Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 1.5e-178 629.4 324 100.0
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 3.2e-136 488.8 329 76.0
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 4.2e-136 488.4 323 75.2
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 6.7e-126 454.5 331 74.0
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 2.8e-124 449.1 327 75.2
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 3.7e-124 448.7 331 72.8
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 6.5e-121 438.0 324 73.1
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.9e-120 436.4 313 73.2
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 1.2e-119 433.7 320 73.4
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 1.6e-119 433.3 327 72.8
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 2.7e-119 432.6 318 73.0
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 3.0e-118 429.1 313 70.0
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 9.7e-117 424.1 314 67.5
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 4.8e-116 421.8 329 71.1
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 4.1e-115 418.7 332 68.7
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 2.7e-111 406.0 330 67.3
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 1.0e-110 404.1 330 67.0
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 7.5e-109 397.9 321 66.7
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 4.1e-107 392.1 303 66.7
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 5.3e-107 391.7 318 67.0
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 6.3e-100 368.2 313 63.6
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 5.4e-99 365.2 313 62.3
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 1.3e-97 360.5 317 59.6
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 2.5e-96 356.3 316 58.2
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 1.6e-95 353.6 213 79.8
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 2.1e-95 353.2 315 60.3
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 2.3e-94 349.7 314 59.2
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 9.8e-93 344.4 317 56.5
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.4e-91 339.7 318 61.0
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 1.2e-90 337.4 311 56.3
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 3.5e-90 335.9 310 55.2
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 4.5e-90 335.5 310 56.1
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 4.5e-90 335.5 310 55.5
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 1.0e-89 334.3 307 55.0
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.7e-89 333.6 310 57.1
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 2.9e-89 332.8 313 55.3
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 2.9e-89 332.8 319 57.7
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 8.6e-89 331.3 314 57.6
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.5e-88 330.5 311 55.0
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 2.5e-88 329.7 313 55.6
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 7.3e-88 328.2 320 55.0
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 9.5e-88 327.8 328 56.4
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 1.2e-87 327.4 321 53.3
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 1.6e-87 327.0 315 57.1
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 2.1e-87 326.6 320 54.7
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 6.1e-87 325.1 311 56.6
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 6.1e-87 325.1 319 59.2
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 8.0e-87 324.7 314 54.5
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 1.0e-86 324.3 310 55.2
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 4.0e-86 322.4 320 53.1
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 4.0e-86 322.4 320 54.7
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.5e-85 320.5 316 58.2
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 4.4e-85 318.9 315 54.6
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.4e-85 318.9 317 53.3
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.3e-84 317.4 317 53.0
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 6.4e-84 315.1 317 56.2
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 8.3e-84 314.7 313 52.7
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.4e-83 313.2 289 56.7
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.2e-83 312.8 318 52.8
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 5.4e-83 312.0 319 52.7
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 5.4e-83 312.0 318 53.5
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 1.6e-82 310.5 317 52.1
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.6e-82 310.5 318 53.8
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.7e-82 309.7 312 57.1
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 7.8e-82 308.1 316 51.6
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 1.3e-81 307.4 318 52.5
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 6.6e-81 305.1 321 51.4
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.5e-80 303.9 316 51.6
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 1.5e-80 303.9 318 52.2
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 1.9e-80 303.5 317 49.2
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 1.9e-80 303.5 325 50.5
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 3.3e-80 302.8 316 49.1
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 4.3e-80 302.4 316 49.4
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 5.6e-80 302.0 316 53.8
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 5.6e-80 302.0 334 50.9
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.6e-79 300.4 307 56.4
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.6e-79 300.4 308 50.6
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 1.6e-79 300.4 318 51.9
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 3.6e-79 299.3 317 47.9
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 4.7e-79 298.9 322 51.6
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 4.7e-79 298.9 317 52.4
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 8.0e-79 298.1 317 53.3
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 1.1e-78 297.7 336 52.7
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 1.4e-78 297.4 308 48.4
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 1.8e-78 297.0 317 47.6
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 2.3e-78 296.6 317 47.9
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 4.0e-78 295.8 317 47.9
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 5.2e-78 295.4 320 50.3
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 6.8e-78 295.0 312 48.4
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 8.9e-78 294.7 252 57.1
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 1.5e-77 293.9 326 48.8
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 1.5e-77 293.9 322 47.8
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 2.0e-77 293.5 310 51.6
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 4.4e-77 292.4 317 47.3
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 4.4e-77 292.4 317 47.3
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 4.4e-77 292.4 368 45.9
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 5.8e-77 292.0 317 51.1
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 7.5e-77 291.6 328 50.0
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 9.8e-77 291.2 320 48.1
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.3e-76 290.8 319 48.6
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 2.2e-76 290.0 317 52.4
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 6.4e-76 288.5 290 55.2
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 8.3e-76 288.1 308 50.3
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-75 287.3 281 54.4
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 3.2e-75 286.2 270 55.9
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 4.1e-75 285.8 226 61.5
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 6.0e-74 282.0 314 49.0
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 1.7e-73 280.4 313 47.9
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 1.1e-72 277.7 308 49.0
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 2.5e-72 276.6 312 47.8
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 2.1e-71 273.5 314 49.7
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 2.1e-71 273.5 314 49.7
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 2.1e-71 273.5 310 46.1
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 3.6e-71 272.7 317 49.5
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 3.6e-71 272.7 317 49.5
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 4.4e-69 265.8 271 52.8
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 9.9e-69 264.6 358 43.6
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.4e-67 260.8 317 49.5
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 7.8e-66 255.0 312 46.5
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 1.7e-65 253.8 329 45.6
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 6.8e-62 241.9 227 64.3
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 8.4e-60 235.0 321 43.0
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 8.7e-57 224.9 313 46.3
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.1e-54 218.0 321 42.1
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 3.1e-54 216.5 181 56.4
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 5.4e-51 205.7 231 51.9
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 7.3e-48 195.3 316 41.5
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 8.1e-47 191.8 308 40.3
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 1.2e-45 188.0 203 49.8
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 4.5e-45 186.0 189 49.7
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.7e-44 184.1 271 41.0
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 3.8e-44 183.0 320 34.1
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.4e-44 182.2 311 39.5
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 6.4e-44 182.2 292 40.8
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 4.6e-42 176.0 324 34.9
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 2.5e-40 170.2 317 34.7
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 3.3e-40 169.9 313 32.3
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 9.3e-35 151.8 264 40.5
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 4.6e-34 149.4 318 36.5
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 6.0e-34 149.1 143 51.7
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.1e-30 136.3 114 61.4
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 5.8e-29 132.5 115 53.9
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.2e-21 108.2 242 37.2
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 1.1e-19 101.7 161 39.8
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.2e-19 100.1 161 49.1
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.1e-18 97.4 78 59.0
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-16 90.1 187 32.1
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 9.7e-16 88.6 124 43.5
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 4.2e-11 73.2 170 33.5
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 6.1e-10 69.3 224 29.0
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 8.8e-09 65.5 106 48.1
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 3.3e-08 63.5 113 36.3
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 5.7e-08 62.8 115 40.0
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 5.7e-08 62.8 92 38.0
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 7.4e-08 62.4 202 28.2
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 3.1e-06 57.0 56 44.6


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