Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 5.6e-129 464.5 281 100.0
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 1.1e-92 344.0 273 74.7
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 7.0e-87 324.7 281 68.7
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 7.0e-87 324.7 281 64.1
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 3.5e-86 322.4 281 68.7
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 1.2e-83 313.9 271 63.1
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 2.3e-82 309.7 280 69.3
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 6.7e-82 308.1 281 64.8
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 4.0e-74 282.3 281 67.3
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 8.3e-72 274.6 282 64.9
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 5.4e-71 271.9 281 56.2
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 9.5e-60 234.6 281 49.5
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 1.2e-57 227.6 250 50.4
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 5.7e-57 225.3 273 48.0
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 9.8e-57 224.6 285 47.4
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 4.9e-56 222.2 253 49.8
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 1.4e-55 220.7 285 44.9
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 3.2e-55 219.5 282 46.1
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 4.1e-55 219.2 288 45.5
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 9.2e-55 218.0 250 48.4
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 9.2e-55 218.0 253 49.4
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 2.0e-54 216.9 245 49.0
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 2.7e-54 216.5 244 48.8
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 5.0e-53 212.2 253 46.6
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 1.5e-52 210.7 269 45.7
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 1.9e-52 210.3 244 57.0
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 3.3e-52 209.5 292 44.9
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 3.6e-51 206.1 281 44.1
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 6.2e-51 205.3 206 53.9
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.8e-50 203.8 285 43.5
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 1.2e-49 201.1 281 43.8
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 2.0e-49 200.3 258 45.0
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 6.4e-48 195.3 285 41.8
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 3.2e-47 193.0 289 40.1
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 2.0e-46 190.3 291 39.2
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 8.6e-45 184.9 263 44.5
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 1.9e-44 183.7 232 46.6
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 1.9e-44 183.7 280 41.4
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 2.1e-43 180.3 255 42.0
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 4.7e-43 179.1 282 42.9
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 6.2e-43 178.7 260 43.8
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 1.8e-42 177.2 286 40.6
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 5.2e-42 175.6 251 42.6
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 4.4e-41 172.6 265 42.6
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 7.5e-41 171.8 175 52.0
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 7.5e-41 171.8 285 38.9
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 7.5e-41 171.8 285 38.9
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 4.9e-40 169.1 276 44.2
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 6.4e-40 168.7 192 45.8
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 4.1e-39 166.0 286 37.8
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 7.1e-39 165.2 215 45.1
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 3.0e-37 159.8 210 45.7
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 6.6e-37 158.7 278 37.4
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 4.3e-36 156.0 280 36.4
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 7.3e-36 155.2 282 36.5
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 2.1e-35 153.7 189 45.5
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 4.7e-35 152.5 290 39.3
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 4.7e-35 152.5 264 37.9
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 6.2e-35 152.1 291 35.1
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 3.1e-34 149.8 253 39.1
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 3.1e-34 149.8 252 38.5
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 5.2e-34 149.1 202 42.1
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 5.2e-34 149.1 202 42.1
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 6.8e-34 148.7 202 41.6
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 6.8e-34 148.7 202 41.6
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 6.8e-34 148.7 262 35.5
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 1.7e-32 144.1 224 39.7
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 3.2e-31 139.8 279 36.6
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 1.6e-30 137.5 196 40.8
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 2.1e-30 137.1 278 34.2
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 2.3e-29 133.7 190 40.0
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 4.3e-28 129.4 274 34.7
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 5.6e-28 129.0 294 34.0
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 9.6e-28 128.3 266 35.0
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 9.6e-28 128.3 261 34.5
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 1.4e-26 124.4 250 34.8
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 3.1e-26 123.2 235 36.6
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 4.0e-26 122.9 161 43.5
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 6.9e-26 122.1 245 36.3
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 2.0e-25 120.6 246 35.0
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.0e-25 120.6 204 38.2
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 1.7e-24 117.5 270 32.2
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 2.2e-24 117.1 252 36.1
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.4e-23 113.6 177 40.1
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 3.5e-22 109.8 149 43.6
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 7.8e-22 108.6 262 30.2
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 3.9e-21 106.3 136 44.1
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 3.9e-21 106.3 252 34.1
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 3.9e-21 106.3 252 34.1
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 3.6e-19 99.8 280 29.3
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.4e-18 97.8 128 41.4
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 2.9e-16 90.1 107 48.6
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 3.2e-15 86.7 112 45.5
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 1.2e-14 84.7 277 27.1
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 2.1e-14 84.0 330 24.8
MELO3C027350.2 Cucumis melo HOM05D007447 ORTHO05D009372 3.0e-13 80.1 93 43.0
AUR62031072 Chenopodium quinoa HOM05D007447 ORTHO05D009372 3.9e-13 79.7 201 31.8
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 1.9e-12 77.4 241 29.5
Gohir.A01G124600 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.3e-11 74.7 68 52.9
Gohir.A01G131222 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.3e-11 74.7 68 52.9
Gohir.A02G158500 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.7e-11 73.2 67 52.2
Zm00001eb203200 Zea mays HOM05D007447 ORTHO05D009372 2.4e-10 70.5 305 24.9
HPP92_005282 Vanilla planifolia HOM05D007447 ORTHO05D009372 4.0e-10 69.7 155 34.2


User provided reference genes

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