Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 8.3e-304 1046.2 513 100.0
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 2.2e-219 765.8 521 76.2
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 1.0e-213 746.9 512 75.2
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.1e-212 743.4 522 74.3
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 7.4e-204 714.1 521 72.2
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 3.5e-201 705.3 522 70.9
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 3.5e-201 705.3 514 71.0
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 5.9e-201 704.5 519 70.5
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.9e-199 699.5 517 69.4
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 8.8e-197 690.6 523 68.6
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 3.2e-178 629.0 523 66.3
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 4.3e-167 592.0 449 69.7
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 4.0e-157 558.9 449 67.0
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 2.7e-145 519.6 526 55.5
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.0e-144 517.7 537 55.3
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.3e-144 516.5 522 54.6
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 4.8e-142 508.8 522 53.8
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 3.1e-141 506.1 520 54.2
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 3.1e-141 506.1 525 54.1
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 6.4e-139 498.4 523 53.3
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.7e-137 493.0 528 52.7
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 3.5e-137 492.7 465 57.0
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 6.0e-137 491.9 519 52.4
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 1.0e-136 491.1 520 52.1
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 9.6e-135 484.6 520 51.5
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.8e-133 480.3 522 51.9
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 5.8e-132 475.3 519 49.3
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 1.4e-130 470.7 515 50.9
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 3.0e-128 463.0 523 49.7
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 5.1e-128 462.2 521 52.4
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 2.5e-127 459.9 523 51.6
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 4.8e-126 455.7 521 51.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 4.8e-126 455.7 521 51.4
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.1e-125 454.5 536 50.7
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 2.6e-124 449.9 518 47.7
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.3e-123 447.6 484 51.0
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 8.4e-123 444.9 516 48.6
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 4.6e-121 439.1 656 43.0
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 2.3e-120 436.8 521 48.4
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 9.6e-119 431.4 477 50.1
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 1.2e-116 424.5 518 47.9
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 2.2e-115 420.2 493 48.1
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 3.8e-115 419.5 518 47.7
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 2.3e-112 410.2 415 51.3
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 8.7e-112 408.3 889 34.5
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 1.5e-111 407.5 526 44.7
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 3.3e-111 406.4 519 47.6
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 2.2e-110 403.7 514 46.9
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 4.8e-110 402.5 525 45.1
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.0e-108 397.1 525 46.5
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 8.5e-107 391.7 518 45.8
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.5e-106 389.0 474 46.8
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 2.3e-104 383.6 515 46.0
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 5.7e-103 379.0 520 44.6
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 5.7e-103 379.0 516 45.0
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 1.7e-102 377.5 513 44.4
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 2.2e-102 377.1 520 43.3
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.1e-101 374.8 513 43.7
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 3.4e-100 369.8 540 43.0
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 3.4e-100 369.8 464 48.5
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 5.9e-100 369.0 344 57.0
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 4.2e-98 362.8 522 44.4
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 5.5e-98 362.5 526 44.5
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 2.3e-96 357.1 524 44.1
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 3.0e-96 356.7 527 43.1
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 3.0e-96 356.7 525 43.4
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 1.5e-95 354.4 525 43.6
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 7.4e-95 352.1 526 43.7
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 2.2e-94 350.5 523 43.0
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.1e-93 348.2 515 41.7
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 7.0e-93 345.5 525 42.9
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.7e-91 340.9 656 37.7
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 6.5e-91 339.0 529 40.8
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 4.2e-90 336.3 534 38.6
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 9.4e-90 335.1 470 42.8
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 2.3e-88 330.5 525 41.3
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 4.8e-86 322.8 415 45.3
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 8.2e-86 322.0 522 37.2
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 2.2e-83 313.9 526 37.3
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 6.5e-83 312.4 513 40.2
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.0e-80 305.1 413 45.8
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 9.8e-79 298.5 366 47.5
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 1.2e-76 291.6 367 46.0
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 2.2e-75 287.3 273 57.5
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 5.0e-75 286.2 410 42.9
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 3.5e-68 263.5 450 39.3
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 2.1e-65 254.2 484 38.0
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 8.9e-64 248.8 354 42.9
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 2.6e-63 247.3 554 33.9
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 6.4e-62 242.7 323 46.4
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 8.6e-51 205.7 341 42.5
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 2.8e-49 200.7 470 32.8
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.8e-48 198.0 248 47.6
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 2.3e-48 197.6 540 29.1
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 9.2e-45 185.7 289 42.2
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 1.2e-44 185.3 336 37.2
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 2.0e-39 167.9 171 53.2
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 7.1e-37 159.5 148 56.1
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 2.7e-36 157.5 133 60.2
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 8.6e-35 152.5 292 35.3
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 2.5e-34 151.0 274 39.4
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 9.6e-34 149.1 285 38.2
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.2e-33 148.7 114 64.0
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 1.7e-27 128.3 562 25.3
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 1.9e-26 124.8 529 25.5
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 5.6e-26 123.2 102 57.8
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 5.6e-26 123.2 193 35.8
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 6.2e-25 119.8 139 48.9
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 1.1e-24 119.0 70 80.0
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 3.1e-24 117.5 214 39.3
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 1.7e-22 111.7 131 45.0
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 2.1e-20 104.8 173 37.0
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 5.8e-15 86.7 267 33.0
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 6.7e-11 73.2 136 33.8
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 1.5e-10 72.0 137 38.0
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 1.5e-10 72.0 137 38.0
Atru.chr3.3228 Acer truncatum HOM05D000154 ORTHO05D000092 4.3e-10 70.5 61 49.2
CiPaw.09G139700 Carya illinoinensis HOM05D005725 ORTHO05D007531 4.3e-10 70.5 141 37.6
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 1.6e-09 68.6 144 36.1
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 2.8e-09 67.8 124 34.7
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 1.3e-06 58.9 123 32.5
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 1.3e-06 58.9 123 32.5
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 1.3e-06 58.9 123 32.5
Gohir.A08G150800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.2e-06 58.2 95 41.1
Cpa.g.c41422 Carica papaya HOM05D005725 ORTHO05D007531 3.8e-06 57.4 43 55.8
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 8.4e-06 56.2 98 41.8


User provided reference genes

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