Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 7.7e-227 790.0 372 100.0
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 2.2e-141 506.1 317 79.5
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 2.8e-59 233.4 307 45.6
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 4.0e-58 229.6 291 46.7
Lj5g0003869 Lotus japonicus HOM05D003035 ORTHO05D006294 2.6e-57 226.9 318 42.1
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 5.8e-49 199.1 329 41.0
Lj6g0012480 Lotus japonicus HOM05D003035 ORTHO05D006294 1.7e-48 197.6 277 41.9
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 1.3e-45 188.0 335 36.7
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-42 178.3 339 35.7
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 1.8e-42 177.6 294 38.4
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 1.2e-38 164.9 359 34.8
Medtr2g020100 Medicago truncatula HOM05D003035 ORTHO05D000440 3.6e-38 163.3 314 35.4
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 3.9e-37 159.8 321 36.4
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-36 158.3 315 33.3
Lj6g0012545 Lotus japonicus HOM05D003035 ORTHO05D006294 2.6e-33 147.1 259 39.4
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.0e-32 142.9 301 31.6
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 4.2e-31 139.8 305 31.5
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 3.6e-30 136.7 311 31.5
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 3.7e-27 126.7 324 32.7
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 3.7e-27 126.7 324 32.7
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 4.1e-26 123.2 338 31.7
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 4.1e-26 123.2 325 30.5
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 4.5e-25 119.8 313 29.1
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 8.5e-24 115.5 342 27.5
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 3.7e-19 100.1 306 28.4
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 7.0e-18 95.9 312 24.7
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 9.1e-18 95.5 338 27.8
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-17 94.7 335 26.0
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.6e-17 94.7 294 25.9
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 2.6e-17 94.0 326 25.5
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 2.6e-17 94.0 208 28.4
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 3.5e-17 93.6 345 23.5
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.9e-17 92.8 298 25.2
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.9e-17 92.8 294 25.9
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.0e-16 92.0 303 26.4
PSO339G4508 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-16 91.7 349 25.5
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 3.8e-16 90.1 318 28.6
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 3.8e-16 90.1 248 28.6
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 1.9e-15 87.8 353 24.6
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 1.9e-15 87.8 377 24.1
ECA247G0747 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.5e-15 87.4 299 27.8
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 4.2e-15 86.7 353 24.1
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 4.2e-15 86.7 312 24.4
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-14 85.1 336 25.9
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.1e-14 84.3 295 25.1
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 2.1e-14 84.3 294 23.8
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 2.1e-14 84.3 187 33.2
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 1.4e-13 81.6 286 25.9
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.2e-13 79.7 275 28.0
Os09g0384900 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D006294 1.5e-12 78.2 292 24.0
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.5e-12 78.2 292 26.0
HanXRQChr01g0025311 Helianthus annuus HOM05D008265 ORTHO05D000440 3.3e-12 77.0 293 26.3
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 5.7e-12 76.3 373 23.9
Rhsim08G0205000 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.7e-12 76.3 265 26.8
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 9.7e-12 75.5 290 23.1
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.3e-11 75.1 273 26.0
QL08p010303 Quercus lobata HOM05D003035 ORTHO05D006294 4.8e-11 73.2 202 25.2
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.2e-11 72.4 298 23.8
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-10 72.0 302 23.8
Rhsim08G0204600 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.3e-10 69.7 264 25.4
Rhsim08G0205300 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.3e-10 69.7 264 25.8
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 5.3e-10 69.7 163 30.7
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 9.1e-10 68.9 227 26.9
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 1.2e-09 68.6 308 22.1
ECA248G3255 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.2e-09 68.6 299 25.8
PSO210G0201 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-09 68.2 333 21.3
PSO478G3996 Papaver somniferum HOM05D003035 ORTHO05D006294 5.9e-09 66.2 365 21.9
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.9e-09 66.2 292 23.3
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 1.0e-08 65.5 149 29.5
Thecc.07G034700 Theobroma cacao HOM05D003035 ORTHO05D006294 1.7e-08 64.7 205 27.3
Rhsim01G0011200 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.0e-08 63.2 262 25.6
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 6.5e-08 62.8 260 22.7
PSO478G2076 Papaver somniferum HOM05D003035 ORTHO05D000440 8.5e-08 62.4 230 24.3
TWI38G0420 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 1.1e-07 62.0 210 27.1
PSO832G1081 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-07 60.8 101 32.7
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 3.2e-07 60.5 265 25.7
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 5.5e-07 59.7 138 29.0
Rhsim01G0011000 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.4e-07 58.9 272 25.0
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.4e-07 58.9 265 25.7


User provided reference genes

Program Settings