Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 2.6e-115 418.7 206 100.0
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 2.3e-47 193.0 194 58.8
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 6.7e-47 191.4 191 57.1
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 2.8e-45 186.0 202 51.5
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 6.3e-45 184.9 173 57.8
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 1.2e-43 180.6 204 52.5
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 2.7e-43 179.5 206 50.5
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 3.5e-43 179.1 184 56.0
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 8.8e-39 164.5 205 48.3
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 5.0e-34 148.7 175 49.7
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 8.6e-34 147.9 175 50.3
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.7e-32 142.1 186 45.7
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 6.1e-32 141.7 186 45.7
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 4.0e-31 139.0 170 45.3
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 6.8e-31 138.3 199 41.7
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 6.8e-31 138.3 193 44.0
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.9e-31 137.9 188 45.7
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.5e-30 137.1 193 47.2
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.0e-30 136.7 188 42.6
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 2.6e-30 136.3 179 45.8
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 7.5e-30 134.8 193 46.6
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 2.8e-29 132.9 201 41.3
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 3.7e-29 132.5 174 47.7
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 8.3e-29 131.3 190 44.2
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.1e-28 131.0 192 42.7
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 1.8e-28 130.2 189 47.1
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.4e-28 128.6 197 44.7
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 5.4e-28 128.6 178 46.1
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 9.2e-28 127.9 170 44.7
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.2e-27 127.5 171 43.9
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.6e-27 127.1 186 41.9
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 4.5e-27 125.6 198 40.9
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.5e-27 125.6 189 44.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.0e-26 124.4 195 43.6
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.3e-26 124.0 190 40.5
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.3e-26 124.0 194 40.7
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 2.9e-26 122.9 189 42.9
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 3.8e-26 122.5 184 40.2
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 3.8e-26 122.5 184 43.5
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 3.8e-26 122.5 192 39.6
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 5.0e-26 122.1 183 39.3
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 6.6e-26 121.7 184 40.8
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 6.6e-26 121.7 185 43.8
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 8.6e-26 121.3 187 42.2
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 1.1e-25 120.9 184 40.8
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 1.1e-25 120.9 184 40.8
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 1.5e-25 120.6 189 42.3
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.5e-25 120.6 199 39.7
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.9e-25 120.2 184 40.2
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.9e-25 120.2 184 40.2
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.9e-25 120.2 184 40.2
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.9e-25 120.2 201 42.3
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 2.5e-25 119.8 194 39.7
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 4.3e-25 119.0 189 39.7
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 5.6e-25 118.6 190 40.5
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 5.6e-25 118.6 182 45.1
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.3e-25 118.2 189 39.7
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 7.3e-25 118.2 187 42.8
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 1.2e-24 117.5 194 40.7
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 2.1e-24 116.7 185 38.4
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.1e-24 116.7 206 36.4
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 2.1e-24 116.7 182 44.5
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 1.0e-23 114.4 176 40.3
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.4e-23 114.0 187 40.6
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 1.4e-23 114.0 192 39.1
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.8e-23 113.6 196 40.3
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 2.3e-23 113.2 184 39.1
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 3.0e-23 112.8 185 37.3
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 3.0e-23 112.8 185 37.3
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 3.0e-23 112.8 173 41.0
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 3.0e-23 112.8 201 36.3
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.0e-23 112.8 202 37.1
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 4.0e-23 112.5 187 37.4
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 5.2e-23 112.1 187 39.0
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 5.2e-23 112.1 196 42.9
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 6.8e-23 111.7 181 42.5
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 8.9e-23 111.3 187 39.0
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 8.9e-23 111.3 188 39.4
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.0e-22 110.2 212 34.9
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.6e-22 109.8 185 38.4
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.4e-22 109.4 196 39.3
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.4e-22 109.0 196 38.8
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 5.8e-22 108.6 186 39.2
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 9.8e-22 107.8 187 38.0
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 9.8e-22 107.8 187 38.0
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.3e-21 107.5 192 39.1
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 2.2e-21 106.7 178 41.0
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 2.9e-21 106.3 203 37.4
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 8.3e-21 104.8 213 33.8
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.4e-20 104.0 202 39.6
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.4e-20 104.0 202 35.1
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.4e-20 104.0 179 39.1
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.8e-20 103.6 200 37.5
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.4e-20 103.2 169 40.2
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.4e-20 103.2 181 39.2
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.4e-20 103.2 191 40.3
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 4.1e-20 102.4 203 34.0
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 7.0e-20 101.7 199 39.7
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 7.0e-20 101.7 202 39.1
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 9.2e-20 101.3 176 39.8
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 9.2e-20 101.3 185 36.2
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 9.2e-20 101.3 195 36.9
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.2e-19 100.9 212 35.4
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.6e-19 100.5 200 35.5
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 6.0e-19 98.6 203 37.4
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 6.0e-19 98.6 181 38.1
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.3e-18 97.4 221 33.9
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 3.0e-18 96.3 182 39.6
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 1.5e-17 94.0 194 37.1
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 1.5e-17 94.0 180 38.9
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 9.5e-17 91.3 209 33.5
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 2.1e-16 90.1 201 34.3
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 3.6e-16 89.4 213 31.5
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 3.6e-16 89.4 203 36.9
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 6.2e-16 88.6 188 37.8
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.2e-15 85.5 195 34.9
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.7e-13 80.5 191 34.0
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.9e-13 79.7 217 30.4
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 1.4e-12 77.4 183 32.2
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 3.2e-12 76.3 98 45.9
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.2e-11 74.3 187 31.6
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.6e-08 62.8 183 29.5
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 4.0e-07 59.3 74 45.9
DCAR_011924 Daucus carota HOM05D005897 ORTHO05D007128 5.2e-07 58.9 175 31.4
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 5.2e-07 58.9 186 29.0
DCAR_005065 Daucus carota HOM05D005897 ORTHO05D007128 3.4e-06 56.2 185 30.3


User provided reference genes

Program Settings