Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 5.2e-37 157.1 76 100.0
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 4.3e-15 84.3 79 58.2
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 1.1e-13 79.7 71 60.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 4.0e-13 77.8 76 52.6
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 4.0e-13 77.8 79 54.4
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.5e-12 75.9 77 45.5
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 7.6e-12 73.6 76 55.3
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.3e-11 72.8 81 49.4
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 1.3e-11 72.8 77 49.4
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.7e-11 72.4 80 48.8
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.7e-11 72.4 71 53.5
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.2e-11 72.0 80 48.8
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 2.9e-11 71.6 80 46.2
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 4.9e-11 70.9 78 47.4
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 8.4e-11 70.1 75 48.0
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 1.1e-10 69.7 81 51.9
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 1.4e-10 69.3 76 52.6
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 3.2e-10 68.2 79 45.6
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 7.1e-10 67.0 58 53.4
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 1.2e-09 66.2 77 53.2
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 1.6e-09 65.9 75 48.0
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.6e-09 65.9 79 44.3
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.6e-09 65.9 76 48.7
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.6e-09 65.9 86 45.3
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 2.1e-09 65.5 71 47.9
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 2.1e-09 65.5 79 43.0
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 2.7e-09 65.1 80 43.8
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 6.0e-09 63.9 79 43.0
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 7.8e-09 63.5 79 43.0
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 7.8e-09 63.5 79 45.6
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 7.8e-09 63.5 78 41.0
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 1.7e-08 62.4 82 54.9
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 2.3e-08 62.0 77 45.5
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 2.3e-08 62.0 81 54.3
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 2.3e-08 62.0 79 43.0
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.3e-08 62.0 78 43.6
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.3e-08 62.0 78 43.6
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 3.0e-08 61.6 75 41.3
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.0e-08 61.6 78 39.7
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 3.9e-08 61.2 78 43.6
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 6.6e-08 60.5 75 45.3
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 6.6e-08 60.5 74 45.9
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.5e-07 59.3 80 42.5
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 1.5e-07 59.3 81 43.2
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 1.9e-07 58.9 74 45.9
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 1.9e-07 58.9 75 46.7
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.5e-07 58.5 80 42.5
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 3.3e-07 58.2 80 42.5
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 4.3e-07 57.8 81 45.7
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 5.6e-07 57.4 74 44.6
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 7.3e-07 57.0 74 44.6
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 7.3e-07 57.0 77 41.6
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 2.8e-06 55.1 71 47.9
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 2.8e-06 55.1 77 45.5
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 3.6e-06 54.7 80 42.5
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.6e-06 54.7 77 40.3
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 3.6e-06 54.7 71 46.5
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 4.7e-06 54.3 73 42.5
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 6.2e-06 53.9 73 42.5
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 6.2e-06 53.9 81 43.2
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 6.2e-06 53.9 81 39.5
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 8.1e-06 53.5 81 40.7


User provided reference genes

Program Settings