Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 2.2e-93 345.5 161 100.0
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.6e-83 311.2 161 88.8
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 5.6e-81 304.3 161 87.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 9.5e-81 303.5 161 87.6
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-79 300.1 161 86.3
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-79 300.1 161 86.3
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 3.4e-78 295.0 161 84.5
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 7.5e-78 293.9 161 83.9
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.2e-77 292.4 162 82.7
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.9e-77 292.0 161 81.4
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 3.7e-77 291.6 160 81.2
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 4.9e-77 291.2 160 85.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 6.4e-77 290.8 161 82.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.1e-76 290.0 160 80.6
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.1e-76 288.1 161 82.6
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.1e-75 285.8 160 81.9
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 82.0
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 79.5
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.3e-74 282.3 155 83.2
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.3e-74 282.3 155 83.2
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.3e-74 282.3 155 83.2
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.0e-74 282.0 158 81.0
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.0e-74 282.0 153 83.7
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 3.0e-74 282.0 156 82.7
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 5.1e-74 281.2 152 84.9
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 158 80.4
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 80.1
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 78.9
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 5.6e-73 277.7 156 80.1
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 79.5
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.5e-73 276.9 158 79.7
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 9.5e-73 276.9 154 81.8
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 77.6
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.1e-72 275.8 161 77.6
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.1e-72 275.8 162 79.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.1e-72 275.8 161 78.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 6.2e-72 274.2 158 77.8
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 77.6
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.8e-71 272.7 161 76.4
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.8e-71 272.7 158 78.5
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.8e-71 272.7 158 77.2
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.8e-71 272.7 156 78.2
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.8e-71 272.7 158 77.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.4e-71 272.3 159 78.6
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 2.4e-71 272.3 159 78.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.1e-71 271.9 158 76.6
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 4.0e-71 271.6 158 77.8
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 6.8e-71 270.8 154 79.2
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 8.9e-71 270.4 159 78.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.2e-70 270.0 151 82.1
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.5e-70 269.6 152 80.3
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.5e-70 269.6 162 76.5
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 2.0e-70 269.2 161 75.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 2.0e-70 269.2 161 75.2
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 2.0e-70 269.2 154 79.9
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.6e-70 268.9 160 76.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 7.6e-70 267.3 158 75.3
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 7.6e-70 267.3 154 80.5
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 75.2
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.3e-69 266.5 155 76.8
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.7e-69 266.2 161 74.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.2e-69 265.8 161 74.5
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 73.9
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.9e-69 265.4 152 77.6
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 2.9e-69 265.4 155 76.8
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.8e-69 265.0 156 76.9
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 6.4e-69 264.2 152 77.0
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 6.4e-69 264.2 161 73.9
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.1e-68 263.5 161 73.3
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 73.9
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.4e-68 262.3 161 77.0
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.4e-68 262.3 161 72.7
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 3.2e-68 261.9 154 76.6
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.2e-68 261.9 156 76.9
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 5.4e-68 261.2 161 73.9
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.1e-68 260.8 156 74.4
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 2.1e-67 259.2 161 73.3
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 2.1e-67 259.2 162 75.3
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 3.5e-67 258.5 169 71.6
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 4.6e-67 258.1 158 74.7
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 4.6e-67 258.1 156 76.9
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 7.8e-67 257.3 162 73.5
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.0e-66 256.9 166 71.7
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.9e-66 255.0 153 75.2
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 5.1e-66 254.6 160 75.0
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.5e-65 253.1 152 75.7
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.3e-65 251.5 153 73.9
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 1.2e-64 250.0 162 72.2
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.1e-64 249.2 147 79.6
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 3.6e-64 248.4 161 75.2
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 3.6e-64 248.4 159 72.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.6e-64 248.4 158 71.5
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.7e-64 248.1 207 58.0
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 6.9e-63 244.2 135 80.7
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 4.4e-62 241.5 144 73.6
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 7.6e-62 240.7 158 71.5
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.7e-61 239.6 157 70.1
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.4e-60 236.5 135 79.3
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 9.3e-60 233.8 135 77.0
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 9.3e-60 233.8 139 77.0
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.7e-59 232.3 135 77.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.5e-57 225.7 135 77.8
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 3.3e-57 225.3 116 87.1
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.3e-56 223.4 152 71.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 3.1e-55 218.8 121 81.0
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 6.4e-53 211.1 183 57.9
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 9.3e-52 207.2 116 80.2
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.5e-51 205.3 155 65.8
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 8.7e-50 200.7 142 61.3
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 7.4e-49 197.6 116 77.6
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 7.4e-49 197.6 142 60.6
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 7.4e-49 197.6 114 78.1
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 9.6e-49 197.2 145 58.6
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-48 196.8 115 79.1
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 2.0e-46 189.5 114 75.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.4e-46 188.7 158 59.5
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 7.1e-44 181.0 132 62.9
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 8.7e-42 174.1 96 78.1
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.3e-41 171.8 95 81.1
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.5e-38 161.8 102 68.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.9e-37 158.3 139 58.3
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.3e-36 154.1 85 82.4
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.0e-34 150.6 132 55.3
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.9e-34 148.7 154 53.9
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 4.3e-33 145.2 86 76.7
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 3.0e-26 122.5 73 78.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 6.1e-19 98.2 57 75.4
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.5e-12 76.3 60 60.0


User provided reference genes

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