Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 9.0e-262 906.4 453 100.0
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 6.3e-130 468.4 478 58.6
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 4.1e-129 465.7 472 58.9
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.2e-126 456.1 484 55.2
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 4.8e-122 442.2 501 53.9
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 6.3e-122 441.8 492 54.5
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 5.3e-121 438.7 513 52.6
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.2e-120 437.6 483 55.7
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 1.6e-120 437.2 511 53.0
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 5.9e-120 435.3 513 51.7
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.7e-119 433.7 498 53.0
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.0e-119 432.2 499 52.7
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 8.5e-119 431.4 509 52.1
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 9.4e-118 427.9 500 53.6
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 6.1e-117 425.2 519 51.8
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 5.2e-116 422.2 510 51.4
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 8.8e-116 421.4 476 54.6
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 3.7e-114 416.0 489 53.8
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.4e-113 413.3 513 51.5
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 3.1e-113 412.9 515 51.3
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 4.1e-113 412.5 519 51.1
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.7e-111 407.1 503 50.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.7e-111 407.1 495 52.7
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.9e-111 406.4 529 50.3
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 5.0e-111 405.6 496 52.6
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.5e-110 404.1 477 53.9
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 5.5e-110 402.1 498 52.2
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.6e-109 399.4 494 52.2
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.6e-109 399.4 513 51.1
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 4.7e-109 399.1 492 51.6
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 8.0e-109 398.3 494 52.0
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.0e-108 397.9 494 51.8
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.8e-108 397.1 510 50.6
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.0e-108 396.0 491 51.1
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.2e-107 394.4 492 51.2
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 2.6e-107 393.3 488 52.3
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.8e-106 389.8 519 49.7
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 3.7e-106 389.4 511 49.1
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.4e-105 387.5 510 49.8
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 5.0e-103 379.0 510 46.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 5.0e-103 379.0 495 48.3
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.9e-102 377.1 497 51.3
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.6e-101 374.0 505 48.7
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.8e-101 373.2 507 49.7
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 4.7e-101 372.5 466 49.4
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 5.2e-100 369.0 506 49.2
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 9.8e-99 364.8 505 48.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 2.3e-95 353.6 496 47.8
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 5.0e-95 352.4 512 46.3
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 8.6e-95 351.7 498 46.6
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.5e-94 350.1 494 46.4
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.1e-93 347.1 503 46.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.4e-92 344.4 508 47.2
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 3.1e-92 343.2 504 43.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 6.8e-92 342.0 485 47.4
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.2e-91 341.3 516 44.6
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.4e-91 339.7 501 45.1
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.4e-91 339.7 466 47.2
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 2.9e-90 336.7 493 45.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.4e-89 334.3 474 46.6
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.2e-88 331.3 461 48.6
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.6e-88 330.9 496 47.2
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 2.7e-88 330.1 518 43.4
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.1e-86 324.7 470 46.8
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 4.3e-86 322.8 482 44.4
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 5.6e-86 322.4 517 42.7
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 7.3e-86 322.0 518 43.2
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 6.2e-85 318.9 507 43.0
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.8e-84 317.4 496 43.3
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 6.8e-84 315.5 555 41.8
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 1.5e-83 314.3 500 46.0
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 1.5e-83 314.3 500 46.0
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.4e-83 312.8 492 43.3
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 3.7e-82 309.7 388 52.3
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.4e-81 307.8 505 43.4
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 3.2e-81 306.6 500 44.6
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 4.1e-81 306.2 504 44.4
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 6.6e-79 298.9 498 44.4
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 3.4e-75 286.6 486 42.4
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.6e-72 277.7 519 39.1
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 7.8e-72 275.4 431 43.4
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 3.9e-71 273.1 494 40.3
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.5e-70 271.2 401 44.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.6e-69 267.7 491 40.5
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 5.2e-68 262.7 463 42.1
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.5e-67 261.2 470 39.6
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 3.4e-67 260.0 460 41.5
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 3.8e-66 256.5 460 39.8
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 8.4e-66 255.4 508 38.4
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 6.0e-64 249.2 495 38.0
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 7.8e-64 248.8 438 44.1
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.1e-62 245.0 453 40.2
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.2e-59 235.0 412 42.7
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.4e-59 233.4 479 37.2
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 2.9e-58 230.3 501 35.9
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.7e-56 223.8 354 42.7
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.9e-54 217.6 311 44.7
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.9e-49 201.1 503 34.8
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.4e-49 200.7 484 34.3
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 6.7e-47 192.6 218 52.3
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.9e-46 191.0 476 35.3
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 4.8e-45 186.4 248 46.4
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.5e-43 181.4 447 33.3
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.1e-41 175.3 539 31.7
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 6.7e-39 166.0 293 42.0
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.8e-36 157.9 549 29.7
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 3.1e-28 130.6 300 35.0
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 6.9e-28 129.4 546 26.6
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.0e-28 129.0 206 41.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 1.7e-26 124.8 153 46.4
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.0e-19 101.3 86 61.6
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 3.2e-17 94.0 554 24.7
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 3.0e-15 87.4 529 23.6
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 3.8e-10 70.5 60 60.0
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.7e-08 63.5 52 55.8


User provided reference genes

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