Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0008347 Lotus japonicus HOM05D001051 ORTHO05D000886 3.2e-98 361.7 177 100.0
Lj1g0011265 Lotus japonicus HOM05D001051 ORTHO05D000886 1.1e-21 107.5 58 93.1
Lj3g0027323 Lotus japonicus HOM05D024106 ORTHO05D002376 3.2e-21 105.9 54 96.3
Lj4g0015701 Lotus japonicus HOM05D001051 ORTHO05D000886 7.9e-20 101.3 63 82.5
Lalb_Chr13g0300401 Lupinus albus HOM05D001051 ORTHO05D000886 2.1e-12 76.6 60 70.0
Phvul.003G149000 Phaseolus vulgaris HOM05D001051 ORTHO05D000886 2.1e-12 76.6 59 69.5
VMungo1215G1382 Vigna mungo HOM05D001051 ORTHO05D000886 2.1e-12 76.6 59 69.5
Glyma.17G066600 Glycine max HOM05D001051 ORTHO05D000886 6.1e-12 75.1 60 71.7
arahy.Tifrunner.gnm1.ann1.GMWG2V Arachis hypogaea HOM05D001051 ORTHO05D000886 3.0e-11 72.8 59 69.5
Ca_21196_v3 Cicer arietinum L. HOM05D001051 ORTHO05D000886 3.9e-11 72.4 62 67.7
Glyma.13G093800 Glycine max HOM05D001051 ORTHO05D000886 5.1e-11 72.0 57 71.9
arahy.Tifrunner.gnm1.ann1.6J3MKV Arachis hypogaea HOM05D001051 ORTHO05D000886 8.7e-11 71.2 59 67.8
TPR.G5295 Trifolium pratense HOM05D001051 ORTHO05D000886 7.4e-10 68.2 60 65.0
Medtr4g128930 Medicago truncatula HOM05D001051 ORTHO05D000886 1.6e-09 67.0 65 61.5
Psat0s1849g0080 Pisum sativum HOM05D001051 ORTHO05D000886 1.6e-09 67.0 64 62.5
ClCG06G013080 Citrullus lanatus HOM05D001051 ORTHO05D000886 2.8e-09 66.2 59 64.4
CsaV3_1G031230 Cucumis sativus L. HOM05D001051 ORTHO05D000886 2.8e-09 66.2 60 60.0
Sed0014320 Sechium edule HOM05D001051 ORTHO05D000886 3.7e-09 65.9 59 59.3
MELO3C017500.2 Cucumis melo HOM05D001051 ORTHO05D000886 6.3e-09 65.1 60 60.0
MD13G1263800 Malus domestica HOM05D001051 ORTHO05D000886 6.3e-09 65.1 59 57.6
MELO3C017501.2 Cucumis melo HOM05D001051 ORTHO05D000886 1.1e-08 64.3 54 63.0
CiPaw.07G188700 Carya illinoinensis HOM05D001051 ORTHO05D000886 1.4e-08 63.9 59 62.7
Sabra18G0082900 Salix brachista HOM05D001051 ORTHO05D000886 1.8e-08 63.5 60 56.7
MD16G1265000 Malus domestica HOM05D001051 ORTHO05D000886 3.1e-08 62.8 50 64.0
Potri.018G096084 Populus trichocarpa HOM05D001051 ORTHO05D000886 3.1e-08 62.8 60 55.0
Sabra06G0133100 Salix brachista HOM05D001051 ORTHO05D000886 3.1e-08 62.8 60 55.0
Lsat_1_v5_gn_5_86540 Lactuca sativa HOM05D001051 ORTHO05D000886 6.9e-08 61.6 57 61.4
Potri.006G173600 Populus trichocarpa HOM05D001051 ORTHO05D000886 6.9e-08 61.6 60 55.0
TWI34G1589 Tripterygium wilfordii HOM05D001051 ORTHO05D000886 6.9e-08 61.6 56 58.9
Haze_22137 Corylus avellana HOM05D001051 ORTHO05D000886 9.0e-08 61.2 51 62.7
Atru.chr7.580 Acer truncatum HOM05D001051 ORTHO05D000886 1.5e-07 60.5 41 73.2
Cfa013529 Carpinus fangiana HOM05D001051 ORTHO05D000886 1.5e-07 60.5 59 61.0
TWI32G0160 Tripterygium wilfordii HOM05D001051 ORTHO05D000886 1.5e-07 60.5 62 54.8
QL02p096683 Quercus lobata HOM05D001051 ORTHO05D000886 2.0e-07 60.1 59 61.0
Ciclev10008366m.g Citrus clementina HOM05D001051 ORTHO05D000886 2.6e-07 59.7 63 58.7
Cpa.g.sc95.76 Carica papaya HOM05D001051 ORTHO05D000886 3.4e-07 59.3 61 57.4
Cc06_g13690 Coffea canephora HOM05D001051 ORTHO05D000886 5.9e-07 58.5 59 57.6
Prupe.1G093900 Prunus persica HOM05D001051 ORTHO05D000886 7.7e-07 58.2 59 59.3
PGR142G2031 Punica granatum HOM05D001051 ORTHO05D000886 7.7e-07 58.2 58 58.6
TWI63G0975 Tripterygium wilfordii HOM05D001051 ORTHO05D000886 7.7e-07 58.2 41 70.7
