-48 194.5 172 59.3
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 8.8e-48 194.1 167 59.9
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.1e-47 193.7 173 59.5
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 3.3e-47 192.2 151 64.9
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 1.7e-46 189.9 123 77.2
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 2.2e-46 189.5 174 56.3
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 3.7e-46 188.7 125 69.6
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 1.1e-45 187.2 169 58.6
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 3.1e-45 185.7 140 65.0
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 5.9e-44 181.4 142 65.5
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 7.7e-44 181.0 120 71.7
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.3e-43 180.3 199 51.8
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 1.3e-43 180.3 149 61.7
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 5.0e-43 178.3 175 57.1
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 3.2e-42 175.6 120 69.2
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 4.2e-42 175.3 126 65.9
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 1.2e-41 173.7 120 69.2
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 2.3e-40 169.5 120 67.5
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 7.5e-39 164.5 121 60.3
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.3e-38 163.7 127 64.6
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 1.8e-37 159.8 137 60.6
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 2.4e-37 159.5 122 65.6
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 7.7e-36 154.5 174 48.9
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 4.2e-34 148.7 92 76.1
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 4.2e-34 148.7 125 60.0
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 1.8e-32 143.3 121 62.8
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 3.0e-32 142.5 125 57.6
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 2.8e-30 136.0 169 48.5
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 3.7e-30 135.6 98 65.3
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 2.7e-28 129.4 125 56.8
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 4.9e-22 108.6 160 44.4
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.4e-21 107.1 89 60.7
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 5.9e-20 101.7 89 56.2
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 5.6e-18 95.1 125 40.8
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.8e-16 90.1 85 60.0
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 9.8e-15 84.3 124 42.7
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 1.7e-14 83.6 50 80.0
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 6.4e-14 81.6 127 37.0
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 4.6e-12 75.5 85 52.9
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 7.8e-12 74.7 166 31.9
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.0e-11 74.3 44 79.5
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 8.6e-11 71.2 119 33.6
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 9.5e-10 67.8 77 45.5
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 5.2e-08 62.0 41 70.7
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 2.6e-07 59.7 127 32.3
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 1.3e-06 57.4 134 29.9
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 3.7e-06 55.8 123 33.3
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 4.9e-06 55.5 113 38.1
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 8.3e-06 54.7 135 29.6


User provided reference genes

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