Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.5e-40 169.1 146 100.0
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 2.1e-26 122.9 146 81.5
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.5e-24 116.7 131 87.8
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 9.7e-24 114.0 148 83.1
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 7.7e-21 104.4 148 70.3
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 1.3e-20 103.6 144 79.9
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 8.5e-20 100.9 141 80.9
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 8.5e-20 100.9 131 84.0
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.6e-18 96.7 148 80.4
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 2.7e-18 95.9 148 81.1
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 3.6e-18 95.5 151 67.5
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 3.6e-18 95.5 151 67.5
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 3.0e-17 92.4 150 70.0
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 3.0e-17 92.4 150 70.0
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 6.7e-17 91.3 145 45.5
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 6.7e-17 91.3 145 70.3
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 3.3e-16 89.0 146 75.3
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 5.7e-16 88.2 154 68.8
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 6.3e-15 84.7 145 66.9
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 8.2e-15 84.3 150 65.3
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.4e-14 83.6 150 73.3
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.4e-14 83.6 150 70.7
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.4e-14 83.6 150 70.7
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.4e-14 83.6 133 74.4
arahy.Tifrunner.gnm1.ann1.XR1IK3 Arachis hypogaea HOM05D006719 ORTHO05D007063 3.1e-14 82.4 147 71.4
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.1e-14 82.0 139 70.5
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 4.1e-14 82.0 148 67.6
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.3e-14 81.6 148 67.6
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 5.3e-14 81.6 148 70.9
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 5.3e-14 81.6 126 67.5
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 9.1e-14 80.9 151 66.9
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.6e-13 80.1 127 77.2
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.6e-13 80.1 150 68.7
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 2.0e-13 79.7 140 70.0
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 3.5e-13 79.0 131 66.4
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 4.5e-13 78.6 156 60.9
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 4.5e-13 78.6 140 72.1
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 5.9e-13 78.2 140 72.9
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 5.9e-13 78.2 145 62.1
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 5.9e-13 78.2 142 71.8
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 2.2e-12 76.3 153 69.3
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 2.9e-12 75.9 151 68.9
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 5.0e-12 75.1 145 64.1
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 8.5e-12 74.3 152 70.4
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 1.1e-11 73.9 129 69.8
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.5e-11 73.6 117 73.5
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 5.5e-11 71.6 131 61.8
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 5.5e-11 71.6 150 40.0
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 5.5e-11 71.6 122 73.8
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.5e-11 71.6 147 67.3
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.5e-11 71.6 128 62.5
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 5.5e-11 71.6 148 68.2
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 5.5e-11 71.6 125 71.2
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 9.4e-11 70.9 155 63.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 1.2e-10 70.5 131 71.8
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.6e-10 70.1 156 64.1
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.6e-10 70.1 156 62.8
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 2.1e-10 69.7 128 70.3
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 3.6e-10 68.9 152 65.8
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 4.7e-10 68.6 142 38.0
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 6.1e-10 68.2 152 63.2
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 6.1e-10 68.2 147 67.3
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.4e-09 67.0 144 57.6
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-09 66.6 135 68.1
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 3.0e-09 65.9 148 65.5
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.0e-09 65.5 110 70.9
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 6.7e-09 64.7 140 67.9
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 6.7e-09 64.7 110 68.2
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.6e-08 62.8 127 71.7
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 3.3e-08 62.4 149 62.4
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.4e-08 62.0 144 70.8
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.7e-08 61.6 151 34.4
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 9.7e-08 60.8 152 67.1
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.7e-07 60.1 118 63.6
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 2.2e-07 59.7 152 66.4
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 2.2e-07 59.7 152 67.1
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 2.2e-07 59.7 141 63.1
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.8e-07 59.3 156 59.0
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.8e-07 59.3 137 56.2
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 3.7e-07 58.9 95 70.5
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.1e-06 57.4 156 33.3
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 1.1e-06 57.4 51 60.8
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 1.1e-06 57.4 123 69.1
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 1.1e-06 57.4 47 66.0
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 1.4e-06 57.0 150 67.3
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 2.4e-06 56.2 141 63.8
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 3.1e-06 55.8 133 63.2
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 4.1e-06 55.5 178 46.6
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 5.3e-06 55.1 131 65.6
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 7.0e-06 54.7 133 53.4


User provided reference genes

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