Sed0016192 Sechium edule HOM05D001051 ORTHO05D000886 1.0e-06 57.8 58 58.6
CANSAT11G0444 Cannabis sativa HOM05D001051 ORTHO05D000886 1.3e-06 57.4 59 52.5
CDE02G3092 Ceratophyllum demersum HOM05D001051 ORTHO05D000886 1.7e-06 57.0 41 70.7
EL10Ac2g02435 Beta vulgaris HOM05D001051 ORTHO05D000886 2.9e-06 56.2 51 58.8
AUR62020307 Chenopodium quinoa HOM05D001051 ORTHO05D000886 2.9e-06 56.2 51 58.8
AUR62035217 Chenopodium quinoa HOM05D001051 ORTHO05D000886 2.9e-06 56.2 51 58.8
HanXRQChr12g0358091 Helianthus annuus HOM05D001051 ORTHO05D000886 2.9e-06 56.2 60 53.3
Lj7A741T44 Lonicera japonica HOM05D001051 ORTHO05D000886 2.9e-06 56.2 51 60.8
MBI14_g37766_MAGBIO Magnolia biondii HOM05D001051 ORTHO05D000886 2.9e-06 56.2 50 60.0
Manes.06G028200 Manihot esculenta HOM05D001051 ORTHO05D000886 2.9e-06 56.2 58 53.4
PSO017G4361 Papaver somniferum HOM05D001051 ORTHO05D000886 2.9e-06 56.2 63 52.4
PSO170G4465 Papaver somniferum HOM05D001051 ORTHO05D000886 2.9e-06 56.2 63 52.4
Thecc.09G165200 Theobroma cacao HOM05D001051 ORTHO05D000886 2.9e-06 56.2 41 68.3
Aqoxy7G03177 Aquilegia oxysepala HOM05D001051 ORTHO05D000886 3.8e-06 55.8 41 68.3
PGR102G0687 Punica granatum HOM05D001051 ORTHO05D000886 3.8e-06 55.8 64 51.6
TAR625G1493 Trochodendron aralioides HOM05D001051 ORTHO05D000886 3.8e-06 55.8 56 57.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 5.0e-06 55.5 40 70.0
Dinv23726 Davidia involucrata HOM05D001051 ORTHO05D000886 5.0e-06 55.5 57 52.6
Dinv42762 Davidia involucrata HOM05D001051 ORTHO05D000886 5.0e-06 55.5 41 68.3
Dinv43340 Davidia involucrata HOM05D001051 ORTHO05D000886 5.0e-06 55.5 41 68.3
Gohir.A08G086800 Gossypium hirsutum HOM05D001051 ORTHO05D000886 5.0e-06 55.5 42 66.7
Gohir.D08G096200 Gossypium hirsutum HOM05D001051 ORTHO05D000886 5.0e-06 55.5 42 66.7
Gorai.004G102000 Gossypium raimondii HOM05D001051 ORTHO05D000886 5.0e-06 55.5 42 66.7
HPP92_018522 Vanilla planifolia HOM05D001051 ORTHO05D000886 5.0e-06 55.5 56 58.9
Dinv41284 Davidia involucrata HOM05D001051 ORTHO05D000886 6.5e-06 55.1 59 55.9
ECA238G0983 Erigeron canadensis HOM05D001051 ORTHO05D000886 6.5e-06 55.1 43 67.4
Hma1.2p1_0790F.1_g218430 Hydrangea macrophylla HOM05D001051 ORTHO05D000886 6.5e-06 55.1 58 55.2
MBI16_g00675_MAGBIO Magnolia biondii HOM05D001051 ORTHO05D000886 6.5e-06 55.1 60 53.3
Manes.14G161500 Manihot esculenta HOM05D001051 ORTHO05D000886 6.5e-06 55.1 41 63.4
Nitab4.5_0001212g0030 Nicotiana tabacum HOM05D001051 ORTHO05D000886 6.5e-06 55.1 46 60.9
ClCG07G016220 Citrullus lanatus HOM05D001051 ORTHO05D000886 8.5e-06 54.7 44 63.6
ClCG11G012300 Citrullus lanatus HOM05D001051 ORTHO05D000886 8.5e-06 54.7 43 65.1
MELO3C004050.2 Cucumis melo HOM05D001051 ORTHO05D000886 8.5e-06 54.7 43 65.1
ECA234G3161 Erigeron canadensis HOM05D001051 ORTHO05D000886 8.5e-06 54.7 53 56.6
FAN07G2068 Fragaria x ananassa HOM05D001051 ORTHO05D000886 8.5e-06 54.7 41 65.9
FAN22G1203 Fragaria x ananassa HOM05D001051 ORTHO05D000886 8.5e-06 54.7 41 65.9
Lj9A690T27 Lonicera japonica HOM05D001051 ORTHO05D000886 8.5e-06 54.7 40 67.5
Lj9A735T61 Lonicera japonica HOM05D001051 ORTHO05D000886 8.5e-06 54.7 40 67.5
MD15G1045000 Malus domestica HOM05D001051 ORTHO05D000886 8.5e-06 54.7 42 66.7


User provided reference genes

Program Settings