Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 1.4e-86 322.8 152 100.0
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 1.3e-68 263.1 152 81.6
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.5e-67 259.6 152 82.2
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 6.3e-66 254.2 152 80.3
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.1e-65 253.4 152 80.9
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.4e-65 253.1 152 81.6
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 1.4e-65 253.1 152 80.3
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 4.5e-64 248.1 147 81.0
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 3.8e-63 245.0 152 78.3
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 5.0e-63 244.6 152 78.3
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 1.9e-62 242.7 152 79.6
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 2.5e-62 242.3 152 73.7
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 9.3e-62 240.4 152 75.7
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.7e-61 238.8 152 73.7
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 2.7e-61 238.8 152 73.7
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 6.1e-61 237.7 150 74.0
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 6.1e-61 237.7 152 75.7
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 1.0e-60 236.9 151 72.8
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 2.3e-60 235.7 152 73.7
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 8.7e-60 233.8 152 72.4
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 8.7e-60 233.8 152 75.0
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 1.5e-59 233.0 152 75.0
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 1.9e-59 232.6 152 75.7
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 9.7e-59 230.3 153 73.2
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 2.8e-58 228.8 153 70.6
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 3.7e-58 228.4 152 71.1
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 6.3e-58 227.6 152 71.7
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 8.2e-58 227.3 154 72.1
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.1e-57 226.9 151 72.8
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.4e-57 226.5 152 71.7
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 3.1e-57 225.3 152 71.7
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 3.1e-57 225.3 151 70.9
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 3.1e-57 225.3 152 71.1
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 4.1e-57 224.9 144 72.9
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.5e-56 223.0 152 69.7
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.5e-56 223.0 152 69.7
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 2.6e-56 222.2 153 68.6
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 2.6e-56 222.2 153 68.6
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 3.4e-56 221.9 153 68.0
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 4.5e-56 221.5 152 66.4
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 5.9e-56 221.1 152 68.4
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 5.9e-56 221.1 153 68.0
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 1.0e-55 220.3 156 66.7
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 1.3e-55 219.9 150 69.3
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 8.5e-55 217.2 153 68.6
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 8.5e-55 217.2 152 68.4
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 1.1e-54 216.9 152 69.7
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.4e-54 216.5 154 71.4
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 4.2e-54 214.9 152 66.4
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 4.2e-54 214.9 148 70.9
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 5.5e-54 214.5 152 69.1
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 9.4e-54 213.8 152 66.4
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 1.2e-53 213.4 152 66.4
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 1.6e-53 213.0 152 68.4
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 2.1e-53 212.6 152 69.1
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 6.1e-53 211.1 148 69.6
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.4e-52 209.9 144 68.1
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.1e-51 206.8 148 65.5
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.7e-50 203.0 159 63.5
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 1.7e-50 203.0 152 65.1
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 1.4e-49 199.9 148 65.5
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 1.8e-49 199.5 148 65.5
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 1.8e-49 199.5 157 62.4
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 5.3e-49 198.0 148 64.9
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 9.1e-49 197.2 156 60.9
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 2.2e-47 192.6 144 66.0
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 3.8e-47 191.8 148 61.5
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 5.0e-47 191.4 144 65.3
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.4e-46 189.9 152 63.8
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 2.7e-45 185.7 133 65.4
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 2.3e-44 182.6 132 66.7
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.3e-42 176.8 151 57.6
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 1.8e-41 172.9 150 57.3
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 4.1e-41 171.8 136 62.5
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 3.6e-37 158.7 147 55.1
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 6.1e-37 157.9 149 54.4
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 1.8e-36 156.4 147 53.7
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 1.8e-36 156.4 147 53.7
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 1.8e-36 156.4 147 53.7
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 3.0e-36 155.6 147 53.7
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 3.0e-36 155.6 147 53.7
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 3.0e-36 155.6 147 53.7
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 3.0e-36 155.6 147 54.4
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 5.2e-36 154.8 149 53.7
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 6.7e-36 154.5 141 53.9
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 8.8e-36 154.1 146 53.4
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 4.4e-35 151.8 153 51.6
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 7.5e-35 151.0 115 61.7
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.1e-30 137.1 141 48.9
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 4.7e-29 131.7 129 51.2
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 4.0e-28 128.6 141 46.1
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 2.2e-26 122.9 84 69.0
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 7.2e-22 107.8 64 81.2
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 6.1e-21 104.8 87 60.9
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 3.7e-18 95.5 71 69.0
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 7.0e-17 91.3 62 64.5
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.8e-15 85.5 119 35.3
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 5.0e-15 85.1 119 37.0


User provided reference genes

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