Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 3.4e-71 271.6 135 100.0
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 2.9e-62 241.9 135 89.6
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 2.9e-62 241.9 135 88.1
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 3.7e-62 241.5 135 88.9
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 8.3e-62 240.4 135 87.4
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 1.1e-61 240.0 135 88.1
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 1.4e-61 239.6 135 87.4
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 7.0e-61 237.3 132 88.6
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 9.2e-61 236.9 135 86.7
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 3.3e-58 228.4 135 85.2
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 7.5e-55 217.2 132 82.6
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 1.4e-53 213.0 132 81.1
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 2.7e-52 208.8 133 78.9
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 4.6e-52 208.0 135 76.3
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 7.8e-52 207.2 132 78.0
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 1.3e-51 206.5 132 78.0
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 1.3e-51 206.5 132 78.0
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 2.3e-51 205.7 132 78.0
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 1.1e-50 203.4 132 77.3
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 1.9e-50 202.6 132 75.8
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 2.5e-50 202.2 135 74.1
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 5.6e-50 201.1 132 76.5
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 9.5e-50 200.3 132 76.5
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 9.5e-50 200.3 130 77.7
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 1.2e-49 199.9 131 72.5
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 1.6e-49 199.5 119 80.7
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 2.8e-49 198.7 134 73.9
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 2.8e-49 198.7 119 80.7
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 2.8e-49 198.7 135 74.8
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 4.7e-49 198.0 135 75.6
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 4.7e-49 198.0 132 74.2
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 4.7e-49 198.0 133 74.4
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 6.2e-49 197.6 135 74.1
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 6.2e-49 197.6 132 73.5
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 6.2e-49 197.6 135 71.9
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 8.1e-49 197.2 133 73.7
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 1.1e-48 196.8 130 74.6
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 1.1e-48 196.8 134 74.6
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 1.1e-48 196.8 134 73.9
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 1.1e-48 196.8 134 73.9
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 1.4e-48 196.4 128 75.8
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 1.4e-48 196.4 134 72.4
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 2.3e-48 195.7 129 75.2
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 2.3e-48 195.7 128 73.4
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 2.3e-48 195.7 135 74.8
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 5.2e-48 194.5 122 74.6
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 5.2e-48 194.5 131 75.6
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 8.9e-48 193.7 131 74.8
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 1.2e-47 193.4 132 72.0
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 3.4e-47 191.8 132 72.0
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 3.4e-47 191.8 121 76.9
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 1.7e-46 189.5 132 71.2
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 2.2e-46 189.1 133 70.7
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 2.2e-46 189.1 133 70.7
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 2.9e-46 188.7 126 73.0
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 2.9e-46 188.7 126 73.0
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 3.7e-46 188.3 132 71.2
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 6.4e-46 187.6 124 75.0
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 6.4e-46 187.6 141 67.4
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 2.4e-45 185.7 126 71.4
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 2.4e-45 185.7 130 70.0
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 2.4e-45 185.7 107 83.2
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 3.2e-45 185.3 165 59.4
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 5.4e-45 184.5 130 70.8
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 7.1e-45 184.1 107 82.2
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 1.2e-44 183.3 107 84.1
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 3.5e-44 181.8 107 82.2
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 4.6e-44 181.4 129 69.0
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 6.0e-44 181.0 130 66.9
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 6.0e-44 181.0 127 69.3
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 1.0e-43 180.3 126 71.4
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 1.0e-43 180.3 126 69.8
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 1.0e-43 180.3 107 80.4
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 1.3e-43 179.9 127 70.9
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 1.7e-43 179.5 130 67.7
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 3.9e-43 178.3 107 81.3
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 3.9e-43 178.3 133 66.9
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 8.6e-43 177.2 130 66.9
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 1.5e-42 176.4 130 66.9
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 1.5e-42 176.4 130 66.9
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 1.5e-42 176.4 107 79.4
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 1.5e-42 176.4 107 78.5
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 1.9e-42 176.0 132 67.4
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 2.5e-42 175.6 107 79.4
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 5.6e-42 174.5 107 77.6
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 6.2e-41 171.0 106 77.4
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 1.4e-40 169.9 115 73.0
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 5.8e-39 164.5 107 72.0
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 7.6e-39 164.1 96 86.5
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 3.4e-31 138.7 85 83.5
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 2.2e-30 136.0 140 48.6
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 1.1e-29 133.7 102 58.8
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 9.3e-29 130.6 95 66.3
Dinv25701 Davidia involucrata HOM05D006998 ORTHO05D008733 3.5e-28 128.6 72 83.3
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 1.7e-27 126.3 115 64.3
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 1.7e-27 126.3 115 64.3
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 1.1e-26 123.6 89 76.4
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 1.9e-26 122.9 104 54.8
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 2.5e-26 122.5 83 75.9
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 9.6e-26 120.6 89 68.5
DCAR_011285 Daucus carota HOM05D006998 ORTHO05D008733 1.6e-25 119.8 71 78.9
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 2.2e-22 109.4 86 69.8
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 2.9e-22 109.0 81 69.1
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 3.8e-22 108.6 81 67.9
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 4.9e-22 108.2 82 67.1
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 6.4e-22 107.8 74 73.0
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 6.4e-22 107.8 87 66.7
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 1.4e-21 106.7 98 46.9
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 4.2e-21 105.1 87 63.2
Sed0022519 Sechium edule HOM05D006998 ORTHO05D008733 9.6e-18 94.0 47 87.2
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 9.9e-15 84.0 61 68.9
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 1.4e-13 80.1 61 67.2
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 3.2e-13 79.0 61 65.6
BcaB01g01217 Brassica carinata HOM05D006998 ORTHO05D008733 7.1e-13 77.8 72 56.9
Cre09.g413300 Chlamydomonas reinhardtii HOM05D006998 ORTHO05D008733 1.0e-11 73.9 57 54.4
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 3.0e-11 72.4 67 58.2
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 6.7e-11 71.2 78 51.3
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 1.8e-08 63.2 61 52.5
Pp3c11_10070 Physcomitrium patens HOM05D006998 ORTHO05D008733 8.4e-06 54.3 37 62.2


User provided reference genes

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