Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 4.5e-250 867.5 443 100.0
Lj1g0012311 Lotus japonicus HOM05D009670 ORTHO05D010890 3.5e-194 681.8 435 82.1
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 2.1e-114 416.8 464 58.4
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 2.1e-114 416.8 464 58.4
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 8.9e-113 411.4 453 57.0
Medtr2g015330 Medicago truncatula HOM05D009670 ORTHO05D010890 1.1e-107 394.4 449 55.9
Phvul.006G178900 Phaseolus vulgaris HOM05D009670 ORTHO05D010890 2.7e-101 373.2 443 54.4
VMungo0540G1521 Vigna mungo HOM05D009670 ORTHO05D010890 2.5e-99 366.7 442 53.6
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 1.2e-93 347.8 463 49.7
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 3.9e-92 342.8 463 49.5
Psat1g200600 Pisum sativum HOM05D009670 ORTHO05D010890 3.7e-82 309.7 447 48.8
Lalb_Chr18g0059231 Lupinus albus HOM05D009670 ORTHO05D010890 1.9e-75 287.3 437 46.9
TPR.G11728 Trifolium pratense HOM05D009670 ORTHO05D010890 1.3e-74 284.6 305 56.1
Medtr4g048110 Medicago truncatula HOM05D009670 ORTHO05D010890 1.0e-68 265.0 460 44.3
Lalb_Chr15g0089411 Lupinus albus HOM05D009670 ORTHO05D010890 2.8e-66 256.9 440 44.8
Lalb_Chr20g0121361 Lupinus albus HOM05D009670 ORTHO05D010890 3.6e-61 240.0 443 43.6
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 3.3e-22 110.5 422 31.0
Psat1g200480 Pisum sativum HOM05D009670 ORTHO05D010890 2.8e-21 107.5 431 30.2
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 2.0e-19 101.3 397 33.0
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 3.7e-18 97.1 474 31.4
TPR.G39306 Trifolium pratense HOM05D009670 ORTHO05D010890 8.3e-18 95.9 89 56.2
TPR.G39843 Trifolium pratense HOM05D009670 ORTHO05D010890 5.4e-17 93.2 89 55.1
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 7.0e-17 92.8 429 30.5
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 1.0e-15 89.0 326 32.5
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 1.6e-13 81.6 389 28.8
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 2.8e-13 80.9 367 30.8
arahy.Tifrunner.gnm1.ann1.6KS8DY Arachis hypogaea HOM05D009670 ORTHO05D010890 4.7e-13 80.1 81 56.8
Atru.chr10.1733 Acer truncatum HOM05D009670 ORTHO05D010890 1.3e-10 72.0 265 33.2
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 1.7e-10 71.6 452 28.1
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.2e-10 71.2 304 31.2
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 3.7e-10 70.5 419 27.4
Psat1g200520 Pisum sativum HOM05D009670 ORTHO05D010890 1.1e-09 68.9 430 25.3
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.2e-08 65.5 412 29.1
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 2.7e-08 64.3 413 27.1
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 6.0e-08 63.2 417 29.5
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 7.8e-08 62.8 392 28.8
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.0e-07 62.4 451 27.9
TPR.G11749 Trifolium pratense HOM05D009670 ORTHO05D010890 1.7e-07 61.6 120 55.8
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.3e-07 61.2 466 26.8
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.0e-07 60.8 434 26.7
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 6.6e-07 59.7 276 28.6
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 8.6e-07 59.3 430 27.7
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 8.6e-07 59.3 446 24.0
Cfa000566 Carpinus fangiana HOM05D038757 ORTHO05D010890 1.9e-06 58.2 340 28.8
Psat1g200440 Pisum sativum HOM05D009670 ORTHO05D010890 4.3e-06 57.0 187 35.8
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 9.5e-06 55.8 436 24.5


User provided reference genes

Program Settings