Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 1.0e-66 256.9 165 100.0
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 6.9e-26 121.3 111 62.2
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 5.8e-25 118.2 116 60.3
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.9e-23 113.2 116 54.3
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.4e-23 112.8 123 60.2
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 7.9e-22 107.8 98 61.2
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 1.6e-19 100.1 113 54.0
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.6e-19 100.1 117 48.7
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 2.8e-19 99.4 116 53.4
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.1e-18 97.4 116 56.0
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.4e-18 96.3 116 50.9
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 6.9e-18 94.7 119 52.9
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.6e-17 92.8 111 54.1
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 1.7e-16 90.1 126 51.6
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 2.2e-16 89.7 116 49.1
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 2.2e-16 89.7 153 38.6
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.1e-15 87.4 120 46.7
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 1.4e-15 87.0 107 43.9
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.4e-15 86.3 111 50.5
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 2.1e-14 83.2 115 45.2
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.5e-14 82.4 121 47.9
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 3.0e-13 79.3 136 42.6
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 5.1e-13 78.6 138 42.0
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 8.7e-13 77.8 104 47.1
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 8.7e-13 77.8 114 43.9
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.5e-12 76.3 125 44.0
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 9.6e-12 74.3 109 42.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 9.6e-12 74.3 119 39.5
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 2.8e-11 72.8 119 40.3
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 6.2e-11 71.6 116 40.5
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.1e-10 70.9 118 40.7
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.1e-10 70.9 112 42.0
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.4e-10 69.7 108 40.7
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.2e-09 67.4 114 39.5
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.2e-09 67.4 95 44.2
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 2.0e-09 66.6 110 36.4
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.6e-09 66.2 116 38.8
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.5e-09 65.5 97 47.4
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 4.5e-09 65.5 119 42.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 7.6e-09 64.7 103 44.7
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 7.6e-09 64.7 107 37.4
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.0e-08 64.3 122 39.3
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 1.3e-08 63.9 101 41.6
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.3e-08 63.9 115 37.4
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.9e-08 62.8 132 38.6
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.9e-08 62.8 114 43.9
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.8e-08 62.4 114 43.0
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.9e-08 62.0 95 42.1
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 4.9e-08 62.0 116 39.7
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 6.5e-08 61.6 108 38.0
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-07 60.8 126 38.9
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.4e-07 60.5 113 37.2
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.4e-07 60.5 126 37.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.9e-07 60.1 126 38.1
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.5e-07 59.7 114 43.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.2e-07 59.3 126 38.1
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 3.2e-07 59.3 110 36.4
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 4.2e-07 58.9 111 38.7
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 5.5e-07 58.5 95 47.4
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 7.1e-07 58.2 111 43.2
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 7.1e-07 58.2 121 40.5
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 9.3e-07 57.8 125 32.8
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.2e-06 57.4 97 38.1
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.2e-06 57.4 118 37.3
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 1.6e-06 57.0 99 35.4
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 2.1e-06 56.6 115 35.7
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 2.1e-06 56.6 108 36.1
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 6.0e-06 55.1 119 40.3


User provided reference genes

Program Settings